RNA–Protein interactions for RNA: ENST00000563848.1

DEF8-213, Transcript of differentially expressed in FDCP 8 homolog, humanhuman

TSL 3

Gene DEF8, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF8-213ENST00000563848 NISCHQ9Y2I1 1504 aa37.45■■■■□ 3.59
DEF8-213ENST00000563848 CCDC180Q9P1Z9 1646 aa33.41■■■□□ 2.94
DEF8-213ENST00000563848 ABCC9O60706 1549 aa32.68■■■□□ 2.82
DEF8-213ENST00000563848 RB1CC1Q8TDY2 1594 aa31.46■■■□□ 2.63
DEF8-213ENST00000563848 NACADO15069 1562 aa31.39■■■□□ 2.61
DEF8-213ENST00000563848 DCAF8L2P0C7V8 631 aa31.29■■■□□ 2.6
DEF8-213ENST00000563848 ZCCHC6Q5VYS8 1495 aaKnown RBP31.19■■■□□ 2.58
DEF8-213ENST00000563848 MYO15BQ96JP2 1530 aa31.14■■■□□ 2.58
DEF8-213ENST00000563848 DCAF1Q9Y4B6 1507 aa30.98■■■□□ 2.55
DEF8-213ENST00000563848 UNC13AQ9UPW8 1703 aa30.79■■■□□ 2.52
DEF8-213ENST00000563848 PABPN1Q86U42 306 aaKnown RBP eCLIP30.48■■■□□ 2.47
DEF8-213ENST00000563848 BICRAQ9NZM4 1560 aa30.46■■■□□ 2.47
DEF8-213ENST00000563848 SCRIBQ14160 1630 aa30.45■■■□□ 2.47
DEF8-213ENST00000563848 SHROOM4Q9ULL8 1493 aa30.18■■■□□ 2.42
DEF8-213ENST00000563848 DNAJC5BQ9UF47 199 aa29.96■■■□□ 2.39
DEF8-213ENST00000563848 EIF4G1Q04637 1599 aaKnown RBP29.69■■■□□ 2.34
DEF8-213ENST00000563848 CC2D2AQ9P2K1 1620 aa29.6■■■□□ 2.33
DEF8-213ENST00000563848 CECR2Q9BXF3 1484 aa29.38■■■□□ 2.29
DEF8-213ENST00000563848 SMARCA4P51532 1647 aa29.12■■■□□ 2.25
DEF8-213ENST00000563848 BAZ1AQ9NRL2 1556 aaPredicted RBP29.06■■■□□ 2.24
DEF8-213ENST00000563848 SMARCA2P51531 1590 aa28.93■■■□□ 2.22
DEF8-213ENST00000563848 ATAD2BQ9ULI0 1458 aa28.92■■■□□ 2.22
DEF8-213ENST00000563848 NCAPD3P42695 1498 aa28.91■■■□□ 2.22
DEF8-213ENST00000563848 MROH2BQ7Z745 1585 aa28.85■■■□□ 2.21
DEF8-213ENST00000563848 HMGXB3Q12766 1538 aa28.82■■■□□ 2.2
DEF8-213ENST00000563848 PEG3Q9GZU2 1588 aa28.81■■■□□ 2.2
DEF8-213ENST00000563848 BAZ1BQ9UIG0 1483 aaKnown RBP28.72■■■□□ 2.19
DEF8-213ENST00000563848 WIZO95785 1651 aa28.58■■■□□ 2.16
DEF8-213ENST00000563848 RSF1Q96T23 1441 aaPredicted RBP28.47■■■□□ 2.15
DEF8-213ENST00000563848 TOP2AP11388 1531 aaKnown RBP28.27■■■□□ 2.12
DEF8-213ENST00000563848 NESP48681 1621 aa28.25■■■□□ 2.11
DEF8-213ENST00000563848 LAMC3Q9Y6N6 1575 aa28.22■■■□□ 2.11
DEF8-213ENST00000563848 ERCC6Q03468 1493 aa28.21■■■□□ 2.11
DEF8-213ENST00000563848 CADPSQ9ULU8 1353 aa28.06■■■□□ 2.08
DEF8-213ENST00000563848 PDS5BQ9NTI5 1447 aa28.01■■■□□ 2.07
DEF8-213ENST00000563848 KIF21AQ7Z4S6 1674 aa28■■■□□ 2.07
DEF8-213ENST00000563848 CUX2O14529 1486 aa27.93■■■□□ 2.06
DEF8-213ENST00000563848 THOC2Q8NI27 1593 aaKnown RBP27.9■■■□□ 2.06
DEF8-213ENST00000563848 CCDC88BA6NC98 1476 aa27.89■■■□□ 2.05
DEF8-213ENST00000563848 CFTRP13569 1480 aa27.89■■■□□ 2.05
DEF8-213ENST00000563848 PRDM2Q13029 1718 aa27.82■■■□□ 2.04
DEF8-213ENST00000563848 FANCD2Q9BXW9 1451 aa27.77■■■□□ 2.04
DEF8-213ENST00000563848 CEP164Q9UPV0 1460 aa27.77■■■□□ 2.04
DEF8-213ENST00000563848 MRC2Q9UBG0 1479 aa27.73■■■□□ 2.03
DEF8-213ENST00000563848 SUPT5HO00267 1087 aaKnown RBP27.69■■■□□ 2.02
DEF8-213ENST00000563848 WDR62O43379 1518 aa27.65■■■□□ 2.02
DEF8-213ENST00000563848 URB2Q14146 1524 aaKnown RBP27.49■■□□□ 1.99
DEF8-213ENST00000563848 ABCC8Q09428 1581 aa27.33■■□□□ 1.97
DEF8-213ENST00000563848 TOPBP1Q92547 1522 aa27.32■■□□□ 1.96
DEF8-213ENST00000563848 DNMBPQ6XZF7 1577 aa27.31■■□□□ 1.96
DEF8-213ENST00000563848 IFT140Q96RY7 1462 aa27.17■■□□□ 1.94
DEF8-213ENST00000563848 CUX1P39880 1505 aa27.09■■□□□ 1.93
DEF8-213ENST00000563848 POLA1P09884 1462 aaPredicted RBP27.08■■□□□ 1.93
DEF8-213ENST00000563848 DNAJC5Q9H3Z4 198 aa27.08■■□□□ 1.93
DEF8-213ENST00000563848 TARBP1Q13395 1621 aaKnown RBP27.04■■□□□ 1.92
DEF8-213ENST00000563848 ZNF608Q9ULD9 1512 aaPredicted RBP27.03■■□□□ 1.92
DEF8-213ENST00000563848 FGD5Q6ZNL6 1462 aa27.01■■□□□ 1.91
DEF8-213ENST00000563848 EIF4G3O43432 1585 aaKnown RBP26.99■■□□□ 1.91
DEF8-213ENST00000563848 SOGA1O94964 1423 aa26.95■■□□□ 1.9
DEF8-213ENST00000563848 RAD54L2Q9Y4B4 1467 aa26.94■■□□□ 1.9
DEF8-213ENST00000563848 WRNQ14191 1432 aaPredicted RBP eCLIP26.88■■□□□ 1.89
DEF8-213ENST00000563848 BIVM-ERCC5R4GMW8 1640 aa26.87■■□□□ 1.89
DEF8-213ENST00000563848 WDR97A6NE52 1622 aa26.87■■□□□ 1.89
DEF8-213ENST00000563848 TOP2BQ02880 1626 aa26.86■■□□□ 1.89
DEF8-213ENST00000563848 AQRO60306 1485 aaKnown RBP eCLIP26.86■■□□□ 1.892e-6■■■■□ 21.1
DEF8-213ENST00000563848 SYNJ1O43426 1573 aa26.84■■□□□ 1.89
DEF8-213ENST00000563848 TDRD9Q8NDG6 1382 aaKnown RBP26.79■■□□□ 1.88
DEF8-213ENST00000563848 ABCA10Q8WWZ4 1543 aa26.74■■□□□ 1.87
DEF8-213ENST00000563848 OSCARQ8IYS5 282 aa26.71■■□□□ 1.87
DEF8-213ENST00000563848 CHD1O14646 1710 aa26.7■■□□□ 1.86
DEF8-213ENST00000563848 PBRM1Q86U86 1689 aa26.7■■□□□ 1.86
DEF8-213ENST00000563848 ABCA5Q8WWZ7 1642 aa26.68■■□□□ 1.86
DEF8-213ENST00000563848 GRIN2BQ13224 1484 aa26.67■■□□□ 1.86
DEF8-213ENST00000563848 GAPVD1Q14C86 1478 aa26.66■■□□□ 1.86
DEF8-213ENST00000563848 SNAPC4Q5SXM2 1469 aa26.65■■□□□ 1.86
DEF8-213ENST00000563848 MAGI1Q96QZ7 1491 aaPredicted RBP26.62■■□□□ 1.85
DEF8-213ENST00000563848 FBLN2P98095 1184 aa26.57■■□□□ 1.84
DEF8-213ENST00000563848 SYNJ2O15056 1496 aa26.5■■□□□ 1.83
DEF8-213ENST00000563848 CHMP7Q8WUX9 453 aaPredicted RBP26.48■■□□□ 1.83
DEF8-213ENST00000563848 ADAMTS12P58397 1594 aa26.44■■□□□ 1.82
DEF8-213ENST00000563848 ERICH3Q5RHP9 1530 aa26.44■■□□□ 1.82
DEF8-213ENST00000563848 RIMBP3CA6NJZ7 1639 aa26.36■■□□□ 1.81
DEF8-213ENST00000563848 RIMBP3BA6NNM3 1639 aa26.36■■□□□ 1.81
DEF8-213ENST00000563848 RIMBP3Q9UFD9 1639 aa26.36■■□□□ 1.81
DEF8-213ENST00000563848 CLASP1Q7Z460 1538 aa26.34■■□□□ 1.81
DEF8-213ENST00000563848 FHAD1B1AJZ9 1412 aa26.34■■□□□ 1.81
DEF8-213ENST00000563848 KIF27Q86VH2 1401 aa26.33■■□□□ 1.81
DEF8-213ENST00000563848 GRIN2AQ12879 1464 aa26.33■■□□□ 1.81
DEF8-213ENST00000563848 ARHGEF11O15085 1522 aa26.33■■□□□ 1.81
DEF8-213ENST00000563848 CUL7Q14999 1698 aa26.23■■□□□ 1.79
DEF8-213ENST00000563848 TRIM41Q8WV44 630 aa26.21■■□□□ 1.79
DEF8-213ENST00000563848 CEP170Q5SW79 1584 aa26.2■■□□□ 1.79
DEF8-213ENST00000563848 NUP160Q12769 1436 aa26.2■■□□□ 1.78
DEF8-213ENST00000563848 IGF1RP08069 1367 aa26.18■■□□□ 1.78
DEF8-213ENST00000563848 ARAP1Q96P48 1450 aa26.1■■□□□ 1.77
DEF8-213ENST00000563848 RUSC2Q8N2Y8 1516 aa26.05■■□□□ 1.76
DEF8-213ENST00000563848 SHROOM2Q13796 1616 aa26.05■■□□□ 1.76
DEF8-213ENST00000563848 CARMIL1Q5VZK9 1371 aa26.05■■□□□ 1.76
DEF8-213ENST00000563848 CYB5RLQ6IPT4 315 aa26.03■■□□□ 1.76
DEF8-213ENST00000563848 ERCC6L2Q5T890 1561 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms