RNA–Protein interactions for RNA: ENST00000563780.1

AC099668.1-201, humanhuman

TSL 2 BASIC

Gene AC099668.1, Length 423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC099668.1-201ENST00000563780 NISCHQ9Y2I1 1504 aa25.11■■□□□ 1.61
AC099668.1-201ENST00000563780 ABCC9O60706 1549 aa22.64■■□□□ 1.21
AC099668.1-201ENST00000563780 CCDC180Q9P1Z9 1646 aa22.33■■□□□ 1.17
AC099668.1-201ENST00000563780 DNAJC5BQ9UF47 199 aa21.49■■□□□ 1.03
AC099668.1-201ENST00000563780 RB1CC1Q8TDY2 1594 aa21.43■■□□□ 1.02
AC099668.1-201ENST00000563780 DCAF8L2P0C7V8 631 aa21.28■■□□□ 1
AC099668.1-201ENST00000563780 NACADO15069 1562 aa21.27■■□□□ 1
AC099668.1-201ENST00000563780 PABPN1Q86U42 306 aaKnown RBP eCLIP21.15■□□□□ 0.982e-17■■■■□ 22.5
AC099668.1-201ENST00000563780 ZCCHC6Q5VYS8 1495 aaKnown RBP21.01■□□□□ 0.95
AC099668.1-201ENST00000563780 MYO15BQ96JP2 1530 aa20.96■□□□□ 0.95
AC099668.1-201ENST00000563780 DCAF1Q9Y4B6 1507 aa20.86■□□□□ 0.93
AC099668.1-201ENST00000563780 BICRAQ9NZM4 1560 aa20.8■□□□□ 0.92
AC099668.1-201ENST00000563780 UNC13AQ9UPW8 1703 aa20.73■□□□□ 0.91
AC099668.1-201ENST00000563780 SHROOM4Q9ULL8 1493 aa20.55■□□□□ 0.88
AC099668.1-201ENST00000563780 CECR2Q9BXF3 1484 aa20.43■□□□□ 0.86
AC099668.1-201ENST00000563780 SCRIBQ14160 1630 aa20.38■□□□□ 0.85
AC099668.1-201ENST00000563780 CC2D2AQ9P2K1 1620 aa20.38■□□□□ 0.85
AC099668.1-201ENST00000563780 EIF4G1Q04637 1599 aaKnown RBP20.32■□□□□ 0.84
AC099668.1-201ENST00000563780 DNAJC5Q9H3Z4 198 aa19.87■□□□□ 0.77
AC099668.1-201ENST00000563780 NCAPD3P42695 1498 aa19.72■□□□□ 0.75
AC099668.1-201ENST00000563780 ATAD2BQ9ULI0 1458 aa19.6■□□□□ 0.73
AC099668.1-201ENST00000563780 CUX2O14529 1486 aa19.59■□□□□ 0.73
AC099668.1-201ENST00000563780 ERCC6Q03468 1493 aa19.56■□□□□ 0.72
AC099668.1-201ENST00000563780 SMARCA2P51531 1590 aa19.49■□□□□ 0.71
AC099668.1-201ENST00000563780 HMGXB3Q12766 1538 aa19.46■□□□□ 0.71
AC099668.1-201ENST00000563780 SMARCA4P51532 1647 aa19.43■□□□□ 0.7
AC099668.1-201ENST00000563780 BAZ1AQ9NRL2 1556 aaPredicted RBP19.4■□□□□ 0.7
AC099668.1-201ENST00000563780 NESP48681 1621 aa19.39■□□□□ 0.69
AC099668.1-201ENST00000563780 BAZ1BQ9UIG0 1483 aaKnown RBP19.37■□□□□ 0.69
AC099668.1-201ENST00000563780 RSF1Q96T23 1441 aaPredicted RBP19.35■□□□□ 0.69
AC099668.1-201ENST00000563780 MROH2BQ7Z745 1585 aa19.34■□□□□ 0.69
AC099668.1-201ENST00000563780 PEG3Q9GZU2 1588 aa19.28■□□□□ 0.68
AC099668.1-201ENST00000563780 SUPT5HO00267 1087 aaKnown RBP19.22■□□□□ 0.67
AC099668.1-201ENST00000563780 LAMC3Q9Y6N6 1575 aa19.19■□□□□ 0.66
AC099668.1-201ENST00000563780 PDS5BQ9NTI5 1447 aa19.19■□□□□ 0.66
AC099668.1-201ENST00000563780 THOC2Q8NI27 1593 aaKnown RBP19.14■□□□□ 0.65
AC099668.1-201ENST00000563780 CADPSQ9ULU8 1353 aa19.13■□□□□ 0.65
AC099668.1-201ENST00000563780 WIZO95785 1651 aa19.12■□□□□ 0.65
AC099668.1-201ENST00000563780 MRC2Q9UBG0 1479 aa18.98■□□□□ 0.63
AC099668.1-201ENST00000563780 KIF21AQ7Z4S6 1674 aa18.98■□□□□ 0.63
AC099668.1-201ENST00000563780 TOP2AP11388 1531 aaKnown RBP18.96■□□□□ 0.63
AC099668.1-201ENST00000563780 WDR62O43379 1518 aa18.9■□□□□ 0.62
AC099668.1-201ENST00000563780 TRIM41Q8WV44 630 aa18.9■□□□□ 0.62
AC099668.1-201ENST00000563780 CEP164Q9UPV0 1460 aa18.86■□□□□ 0.61
AC099668.1-201ENST00000563780 FANCD2Q9BXW9 1451 aa18.85■□□□□ 0.61
AC099668.1-201ENST00000563780 CFTRP13569 1480 aa18.84■□□□□ 0.61
AC099668.1-201ENST00000563780 CCDC88BA6NC98 1476 aa18.78■□□□□ 0.6
AC099668.1-201ENST00000563780 OSCARQ8IYS5 282 aa18.78■□□□□ 0.6
AC099668.1-201ENST00000563780 URB2Q14146 1524 aaKnown RBP18.69■□□□□ 0.58
AC099668.1-201ENST00000563780 IFT140Q96RY7 1462 aa18.52■□□□□ 0.55
AC099668.1-201ENST00000563780 ZNF608Q9ULD9 1512 aaPredicted RBP18.49■□□□□ 0.55
AC099668.1-201ENST00000563780 TOPBP1Q92547 1522 aa18.45■□□□□ 0.54
AC099668.1-201ENST00000563780 ABCC8Q09428 1581 aa18.44■□□□□ 0.54
AC099668.1-201ENST00000563780 CHIC1Q5VXU3 224 aa18.35■□□□□ 0.53
AC099668.1-201ENST00000563780 PRDM2Q13029 1718 aa18.35■□□□□ 0.53
AC099668.1-201ENST00000563780 RIMBP3CA6NJZ7 1639 aa18.34■□□□□ 0.53
AC099668.1-201ENST00000563780 RIMBP3BA6NNM3 1639 aa18.34■□□□□ 0.53
AC099668.1-201ENST00000563780 RIMBP3Q9UFD9 1639 aa18.34■□□□□ 0.53
AC099668.1-201ENST00000563780 ARHGEF11O15085 1522 aa18.34■□□□□ 0.53
AC099668.1-201ENST00000563780 AQRO60306 1485 aaKnown RBP eCLIP18.34■□□□□ 0.53
AC099668.1-201ENST00000563780 CYB5RLQ6IPT4 315 aa18.34■□□□□ 0.53
AC099668.1-201ENST00000563780 DNMBPQ6XZF7 1577 aa18.33■□□□□ 0.52
AC099668.1-201ENST00000563780 FBLN2P98095 1184 aa18.3■□□□□ 0.52
AC099668.1-201ENST00000563780 EIF4G3O43432 1585 aaKnown RBP18.28■□□□□ 0.52
AC099668.1-201ENST00000563780 POLA1P09884 1462 aaPredicted RBP18.26■□□□□ 0.51
AC099668.1-201ENST00000563780 SOGA1O94964 1423 aa18.24■□□□□ 0.51
AC099668.1-201ENST00000563780 TARBP1Q13395 1621 aaKnown RBP18.24■□□□□ 0.51
AC099668.1-201ENST00000563780 TDRD9Q8NDG6 1382 aaKnown RBP18.23■□□□□ 0.51
AC099668.1-201ENST00000563780 RAD54L2Q9Y4B4 1467 aa18.22■□□□□ 0.51
AC099668.1-201ENST00000563780 WRNQ14191 1432 aaPredicted RBP eCLIP18.2■□□□□ 0.5
AC099668.1-201ENST00000563780 TRHP20396 242 aaPredicted RBP18.18■□□□□ 0.5
AC099668.1-201ENST00000563780 CHMP7Q8WUX9 453 aaPredicted RBP18.16■□□□□ 0.5
AC099668.1-201ENST00000563780 ARAP1Q96P48 1450 aa18.15■□□□□ 0.5
AC099668.1-201ENST00000563780 FGD5Q6ZNL6 1462 aa18.12■□□□□ 0.49
AC099668.1-201ENST00000563780 SNAPC4Q5SXM2 1469 aa18.1■□□□□ 0.49
AC099668.1-201ENST00000563780 CHD1O14646 1710 aa18.09■□□□□ 0.49
AC099668.1-201ENST00000563780 TOP2BQ02880 1626 aa18.09■□□□□ 0.49
AC099668.1-201ENST00000563780 CUX1P39880 1505 aa18.09■□□□□ 0.49
AC099668.1-201ENST00000563780 BIVM-ERCC5R4GMW8 1640 aa18.08■□□□□ 0.48
AC099668.1-201ENST00000563780 SYNJ1O43426 1573 aa18.07■□□□□ 0.48
AC099668.1-201ENST00000563780 GRIN2BQ13224 1484 aa18.07■□□□□ 0.48
AC099668.1-201ENST00000563780 MAGI1Q96QZ7 1491 aaPredicted RBP18.06■□□□□ 0.48
AC099668.1-201ENST00000563780 WDR97A6NE52 1622 aa18.05■□□□□ 0.48
AC099668.1-201ENST00000563780 SYNJ2O15056 1496 aa18.01■□□□□ 0.47
AC099668.1-201ENST00000563780 CLASP1Q7Z460 1538 aa18.01■□□□□ 0.47
AC099668.1-201ENST00000563780 GAPVD1Q14C86 1478 aa17.98■□□□□ 0.47
AC099668.1-201ENST00000563780 ABCA10Q8WWZ4 1543 aa17.91■□□□□ 0.46
AC099668.1-201ENST00000563780 EEA1Q15075 1411 aa17.85■□□□□ 0.45
AC099668.1-201ENST00000563780 ABCA5Q8WWZ7 1642 aa17.81■□□□□ 0.44
AC099668.1-201ENST00000563780 GRIN2AQ12879 1464 aa17.81■□□□□ 0.44
AC099668.1-201ENST00000563780 KIF27Q86VH2 1401 aa17.79■□□□□ 0.44
AC099668.1-201ENST00000563780 RUSC2Q8N2Y8 1516 aa17.78■□□□□ 0.44
AC099668.1-201ENST00000563780 PBRM1Q86U86 1689 aa17.78■□□□□ 0.44
AC099668.1-201ENST00000563780 CSRNP3Q8WYN3 585 aa17.78■□□□□ 0.44
AC099668.1-201ENST00000563780 NUP160Q12769 1436 aa17.78■□□□□ 0.44
AC099668.1-201ENST00000563780 AEBP2Q6ZN18 517 aaPredicted RBP17.77■□□□□ 0.44
AC099668.1-201ENST00000563780 FHAD1B1AJZ9 1412 aa17.76■□□□□ 0.43
AC099668.1-201ENST00000563780 ERCC6L2Q5T890 1561 aa17.72■□□□□ 0.43
AC099668.1-201ENST00000563780 IGF1RP08069 1367 aa17.72■□□□□ 0.43
AC099668.1-201ENST00000563780 FAM9AQ8IZU1 332 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms