RNA–Protein interactions for RNA: ENST00000563919.1

SCAPER-209, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 4

Gene SCAPER, Length 641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-209ENST00000563919 NISCHQ9Y2I1 1504 aa37.61■■■■□ 3.61
SCAPER-209ENST00000563919 ABCC9O60706 1549 aa34.4■■■■□ 3.1
SCAPER-209ENST00000563919 CCDC180Q9P1Z9 1646 aa33.9■■■■□ 3.02
SCAPER-209ENST00000563919 DNAJC5BQ9UF47 199 aa32.76■■■□□ 2.83
SCAPER-209ENST00000563919 RB1CC1Q8TDY2 1594 aa32.52■■■□□ 2.8
SCAPER-209ENST00000563919 NACADO15069 1562 aa32.2■■■□□ 2.75
SCAPER-209ENST00000563919 PABPN1Q86U42 306 aaKnown RBP eCLIP32■■■□□ 2.71
SCAPER-209ENST00000563919 DCAF8L2P0C7V8 631 aa31.97■■■□□ 2.71
SCAPER-209ENST00000563919 UNC13AQ9UPW8 1703 aa31.78■■■□□ 2.68
SCAPER-209ENST00000563919 MYO15BQ96JP2 1530 aa31.62■■■□□ 2.65
SCAPER-209ENST00000563919 BICRAQ9NZM4 1560 aa31.62■■■□□ 2.65
SCAPER-209ENST00000563919 SHROOM4Q9ULL8 1493 aa31.13■■■□□ 2.57
SCAPER-209ENST00000563919 ZCCHC6Q5VYS8 1495 aaKnown RBP31.06■■■□□ 2.56
SCAPER-209ENST00000563919 CECR2Q9BXF3 1484 aa31.05■■■□□ 2.56
SCAPER-209ENST00000563919 CC2D2AQ9P2K1 1620 aa31.05■■■□□ 2.56
SCAPER-209ENST00000563919 DCAF1Q9Y4B6 1507 aa31.04■■■□□ 2.56
SCAPER-209ENST00000563919 SCRIBQ14160 1630 aa30.87■■■□□ 2.53
SCAPER-209ENST00000563919 EIF4G1Q04637 1599 aaKnown RBP30.87■■■□□ 2.53
SCAPER-209ENST00000563919 DNAJC5Q9H3Z4 198 aa30.42■■■□□ 2.46
SCAPER-209ENST00000563919 CUX2O14529 1486 aa29.85■■■□□ 2.37
SCAPER-209ENST00000563919 NCAPD3P42695 1498 aa29.76■■■□□ 2.35
SCAPER-209ENST00000563919 ERCC6Q03468 1493 aa29.73■■■□□ 2.35
SCAPER-209ENST00000563919 ATAD2BQ9ULI0 1458 aa29.6■■■□□ 2.33
SCAPER-209ENST00000563919 SMARCA2P51531 1590 aa29.47■■■□□ 2.31
SCAPER-209ENST00000563919 HMGXB3Q12766 1538 aa29.46■■■□□ 2.31
SCAPER-209ENST00000563919 NESP48681 1621 aa29.43■■■□□ 2.3
SCAPER-209ENST00000563919 SMARCA4P51532 1647 aa29.42■■■□□ 2.3
SCAPER-209ENST00000563919 BAZ1BQ9UIG0 1483 aaKnown RBP29.26■■■□□ 2.27
SCAPER-209ENST00000563919 BAZ1AQ9NRL2 1556 aaPredicted RBP29.21■■■□□ 2.27
SCAPER-209ENST00000563919 THOC2Q8NI27 1593 aaKnown RBP29.19■■■□□ 2.26
SCAPER-209ENST00000563919 PEG3Q9GZU2 1588 aa29.16■■■□□ 2.26
SCAPER-209ENST00000563919 LAMC3Q9Y6N6 1575 aa29.13■■■□□ 2.25
SCAPER-209ENST00000563919 PDS5BQ9NTI5 1447 aa29.01■■■□□ 2.23
SCAPER-209ENST00000563919 KIF21AQ7Z4S6 1674 aa28.99■■■□□ 2.23
SCAPER-209ENST00000563919 MROH2BQ7Z745 1585 aa28.97■■■□□ 2.23
SCAPER-209ENST00000563919 TRIM41Q8WV44 630 aa28.85■■■□□ 2.21
SCAPER-209ENST00000563919 CADPSQ9ULU8 1353 aa28.85■■■□□ 2.21
SCAPER-209ENST00000563919 MRC2Q9UBG0 1479 aa28.76■■■□□ 2.19
SCAPER-209ENST00000563919 WDR62O43379 1518 aa28.7■■■□□ 2.19
SCAPER-209ENST00000563919 WIZO95785 1651 aa28.59■■■□□ 2.17
SCAPER-209ENST00000563919 CEP164Q9UPV0 1460 aa28.54■■■□□ 2.16
SCAPER-209ENST00000563919 FANCD2Q9BXW9 1451 aa28.49■■■□□ 2.15
SCAPER-209ENST00000563919 OSCARQ8IYS5 282 aa28.45■■■□□ 2.14
SCAPER-209ENST00000563919 CFTRP13569 1480 aa28.4■■■□□ 2.14
SCAPER-209ENST00000563919 URB2Q14146 1524 aaKnown RBP28.29■■■□□ 2.12
SCAPER-209ENST00000563919 RSF1Q96T23 1441 aaPredicted RBP28.23■■■□□ 2.11
SCAPER-209ENST00000563919 TOP2AP11388 1531 aaKnown RBP28.19■■■□□ 2.1
SCAPER-209ENST00000563919 RIMBP3CA6NJZ7 1639 aa28.07■■■□□ 2.08
SCAPER-209ENST00000563919 RIMBP3BA6NNM3 1639 aa28.07■■■□□ 2.08
SCAPER-209ENST00000563919 RIMBP3Q9UFD9 1639 aa28.07■■■□□ 2.08
SCAPER-209ENST00000563919 ZNF608Q9ULD9 1512 aaPredicted RBP28.02■■■□□ 2.08
SCAPER-209ENST00000563919 IFT140Q96RY7 1462 aa28.01■■■□□ 2.07
SCAPER-209ENST00000563919 PRDM2Q13029 1718 aa28.01■■■□□ 2.07
SCAPER-209ENST00000563919 ARHGEF11O15085 1522 aa27.94■■■□□ 2.06
SCAPER-209ENST00000563919 CCDC88BA6NC98 1476 aa27.92■■■□□ 2.06
SCAPER-209ENST00000563919 TOPBP1Q92547 1522 aa27.9■■■□□ 2.06
SCAPER-209ENST00000563919 CYB5RLQ6IPT4 315 aa27.81■■■□□ 2.04
SCAPER-209ENST00000563919 ABCC8Q09428 1581 aa27.81■■■□□ 2.04
SCAPER-209ENST00000563919 EIF4G3O43432 1585 aaKnown RBP27.8■■■□□ 2.04
SCAPER-209ENST00000563919 DNMBPQ6XZF7 1577 aa27.73■■■□□ 2.03
SCAPER-209ENST00000563919 AQRO60306 1485 aaKnown RBP eCLIP27.72■■■□□ 2.03
SCAPER-209ENST00000563919 TARBP1Q13395 1621 aaKnown RBP27.68■■■□□ 2.02
SCAPER-209ENST00000563919 CHD1O14646 1710 aa27.67■■■□□ 2.02
SCAPER-209ENST00000563919 ARAP1Q96P48 1450 aa27.65■■■□□ 2.02
SCAPER-209ENST00000563919 TRHP20396 242 aaPredicted RBP27.63■■■□□ 2.01
SCAPER-209ENST00000563919 FBLN2P98095 1184 aa27.63■■■□□ 2.01
SCAPER-209ENST00000563919 POLA1P09884 1462 aaPredicted RBP27.58■■■□□ 2.01
SCAPER-209ENST00000563919 RAD54L2Q9Y4B4 1467 aa27.51■■□□□ 1.99
SCAPER-209ENST00000563919 TDRD9Q8NDG6 1382 aaKnown RBP27.48■■□□□ 1.99
SCAPER-209ENST00000563919 SOGA1O94964 1423 aa27.47■■□□□ 1.99
SCAPER-209ENST00000563919 SNAPC4Q5SXM2 1469 aa27.39■■□□□ 1.98
SCAPER-209ENST00000563919 CLASP1Q7Z460 1538 aa27.38■■□□□ 1.97
SCAPER-209ENST00000563919 CHMP7Q8WUX9 453 aaPredicted RBP27.37■■□□□ 1.97
SCAPER-209ENST00000563919 WDR97A6NE52 1622 aa27.35■■□□□ 1.97
SCAPER-209ENST00000563919 FGD5Q6ZNL6 1462 aa27.33■■□□□ 1.97
SCAPER-209ENST00000563919 MAGI1Q96QZ7 1491 aaPredicted RBP27.31■■□□□ 1.96
SCAPER-209ENST00000563919 SYNJ1O43426 1573 aa27.31■■□□□ 1.96
SCAPER-209ENST00000563919 GRIN2BQ13224 1484 aa27.26■■□□□ 1.95
SCAPER-209ENST00000563919 CUX1P39880 1505 aa27.25■■□□□ 1.95
SCAPER-209ENST00000563919 SYNJ2O15056 1496 aa27.23■■□□□ 1.95
SCAPER-209ENST00000563919 AEBP2Q6ZN18 517 aaPredicted RBP27.16■■□□□ 1.94
SCAPER-209ENST00000563919 GAPVD1Q14C86 1478 aa27.13■■□□□ 1.93
SCAPER-209ENST00000563919 PBRM1Q86U86 1689 aa27.08■■□□□ 1.92
SCAPER-209ENST00000563919 ABCA10Q8WWZ4 1543 aa27.01■■□□□ 1.91
SCAPER-209ENST00000563919 ABCA5Q8WWZ7 1642 aa26.99■■□□□ 1.91
SCAPER-209ENST00000563919 ERCC6L2Q5T890 1561 aa26.93■■□□□ 1.9
SCAPER-209ENST00000563919 GRIN2AQ12879 1464 aa26.91■■□□□ 1.9
SCAPER-209ENST00000563919 NUP160Q12769 1436 aa26.85■■□□□ 1.89
SCAPER-209ENST00000563919 CEP170Q5SW79 1584 aa26.84■■□□□ 1.89
SCAPER-209ENST00000563919 WRNQ14191 1432 aaPredicted RBP eCLIP26.82■■□□□ 1.88
SCAPER-209ENST00000563919 ADAMTS12P58397 1594 aa26.81■■□□□ 1.88
SCAPER-209ENST00000563919 SHROOM2Q13796 1616 aa26.76■■□□□ 1.87
SCAPER-209ENST00000563919 FHAD1B1AJZ9 1412 aa26.75■■□□□ 1.87
SCAPER-209ENST00000563919 TOP2BQ02880 1626 aa26.68■■□□□ 1.86
SCAPER-209ENST00000563919 ERICH3Q5RHP9 1530 aa26.66■■□□□ 1.86
SCAPER-209ENST00000563919 BIVM-ERCC5R4GMW8 1640 aa26.66■■□□□ 1.86
SCAPER-209ENST00000563919 KIF13AQ9H1H9 1805 aa26.65■■□□□ 1.86
SCAPER-209ENST00000563919 PRG4Q92954 1404 aaPredicted RBP26.64■■□□□ 1.85
SCAPER-209ENST00000563919 SUPT5HO00267 1087 aaKnown RBP26.63■■□□□ 1.85
SCAPER-209ENST00000563919 JPH4Q96JJ6 628 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 255.6 ms