RNA–Protein interactions for RNA: ENST00000563895.1

ULK4P3-201, Transcript of ULK4 pseudogene 3, humanhuman

BASIC

Gene ULK4P3, Length 440 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ULK4P3-201ENST00000563895 NISCHQ9Y2I1 1504 aa21.54■■□□□ 1.04
ULK4P3-201ENST00000563895 ABCC9O60706 1549 aa20.77■□□□□ 0.92
ULK4P3-201ENST00000563895 DNAJC5BQ9UF47 199 aa20.31■□□□□ 0.84
ULK4P3-201ENST00000563895 CCDC180Q9P1Z9 1646 aa19.76■□□□□ 0.75
ULK4P3-201ENST00000563895 DNAJC5Q9H3Z4 198 aa19.33■□□□□ 0.68
ULK4P3-201ENST00000563895 RB1CC1Q8TDY2 1594 aa19.28■□□□□ 0.68
ULK4P3-201ENST00000563895 PABPN1Q86U42 306 aaKnown RBP eCLIP19.17■□□□□ 0.66
ULK4P3-201ENST00000563895 NACADO15069 1562 aa18.89■□□□□ 0.62
ULK4P3-201ENST00000563895 UNC13AQ9UPW8 1703 aa18.88■□□□□ 0.61
ULK4P3-201ENST00000563895 CECR2Q9BXF3 1484 aa18.78■□□□□ 0.6
ULK4P3-201ENST00000563895 BICRAQ9NZM4 1560 aa18.76■□□□□ 0.59
ULK4P3-201ENST00000563895 CC2D2AQ9P2K1 1620 aa18.69■□□□□ 0.58
ULK4P3-201ENST00000563895 DCAF8L2P0C7V8 631 aa18.67■□□□□ 0.58
ULK4P3-201ENST00000563895 EIF4G1Q04637 1599 aaKnown RBP18.38■□□□□ 0.53
ULK4P3-201ENST00000563895 SHROOM4Q9ULL8 1493 aa18.35■□□□□ 0.53
ULK4P3-201ENST00000563895 MYO15BQ96JP2 1530 aa18.26■□□□□ 0.51
ULK4P3-201ENST00000563895 CUX2O14529 1486 aa18.23■□□□□ 0.51
ULK4P3-201ENST00000563895 TRIM41Q8WV44 630 aa18.17■□□□□ 0.5
ULK4P3-201ENST00000563895 AEBP2Q6ZN18 517 aaPredicted RBP18.13■□□□□ 0.49
ULK4P3-201ENST00000563895 SCRIBQ14160 1630 aa18.01■□□□□ 0.47
ULK4P3-201ENST00000563895 ERCC6Q03468 1493 aa18■□□□□ 0.47
ULK4P3-201ENST00000563895 DCAF1Q9Y4B6 1507 aa17.67■□□□□ 0.42
ULK4P3-201ENST00000563895 ZCCHC6Q5VYS8 1495 aaKnown RBP17.65■□□□□ 0.42
ULK4P3-201ENST00000563895 THOC2Q8NI27 1593 aaKnown RBP17.56■□□□□ 0.4
ULK4P3-201ENST00000563895 NESP48681 1621 aa17.55■□□□□ 0.4
ULK4P3-201ENST00000563895 NCAPD3P42695 1498 aa17.44■□□□□ 0.38
ULK4P3-201ENST00000563895 SMARCA2P51531 1590 aa17.41■□□□□ 0.38
ULK4P3-201ENST00000563895 BAZ1AQ9NRL2 1556 aaPredicted RBP17.31■□□□□ 0.36
ULK4P3-201ENST00000563895 KIF21AQ7Z4S6 1674 aa17.3■□□□□ 0.36
ULK4P3-201ENST00000563895 ATAD2BQ9ULI0 1458 aa17.27■□□□□ 0.36
ULK4P3-201ENST00000563895 OSCARQ8IYS5 282 aa17.24■□□□□ 0.35
ULK4P3-201ENST00000563895 HMGXB3Q12766 1538 aa17.24■□□□□ 0.35
ULK4P3-201ENST00000563895 LAMC3Q9Y6N6 1575 aa17.23■□□□□ 0.35
ULK4P3-201ENST00000563895 RIMBP3CA6NJZ7 1639 aa17.18■□□□□ 0.34
ULK4P3-201ENST00000563895 RIMBP3BA6NNM3 1639 aa17.18■□□□□ 0.34
ULK4P3-201ENST00000563895 RIMBP3Q9UFD9 1639 aa17.18■□□□□ 0.34
ULK4P3-201ENST00000563895 PDS5BQ9NTI5 1447 aa17.15■□□□□ 0.34
ULK4P3-201ENST00000563895 TRHP20396 242 aaPredicted RBP17.1■□□□□ 0.33
ULK4P3-201ENST00000563895 MRC2Q9UBG0 1479 aa17.09■□□□□ 0.33
ULK4P3-201ENST00000563895 BAZ1BQ9UIG0 1483 aaKnown RBP17.08■□□□□ 0.32
ULK4P3-201ENST00000563895 WDR62O43379 1518 aa17.07■□□□□ 0.32
ULK4P3-201ENST00000563895 CHIC1Q5VXU3 224 aa17.07■□□□□ 0.32
ULK4P3-201ENST00000563895 SMARCA4P51532 1647 aa17.03■□□□□ 0.32
ULK4P3-201ENST00000563895 ARHGEF11O15085 1522 aa17.01■□□□□ 0.31
ULK4P3-201ENST00000563895 CYB5RLQ6IPT4 315 aa16.94■□□□□ 0.3
ULK4P3-201ENST00000563895 CADPSQ9ULU8 1353 aa16.88■□□□□ 0.29
ULK4P3-201ENST00000563895 PEG3Q9GZU2 1588 aa16.83■□□□□ 0.28
ULK4P3-201ENST00000563895 CEP164Q9UPV0 1460 aa16.83■□□□□ 0.28
ULK4P3-201ENST00000563895 ARAP1Q96P48 1450 aa16.77■□□□□ 0.28
ULK4P3-201ENST00000563895 ILDR1Q86SU0 546 aaPredicted RBP16.74■□□□□ 0.27
ULK4P3-201ENST00000563895 FANCD2Q9BXW9 1451 aa16.73■□□□□ 0.27
ULK4P3-201ENST00000563895 URB2Q14146 1524 aaKnown RBP16.65■□□□□ 0.26
ULK4P3-201ENST00000563895 ZNF608Q9ULD9 1512 aaPredicted RBP16.62■□□□□ 0.25
ULK4P3-201ENST00000563895 MROH2BQ7Z745 1585 aa16.61■□□□□ 0.25
ULK4P3-201ENST00000563895 CHD1O14646 1710 aa16.56■□□□□ 0.24
ULK4P3-201ENST00000563895 RSF1Q96T23 1441 aaPredicted RBP16.55■□□□□ 0.24
ULK4P3-201ENST00000563895 IFT140Q96RY7 1462 aa16.51■□□□□ 0.23
ULK4P3-201ENST00000563895 EIF4G3O43432 1585 aaKnown RBP16.49■□□□□ 0.23
ULK4P3-201ENST00000563895 CFTRP13569 1480 aa16.48■□□□□ 0.23
ULK4P3-201ENST00000563895 FBLN2P98095 1184 aa16.46■□□□□ 0.23
ULK4P3-201ENST00000563895 WIZO95785 1651 aa16.39■□□□□ 0.21
ULK4P3-201ENST00000563895 AQRO60306 1485 aaKnown RBP eCLIP16.34■□□□□ 0.21
ULK4P3-201ENST00000563895 CLASP1Q7Z460 1538 aa16.3■□□□□ 0.2
ULK4P3-201ENST00000563895 TOPBP1Q92547 1522 aa16.3■□□□□ 0.2
ULK4P3-201ENST00000563895 PRDM2Q13029 1718 aa16.28■□□□□ 0.2
ULK4P3-201ENST00000563895 GAPVD1Q14C86 1478 aa16.22■□□□□ 0.19
ULK4P3-201ENST00000563895 SYNJ1O43426 1573 aa16.22■□□□□ 0.19
ULK4P3-201ENST00000563895 TARBP1Q13395 1621 aaKnown RBP16.21■□□□□ 0.19
ULK4P3-201ENST00000563895 KDM4FA0A1W2PPD8 638 aa16.21■□□□□ 0.19
ULK4P3-201ENST00000563895 SNAPC4Q5SXM2 1469 aa16.16■□□□□ 0.18
ULK4P3-201ENST00000563895 ABCC8Q09428 1581 aa16.15■□□□□ 0.18
ULK4P3-201ENST00000563895 DNMBPQ6XZF7 1577 aa16.14■□□□□ 0.17
ULK4P3-201ENST00000563895 CHMP7Q8WUX9 453 aaPredicted RBP16.14■□□□□ 0.17
ULK4P3-201ENST00000563895 KIF13AQ9H1H9 1805 aa16.13■□□□□ 0.17
ULK4P3-201ENST00000563895 TDRD9Q8NDG6 1382 aaKnown RBP16.09■□□□□ 0.17
ULK4P3-201ENST00000563895 TOP2AP11388 1531 aaKnown RBP16.09■□□□□ 0.17
ULK4P3-201ENST00000563895 POLA1P09884 1462 aaPredicted RBP16.07■□□□□ 0.16
ULK4P3-201ENST00000563895 RAD54L2Q9Y4B4 1467 aa16.05■□□□□ 0.16
ULK4P3-201ENST00000563895 MAGI1Q96QZ7 1491 aaPredicted RBP16.03■□□□□ 0.16
ULK4P3-201ENST00000563895 ERCC6L2Q5T890 1561 aa16.02■□□□□ 0.16
ULK4P3-201ENST00000563895 SYNJ2O15056 1496 aa16■□□□□ 0.15
ULK4P3-201ENST00000563895 HECW2Q9P2P5 1572 aa16■□□□□ 0.15
ULK4P3-201ENST00000563895 KDM6BO15054 1643 aa15.97■□□□□ 0.15
ULK4P3-201ENST00000563895 SOGA1O94964 1423 aa15.97■□□□□ 0.15
ULK4P3-201ENST00000563895 FBXO41Q8TF61 875 aa15.96■□□□□ 0.15
ULK4P3-201ENST00000563895 WDR97A6NE52 1622 aa15.94■□□□□ 0.14
ULK4P3-201ENST00000563895 GRIN2BQ13224 1484 aa15.94■□□□□ 0.14
ULK4P3-201ENST00000563895 FAM69CQ0P6D2 419 aa15.93■□□□□ 0.14
ULK4P3-201ENST00000563895 CCDC88BA6NC98 1476 aa15.91■□□□□ 0.14
ULK4P3-201ENST00000563895 ADGRL1O94910 1474 aa15.89■□□□□ 0.13
ULK4P3-201ENST00000563895 LMTK3Q96Q04 1460 aa15.89■□□□□ 0.13
ULK4P3-201ENST00000563895 ABCC10Q5T3U5 1492 aa15.88■□□□□ 0.13
ULK4P3-201ENST00000563895 CEP170Q5SW79 1584 aa15.87■□□□□ 0.13
ULK4P3-201ENST00000563895 PBRM1Q86U86 1689 aa15.86■□□□□ 0.13
ULK4P3-201ENST00000563895 FGD5Q6ZNL6 1462 aa15.84■□□□□ 0.13
ULK4P3-201ENST00000563895 DIP2BQ9P265 1576 aa15.84■□□□□ 0.13
ULK4P3-201ENST00000563895 TSPOAP1O95153 1857 aa15.82■□□□□ 0.12
ULK4P3-201ENST00000563895 SHROOM2Q13796 1616 aa15.76■□□□□ 0.11
ULK4P3-201ENST00000563895 MAPKBP1O60336 1514 aa15.75■□□□□ 0.11
ULK4P3-201ENST00000563895 GRIN2AQ12879 1464 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms