RNA–Protein interactions for RNA: ENST00000563748.5

LPCAT4-205, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 1,357 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-205ENST00000563748 NISCHQ9Y2I1 1504 aa39.38■■■■□ 3.9
LPCAT4-205ENST00000563748 CCDC180Q9P1Z9 1646 aa35.31■■■■□ 3.24
LPCAT4-205ENST00000563748 ABCC9O60706 1549 aa34.96■■■■□ 3.19
LPCAT4-205ENST00000563748 RB1CC1Q8TDY2 1594 aa33.45■■■□□ 2.95
LPCAT4-205ENST00000563748 NACADO15069 1562 aa33.28■■■□□ 2.92
LPCAT4-205ENST00000563748 DCAF8L2P0C7V8 631 aa32.98■■■□□ 2.87
LPCAT4-205ENST00000563748 MYO15BQ96JP2 1530 aa32.93■■■□□ 2.86
LPCAT4-205ENST00000563748 UNC13AQ9UPW8 1703 aa32.75■■■□□ 2.83
LPCAT4-205ENST00000563748 ZCCHC6Q5VYS8 1495 aaKnown RBP32.7■■■□□ 2.83
LPCAT4-205ENST00000563748 DCAF1Q9Y4B6 1507 aa32.58■■■□□ 2.81
LPCAT4-205ENST00000563748 DNAJC5BQ9UF47 199 aa32.57■■■□□ 2.8
LPCAT4-205ENST00000563748 PABPN1Q86U42 306 aaKnown RBP eCLIP32.54■■■□□ 2.81e-6■■□□□ 13.4
LPCAT4-205ENST00000563748 BICRAQ9NZM4 1560 aa32.49■■■□□ 2.79
LPCAT4-205ENST00000563748 SCRIBQ14160 1630 aa32.11■■■□□ 2.73
LPCAT4-205ENST00000563748 SHROOM4Q9ULL8 1493 aa32.09■■■□□ 2.73
LPCAT4-205ENST00000563748 CC2D2AQ9P2K1 1620 aa31.65■■■□□ 2.66
LPCAT4-205ENST00000563748 EIF4G1Q04637 1599 aaKnown RBP31.64■■■□□ 2.66
LPCAT4-205ENST00000563748 CECR2Q9BXF3 1484 aa31.48■■■□□ 2.63
LPCAT4-205ENST00000563748 NCAPD3P42695 1498 aa30.69■■■□□ 2.5
LPCAT4-205ENST00000563748 SMARCA4P51532 1647 aa30.69■■■□□ 2.5
LPCAT4-205ENST00000563748 ATAD2BQ9ULI0 1458 aa30.63■■■□□ 2.49
LPCAT4-205ENST00000563748 SMARCA2P51531 1590 aa30.58■■■□□ 2.49
LPCAT4-205ENST00000563748 BAZ1AQ9NRL2 1556 aaPredicted RBP30.56■■■□□ 2.48
LPCAT4-205ENST00000563748 HMGXB3Q12766 1538 aa30.53■■■□□ 2.48
LPCAT4-205ENST00000563748 PEG3Q9GZU2 1588 aa30.42■■■□□ 2.46
LPCAT4-205ENST00000563748 MROH2BQ7Z745 1585 aa30.34■■■□□ 2.45
LPCAT4-205ENST00000563748 BAZ1BQ9UIG0 1483 aaKnown RBP30.34■■■□□ 2.45
LPCAT4-205ENST00000563748 ERCC6Q03468 1493 aa30.17■■■□□ 2.42
LPCAT4-205ENST00000563748 NESP48681 1621 aa30.12■■■□□ 2.41
LPCAT4-205ENST00000563748 CUX2O14529 1486 aa30.08■■■□□ 2.41
LPCAT4-205ENST00000563748 WIZO95785 1651 aa30■■■□□ 2.39
LPCAT4-205ENST00000563748 LAMC3Q9Y6N6 1575 aa30■■■□□ 2.39
LPCAT4-205ENST00000563748 THOC2Q8NI27 1593 aaKnown RBP29.83■■■□□ 2.37
LPCAT4-205ENST00000563748 KIF21AQ7Z4S6 1674 aa29.81■■■□□ 2.36
LPCAT4-205ENST00000563748 RSF1Q96T23 1441 aaPredicted RBP29.79■■■□□ 2.36
LPCAT4-205ENST00000563748 PDS5BQ9NTI5 1447 aa29.76■■■□□ 2.35
LPCAT4-205ENST00000563748 DNAJC5Q9H3Z4 198 aa29.75■■■□□ 2.35
LPCAT4-205ENST00000563748 CADPSQ9ULU8 1353 aa29.74■■■□□ 2.35
LPCAT4-205ENST00000563748 TOP2AP11388 1531 aaKnown RBP29.65■■■□□ 2.34
LPCAT4-205ENST00000563748 MRC2Q9UBG0 1479 aa29.52■■■□□ 2.32
LPCAT4-205ENST00000563748 CFTRP13569 1480 aa29.49■■■□□ 2.31
LPCAT4-205ENST00000563748 WDR62O43379 1518 aa29.46■■■□□ 2.31
LPCAT4-205ENST00000563748 CEP164Q9UPV0 1460 aa29.44■■■□□ 2.3
LPCAT4-205ENST00000563748 FANCD2Q9BXW9 1451 aa29.42■■■□□ 2.3
LPCAT4-205ENST00000563748 PRDM2Q13029 1718 aa29.31■■■□□ 2.28
LPCAT4-205ENST00000563748 CCDC88BA6NC98 1476 aa29.27■■■□□ 2.28
LPCAT4-205ENST00000563748 URB2Q14146 1524 aaKnown RBP29.19■■■□□ 2.26
LPCAT4-205ENST00000563748 TOPBP1Q92547 1522 aa28.91■■■□□ 2.22
LPCAT4-205ENST00000563748 ABCC8Q09428 1581 aa28.86■■■□□ 2.21
LPCAT4-205ENST00000563748 DNMBPQ6XZF7 1577 aa28.85■■■□□ 2.21
LPCAT4-205ENST00000563748 IFT140Q96RY7 1462 aa28.85■■■□□ 2.21
LPCAT4-205ENST00000563748 ZNF608Q9ULD9 1512 aaPredicted RBP28.76■■■□□ 2.19
LPCAT4-205ENST00000563748 OSCARQ8IYS5 282 aa28.68■■■□□ 2.18
LPCAT4-205ENST00000563748 TARBP1Q13395 1621 aaKnown RBP28.67■■■□□ 2.18
LPCAT4-205ENST00000563748 EIF4G3O43432 1585 aaKnown RBP28.66■■■□□ 2.18
LPCAT4-205ENST00000563748 POLA1P09884 1462 aaPredicted RBP28.62■■■□□ 2.17
LPCAT4-205ENST00000563748 SUPT5HO00267 1087 aaKnown RBP28.53■■■□□ 2.16
LPCAT4-205ENST00000563748 AQRO60306 1485 aaKnown RBP eCLIP28.51■■■□□ 2.151e-6■■■■■ 42.4
LPCAT4-205ENST00000563748 CUX1P39880 1505 aa28.51■■■□□ 2.15
LPCAT4-205ENST00000563748 TRIM41Q8WV44 630 aa28.49■■■□□ 2.15
LPCAT4-205ENST00000563748 RAD54L2Q9Y4B4 1467 aa28.48■■■□□ 2.15
LPCAT4-205ENST00000563748 FGD5Q6ZNL6 1462 aa28.47■■■□□ 2.15
LPCAT4-205ENST00000563748 SOGA1O94964 1423 aa28.46■■■□□ 2.15
LPCAT4-205ENST00000563748 CHD1O14646 1710 aa28.42■■■□□ 2.14
LPCAT4-205ENST00000563748 WDR97A6NE52 1622 aa28.41■■■□□ 2.14
LPCAT4-205ENST00000563748 RIMBP3CA6NJZ7 1639 aa28.36■■■□□ 2.13
LPCAT4-205ENST00000563748 RIMBP3BA6NNM3 1639 aa28.36■■■□□ 2.13
LPCAT4-205ENST00000563748 RIMBP3Q9UFD9 1639 aa28.36■■■□□ 2.13
LPCAT4-205ENST00000563748 TDRD9Q8NDG6 1382 aaKnown RBP28.36■■■□□ 2.13
LPCAT4-205ENST00000563748 ARHGEF11O15085 1522 aa28.28■■■□□ 2.12
LPCAT4-205ENST00000563748 SNAPC4Q5SXM2 1469 aa28.25■■■□□ 2.11
LPCAT4-205ENST00000563748 FBLN2P98095 1184 aa28.22■■■□□ 2.11
LPCAT4-205ENST00000563748 GRIN2BQ13224 1484 aa28.21■■■□□ 2.11
LPCAT4-205ENST00000563748 MAGI1Q96QZ7 1491 aaPredicted RBP28.21■■■□□ 2.11
LPCAT4-205ENST00000563748 PBRM1Q86U86 1689 aa28.18■■■□□ 2.1
LPCAT4-205ENST00000563748 ABCA10Q8WWZ4 1543 aa28.17■■■□□ 2.1
LPCAT4-205ENST00000563748 ABCA5Q8WWZ7 1642 aa28.15■■■□□ 2.1
LPCAT4-205ENST00000563748 BIVM-ERCC5R4GMW8 1640 aa28.15■■■□□ 2.1
LPCAT4-205ENST00000563748 GAPVD1Q14C86 1478 aa28.14■■■□□ 2.1
LPCAT4-205ENST00000563748 TOP2BQ02880 1626 aa28.12■■■□□ 2.09
LPCAT4-205ENST00000563748 SYNJ2O15056 1496 aa28.1■■■□□ 2.09
LPCAT4-205ENST00000563748 CLASP1Q7Z460 1538 aa28.1■■■□□ 2.09
LPCAT4-205ENST00000563748 SYNJ1O43426 1573 aa28.08■■■□□ 2.09
LPCAT4-205ENST00000563748 WRNQ14191 1432 aaPredicted RBP eCLIP28.08■■■□□ 2.09
LPCAT4-205ENST00000563748 CHMP7Q8WUX9 453 aaPredicted RBP28.07■■■□□ 2.08
LPCAT4-205ENST00000563748 ARAP1Q96P48 1450 aa28.01■■■□□ 2.08
LPCAT4-205ENST00000563748 CYB5RLQ6IPT4 315 aa27.97■■■□□ 2.07
LPCAT4-205ENST00000563748 ADAMTS12P58397 1594 aa27.91■■■□□ 2.06
LPCAT4-205ENST00000563748 GRIN2AQ12879 1464 aa27.86■■■□□ 2.05
LPCAT4-205ENST00000563748 ERICH3Q5RHP9 1530 aa27.84■■■□□ 2.05
LPCAT4-205ENST00000563748 FHAD1B1AJZ9 1412 aa27.79■■■□□ 2.04
LPCAT4-205ENST00000563748 NUP160Q12769 1436 aa27.77■■■□□ 2.04
LPCAT4-205ENST00000563748 CEP170Q5SW79 1584 aa27.77■■■□□ 2.04
LPCAT4-205ENST00000563748 SHROOM2Q13796 1616 aa27.66■■■□□ 2.02
LPCAT4-205ENST00000563748 ERCC6L2Q5T890 1561 aa27.64■■■□□ 2.02
LPCAT4-205ENST00000563748 TRHP20396 242 aaPredicted RBP27.56■■■□□ 2
LPCAT4-205ENST00000563748 KIF27Q86VH2 1401 aa27.53■■■□□ 2
LPCAT4-205ENST00000563748 RUSC2Q8N2Y8 1516 aa27.52■■■□□ 2
LPCAT4-205ENST00000563748 CUL7Q14999 1698 aa27.5■■□□□ 1.99
LPCAT4-205ENST00000563748 IGF1RP08069 1367 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms