RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 NISCHQ9Y2I1 1504 aa45.44■■■■■ 4.86
SYNGR3-203ENST00000563869 ABCC9O60706 1549 aa41.28■■■■■ 4.2
SYNGR3-203ENST00000563869 CCDC180Q9P1Z9 1646 aa41■■■■■ 4.15
SYNGR3-203ENST00000563869 RB1CC1Q8TDY2 1594 aa39.18■■■■□ 3.86
SYNGR3-203ENST00000563869 DNAJC5BQ9UF47 199 aa39.05■■■■□ 3.84
SYNGR3-203ENST00000563869 NACADO15069 1562 aa38.82■■■■□ 3.81
SYNGR3-203ENST00000563869 DCAF8L2P0C7V8 631 aa38.43■■■■□ 3.74
SYNGR3-203ENST00000563869 PABPN1Q86U42 306 aaKnown RBP eCLIP38.34■■■■□ 3.73
SYNGR3-203ENST00000563869 UNC13AQ9UPW8 1703 aa38.33■■■■□ 3.73
SYNGR3-203ENST00000563869 MYO15BQ96JP2 1530 aa38.18■■■■□ 3.7
SYNGR3-203ENST00000563869 BICRAQ9NZM4 1560 aa38.05■■■■□ 3.68
SYNGR3-203ENST00000563869 ZCCHC6Q5VYS8 1495 aaKnown RBP37.58■■■■□ 3.61
SYNGR3-203ENST00000563869 DCAF1Q9Y4B6 1507 aa37.54■■■■□ 3.6
SYNGR3-203ENST00000563869 SHROOM4Q9ULL8 1493 aa37.52■■■■□ 3.6
SYNGR3-203ENST00000563869 CC2D2AQ9P2K1 1620 aa37.32■■■■□ 3.56
SYNGR3-203ENST00000563869 SCRIBQ14160 1630 aa37.26■■■■□ 3.56
SYNGR3-203ENST00000563869 CECR2Q9BXF3 1484 aa37.25■■■■□ 3.55
SYNGR3-203ENST00000563869 EIF4G1Q04637 1599 aaKnown RBP37.14■■■■□ 3.54
SYNGR3-203ENST00000563869 DNAJC5Q9H3Z4 198 aa36.18■■■■□ 3.38
SYNGR3-203ENST00000563869 NCAPD3P42695 1498 aa35.83■■■■□ 3.33
SYNGR3-203ENST00000563869 CUX2O14529 1486 aa35.79■■■■□ 3.32
SYNGR3-203ENST00000563869 ERCC6Q03468 1493 aa35.67■■■■□ 3.3
SYNGR3-203ENST00000563869 ATAD2BQ9ULI0 1458 aa35.66■■■■□ 3.3
SYNGR3-203ENST00000563869 SMARCA2P51531 1590 aa35.55■■■■□ 3.28
SYNGR3-203ENST00000563869 HMGXB3Q12766 1538 aa35.54■■■■□ 3.28
SYNGR3-203ENST00000563869 SMARCA4P51532 1647 aa35.54■■■■□ 3.28
SYNGR3-203ENST00000563869 NESP48681 1621 aa35.35■■■■□ 3.25
SYNGR3-203ENST00000563869 BAZ1AQ9NRL2 1556 aaPredicted RBP35.3■■■■□ 3.24
SYNGR3-203ENST00000563869 BAZ1BQ9UIG0 1483 aaKnown RBP35.28■■■■□ 3.24
SYNGR3-203ENST00000563869 PEG3Q9GZU2 1588 aa35.22■■■■□ 3.23
SYNGR3-203ENST00000563869 THOC2Q8NI27 1593 aaKnown RBP35.13■■■■□ 3.21
SYNGR3-203ENST00000563869 LAMC3Q9Y6N6 1575 aa35.11■■■■□ 3.21
SYNGR3-203ENST00000563869 MROH2BQ7Z745 1585 aa34.99■■■■□ 3.19
SYNGR3-203ENST00000563869 KIF21AQ7Z4S6 1674 aa34.94■■■■□ 3.18
SYNGR3-203ENST00000563869 PDS5BQ9NTI5 1447 aa34.89■■■■□ 3.18
SYNGR3-203ENST00000563869 CADPSQ9ULU8 1353 aa34.7■■■■□ 3.15
SYNGR3-203ENST00000563869 MRC2Q9UBG0 1479 aa34.6■■■■□ 3.13
SYNGR3-203ENST00000563869 WIZO95785 1651 aa34.57■■■■□ 3.12
SYNGR3-203ENST00000563869 WDR62O43379 1518 aa34.55■■■■□ 3.12
SYNGR3-203ENST00000563869 CEP164Q9UPV0 1460 aa34.39■■■■□ 3.1
SYNGR3-203ENST00000563869 TRIM41Q8WV44 630 aa34.38■■■■□ 3.09
SYNGR3-203ENST00000563869 FANCD2Q9BXW9 1451 aa34.31■■■■□ 3.08
SYNGR3-203ENST00000563869 CFTRP13569 1480 aa34.24■■■■□ 3.07
SYNGR3-203ENST00000563869 RSF1Q96T23 1441 aaPredicted RBP34.2■■■■□ 3.06
SYNGR3-203ENST00000563869 TOP2AP11388 1531 aaKnown RBP34.1■■■■□ 3.05
SYNGR3-203ENST00000563869 URB2Q14146 1524 aaKnown RBP34.05■■■■□ 3.04
SYNGR3-203ENST00000563869 OSCARQ8IYS5 282 aa34.05■■■■□ 3.04
SYNGR3-203ENST00000563869 PRDM2Q13029 1718 aa33.94■■■■□ 3.02
SYNGR3-203ENST00000563869 IFT140Q96RY7 1462 aa33.72■■■□□ 2.99
SYNGR3-203ENST00000563869 CCDC88BA6NC98 1476 aa33.7■■■□□ 2.99
SYNGR3-203ENST00000563869 RIMBP3CA6NJZ7 1639 aa33.68■■■□□ 2.98
SYNGR3-203ENST00000563869 RIMBP3BA6NNM3 1639 aa33.68■■■□□ 2.98
SYNGR3-203ENST00000563869 RIMBP3Q9UFD9 1639 aa33.68■■■□□ 2.98
SYNGR3-203ENST00000563869 ZNF608Q9ULD9 1512 aaPredicted RBP33.68■■■□□ 2.98
SYNGR3-203ENST00000563869 TOPBP1Q92547 1522 aa33.63■■■□□ 2.97
SYNGR3-203ENST00000563869 SUPT5HO00267 1087 aaKnown RBP33.58■■■□□ 2.97
SYNGR3-203ENST00000563869 ABCC8Q09428 1581 aa33.55■■■□□ 2.96
SYNGR3-203ENST00000563869 ARHGEF11O15085 1522 aa33.53■■■□□ 2.96
SYNGR3-203ENST00000563869 EIF4G3O43432 1585 aaKnown RBP33.51■■■□□ 2.96
SYNGR3-203ENST00000563869 DNMBPQ6XZF7 1577 aa33.48■■■□□ 2.95
SYNGR3-203ENST00000563869 TARBP1Q13395 1621 aaKnown RBP33.39■■■□□ 2.93
SYNGR3-203ENST00000563869 CHD1O14646 1710 aa33.36■■■□□ 2.93
SYNGR3-203ENST00000563869 AQRO60306 1485 aaKnown RBP eCLIP33.32■■■□□ 2.92
SYNGR3-203ENST00000563869 CYB5RLQ6IPT4 315 aa33.26■■■□□ 2.91
SYNGR3-203ENST00000563869 POLA1P09884 1462 aaPredicted RBP33.25■■■□□ 2.91
SYNGR3-203ENST00000563869 ARAP1Q96P48 1450 aa33.16■■■□□ 2.9
SYNGR3-203ENST00000563869 FBLN2P98095 1184 aa33.15■■■□□ 2.9
SYNGR3-203ENST00000563869 RAD54L2Q9Y4B4 1467 aa33.12■■■□□ 2.89
SYNGR3-203ENST00000563869 SOGA1O94964 1423 aa33.09■■■□□ 2.89
SYNGR3-203ENST00000563869 WDR97A6NE52 1622 aa33.05■■■□□ 2.88
SYNGR3-203ENST00000563869 TDRD9Q8NDG6 1382 aaKnown RBP33.05■■■□□ 2.88
SYNGR3-203ENST00000563869 TRHP20396 242 aaPredicted RBP33.01■■■□□ 2.87
SYNGR3-203ENST00000563869 FGD5Q6ZNL6 1462 aa32.99■■■□□ 2.87
SYNGR3-203ENST00000563869 SNAPC4Q5SXM2 1469 aa32.98■■■□□ 2.87
SYNGR3-203ENST00000563869 CLASP1Q7Z460 1538 aa32.95■■■□□ 2.87
SYNGR3-203ENST00000563869 MAGI1Q96QZ7 1491 aaPredicted RBP32.91■■■□□ 2.86
SYNGR3-203ENST00000563869 CUX1P39880 1505 aa32.9■■■□□ 2.86
SYNGR3-203ENST00000563869 SYNJ1O43426 1573 aa32.9■■■□□ 2.86
SYNGR3-203ENST00000563869 CHMP7Q8WUX9 453 aaPredicted RBP32.87■■■□□ 2.85
SYNGR3-203ENST00000563869 GRIN2BQ13224 1484 aa32.86■■■□□ 2.85
SYNGR3-203ENST00000563869 SYNJ2O15056 1496 aa32.8■■■□□ 2.84
SYNGR3-203ENST00000563869 PBRM1Q86U86 1689 aa32.74■■■□□ 2.83
SYNGR3-203ENST00000563869 GAPVD1Q14C86 1478 aa32.68■■■□□ 2.82
SYNGR3-203ENST00000563869 ABCA5Q8WWZ7 1642 aa32.61■■■□□ 2.81
SYNGR3-203ENST00000563869 ABCA10Q8WWZ4 1543 aa32.61■■■□□ 2.81
SYNGR3-203ENST00000563869 GRIN2AQ12879 1464 aa32.43■■■□□ 2.78
SYNGR3-203ENST00000563869 ADAMTS12P58397 1594 aa32.38■■■□□ 2.77
SYNGR3-203ENST00000563869 ERCC6L2Q5T890 1561 aa32.38■■■□□ 2.77
SYNGR3-203ENST00000563869 WRNQ14191 1432 aaPredicted RBP eCLIP32.38■■■□□ 2.77
SYNGR3-203ENST00000563869 NUP160Q12769 1436 aa32.34■■■□□ 2.77
SYNGR3-203ENST00000563869 CEP170Q5SW79 1584 aa32.34■■■□□ 2.77
SYNGR3-203ENST00000563869 AEBP2Q6ZN18 517 aaPredicted RBP32.34■■■□□ 2.77
SYNGR3-203ENST00000563869 BIVM-ERCC5R4GMW8 1640 aa32.32■■■□□ 2.76
SYNGR3-203ENST00000563869 TOP2BQ02880 1626 aa32.29■■■□□ 2.76
SYNGR3-203ENST00000563869 SHROOM2Q13796 1616 aa32.28■■■□□ 2.76
SYNGR3-203ENST00000563869 FHAD1B1AJZ9 1412 aa32.26■■■□□ 2.75
SYNGR3-203ENST00000563869 ERICH3Q5RHP9 1530 aa32.2■■■□□ 2.74
SYNGR3-203ENST00000563869 KIF13AQ9H1H9 1805 aa32.07■■■□□ 2.72
SYNGR3-203ENST00000563869 PRG4Q92954 1404 aaPredicted RBP32.04■■■□□ 2.72
SYNGR3-203ENST00000563869 JPH4Q96JJ6 628 aa31.99■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms