RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 NISCHQ9Y2I1 1504 aa43.17■■■■■ 4.5
MAP1LC3B-204ENST00000563720 ABCC9O60706 1549 aa39.18■■■■□ 3.86
MAP1LC3B-204ENST00000563720 CCDC180Q9P1Z9 1646 aa38.64■■■■□ 3.78
MAP1LC3B-204ENST00000563720 DNAJC5BQ9UF47 199 aa37.14■■■■□ 3.54
MAP1LC3B-204ENST00000563720 RB1CC1Q8TDY2 1594 aa37.06■■■■□ 3.52
MAP1LC3B-204ENST00000563720 NACADO15069 1562 aa36.68■■■■□ 3.46
MAP1LC3B-204ENST00000563720 DCAF8L2P0C7V8 631 aa36.55■■■■□ 3.44
MAP1LC3B-204ENST00000563720 PABPN1Q86U42 306 aaKnown RBP eCLIP36.44■■■■□ 3.42
MAP1LC3B-204ENST00000563720 UNC13AQ9UPW8 1703 aa36.14■■■■□ 3.38
MAP1LC3B-204ENST00000563720 MYO15BQ96JP2 1530 aa36.01■■■■□ 3.36
MAP1LC3B-204ENST00000563720 BICRAQ9NZM4 1560 aa35.95■■■■□ 3.35
MAP1LC3B-204ENST00000563720 ZCCHC6Q5VYS8 1495 aaKnown RBP35.87■■■■□ 3.33
MAP1LC3B-204ENST00000563720 DCAF1Q9Y4B6 1507 aa35.7■■■■□ 3.31
MAP1LC3B-204ENST00000563720 SHROOM4Q9ULL8 1493 aa35.44■■■■□ 3.26
MAP1LC3B-204ENST00000563720 CECR2Q9BXF3 1484 aa35.34■■■■□ 3.25
MAP1LC3B-204ENST00000563720 CC2D2AQ9P2K1 1620 aa35.32■■■■□ 3.25
MAP1LC3B-204ENST00000563720 SCRIBQ14160 1630 aa35.24■■■■□ 3.23
MAP1LC3B-204ENST00000563720 EIF4G1Q04637 1599 aaKnown RBP35.13■■■■□ 3.21
MAP1LC3B-204ENST00000563720 DNAJC5Q9H3Z4 198 aa34.45■■■■□ 3.11
MAP1LC3B-204ENST00000563720 CUX2O14529 1486 aa33.93■■■■□ 3.02
MAP1LC3B-204ENST00000563720 NCAPD3P42695 1498 aa33.88■■■■□ 3.01
MAP1LC3B-204ENST00000563720 ERCC6Q03468 1493 aa33.88■■■■□ 3.01
MAP1LC3B-204ENST00000563720 ATAD2BQ9ULI0 1458 aa33.72■■■□□ 2.99
MAP1LC3B-204ENST00000563720 SMARCA4P51532 1647 aa33.63■■■□□ 2.97
MAP1LC3B-204ENST00000563720 SMARCA2P51531 1590 aa33.6■■■□□ 2.97
MAP1LC3B-204ENST00000563720 HMGXB3Q12766 1538 aa33.57■■■□□ 2.96
MAP1LC3B-204ENST00000563720 NESP48681 1621 aa33.5■■■□□ 2.95
MAP1LC3B-204ENST00000563720 BAZ1AQ9NRL2 1556 aaPredicted RBP33.48■■■□□ 2.95
MAP1LC3B-204ENST00000563720 BAZ1BQ9UIG0 1483 aaKnown RBP33.39■■■□□ 2.94
MAP1LC3B-204ENST00000563720 PEG3Q9GZU2 1588 aa33.3■■■□□ 2.92
MAP1LC3B-204ENST00000563720 MROH2BQ7Z745 1585 aa33.27■■■□□ 2.92
MAP1LC3B-204ENST00000563720 THOC2Q8NI27 1593 aaKnown RBP33.21■■■□□ 2.91
MAP1LC3B-204ENST00000563720 LAMC3Q9Y6N6 1575 aa33.18■■■□□ 2.9
MAP1LC3B-204ENST00000563720 PDS5BQ9NTI5 1447 aa33.06■■■□□ 2.88
MAP1LC3B-204ENST00000563720 KIF21AQ7Z4S6 1674 aa33.01■■■□□ 2.88
MAP1LC3B-204ENST00000563720 WIZO95785 1651 aa32.94■■■□□ 2.86
MAP1LC3B-204ENST00000563720 CADPSQ9ULU8 1353 aa32.86■■■□□ 2.85
MAP1LC3B-204ENST00000563720 TRIM41Q8WV44 630 aa32.83■■■□□ 2.85
MAP1LC3B-204ENST00000563720 MRC2Q9UBG0 1479 aa32.77■■■□□ 2.84
MAP1LC3B-204ENST00000563720 RSF1Q96T23 1441 aaPredicted RBP32.7■■■□□ 2.83
MAP1LC3B-204ENST00000563720 WDR62O43379 1518 aa32.67■■■□□ 2.82
MAP1LC3B-204ENST00000563720 CEP164Q9UPV0 1460 aa32.56■■■□□ 2.8
MAP1LC3B-204ENST00000563720 TOP2AP11388 1531 aaKnown RBP32.51■■■□□ 2.8
MAP1LC3B-204ENST00000563720 FANCD2Q9BXW9 1451 aa32.48■■■□□ 2.79
MAP1LC3B-204ENST00000563720 OSCARQ8IYS5 282 aa32.37■■■□□ 2.77
MAP1LC3B-204ENST00000563720 CFTRP13569 1480 aa32.36■■■□□ 2.77
MAP1LC3B-204ENST00000563720 URB2Q14146 1524 aaKnown RBP32.22■■■□□ 2.75
MAP1LC3B-204ENST00000563720 PRDM2Q13029 1718 aa32.14■■■□□ 2.74
MAP1LC3B-204ENST00000563720 CCDC88BA6NC98 1476 aa32.12■■■□□ 2.73
MAP1LC3B-204ENST00000563720 IFT140Q96RY7 1462 aa31.93■■■□□ 2.7
MAP1LC3B-204ENST00000563720 RIMBP3CA6NJZ7 1639 aa31.92■■■□□ 2.7
MAP1LC3B-204ENST00000563720 RIMBP3BA6NNM3 1639 aa31.92■■■□□ 2.7
MAP1LC3B-204ENST00000563720 RIMBP3Q9UFD9 1639 aa31.92■■■□□ 2.7
MAP1LC3B-204ENST00000563720 ZNF608Q9ULD9 1512 aaPredicted RBP31.9■■■□□ 2.7
MAP1LC3B-204ENST00000563720 TOPBP1Q92547 1522 aa31.8■■■□□ 2.68
MAP1LC3B-204ENST00000563720 ARHGEF11O15085 1522 aa31.79■■■□□ 2.68
MAP1LC3B-204ENST00000563720 ABCC8Q09428 1581 aa31.72■■■□□ 2.67
MAP1LC3B-204ENST00000563720 EIF4G3O43432 1585 aaKnown RBP31.68■■■□□ 2.66
MAP1LC3B-204ENST00000563720 CYB5RLQ6IPT4 315 aa31.66■■■□□ 2.66
MAP1LC3B-204ENST00000563720 DNMBPQ6XZF7 1577 aa31.64■■■□□ 2.65
MAP1LC3B-204ENST00000563720 AQRO60306 1485 aaKnown RBP eCLIP31.59■■■□□ 2.65
MAP1LC3B-204ENST00000563720 FBLN2P98095 1184 aa31.55■■■□□ 2.64
MAP1LC3B-204ENST00000563720 CHD1O14646 1710 aa31.52■■■□□ 2.64
MAP1LC3B-204ENST00000563720 TARBP1Q13395 1621 aaKnown RBP31.51■■■□□ 2.63
MAP1LC3B-204ENST00000563720 TRHP20396 242 aaPredicted RBP31.49■■■□□ 2.63
MAP1LC3B-204ENST00000563720 SUPT5HO00267 1087 aaKnown RBP31.48■■■□□ 2.63
MAP1LC3B-204ENST00000563720 POLA1P09884 1462 aaPredicted RBP31.45■■■□□ 2.62
MAP1LC3B-204ENST00000563720 ARAP1Q96P48 1450 aa31.45■■■□□ 2.62
MAP1LC3B-204ENST00000563720 RAD54L2Q9Y4B4 1467 aa31.36■■■□□ 2.61
MAP1LC3B-204ENST00000563720 SOGA1O94964 1423 aa31.34■■■□□ 2.61
MAP1LC3B-204ENST00000563720 TDRD9Q8NDG6 1382 aaKnown RBP31.34■■■□□ 2.61
MAP1LC3B-204ENST00000563720 SNAPC4Q5SXM2 1469 aa31.25■■■□□ 2.59
MAP1LC3B-204ENST00000563720 CUX1P39880 1505 aa31.24■■■□□ 2.59
MAP1LC3B-204ENST00000563720 CHMP7Q8WUX9 453 aaPredicted RBP31.23■■■□□ 2.59
MAP1LC3B-204ENST00000563720 FGD5Q6ZNL6 1462 aa31.2■■■□□ 2.58
MAP1LC3B-204ENST00000563720 WDR97A6NE52 1622 aa31.16■■■□□ 2.58
MAP1LC3B-204ENST00000563720 CLASP1Q7Z460 1538 aa31.16■■■□□ 2.58
MAP1LC3B-204ENST00000563720 SYNJ1O43426 1573 aa31.14■■■□□ 2.58
MAP1LC3B-204ENST00000563720 MAGI1Q96QZ7 1491 aaPredicted RBP31.14■■■□□ 2.57
MAP1LC3B-204ENST00000563720 GRIN2BQ13224 1484 aa31.1■■■□□ 2.57
MAP1LC3B-204ENST00000563720 SYNJ2O15056 1496 aa31.04■■■□□ 2.56
MAP1LC3B-204ENST00000563720 GAPVD1Q14C86 1478 aa30.93■■■□□ 2.54
MAP1LC3B-204ENST00000563720 AEBP2Q6ZN18 517 aaPredicted RBP30.92■■■□□ 2.54
MAP1LC3B-204ENST00000563720 BIVM-ERCC5R4GMW8 1640 aa30.91■■■□□ 2.54
MAP1LC3B-204ENST00000563720 PBRM1Q86U86 1689 aa30.88■■■□□ 2.53
MAP1LC3B-204ENST00000563720 TOP2BQ02880 1626 aa30.87■■■□□ 2.53
MAP1LC3B-204ENST00000563720 ABCA10Q8WWZ4 1543 aa30.86■■■□□ 2.53
MAP1LC3B-204ENST00000563720 WRNQ14191 1432 aaPredicted RBP eCLIP30.83■■■□□ 2.53
MAP1LC3B-204ENST00000563720 ABCA5Q8WWZ7 1642 aa30.83■■■□□ 2.53
MAP1LC3B-204ENST00000563720 GRIN2AQ12879 1464 aa30.69■■■□□ 2.5
MAP1LC3B-204ENST00000563720 ERCC6L2Q5T890 1561 aa30.66■■■□□ 2.5
MAP1LC3B-204ENST00000563720 NUP160Q12769 1436 aa30.59■■■□□ 2.49
MAP1LC3B-204ENST00000563720 ADAMTS12P58397 1594 aa30.58■■■□□ 2.49
MAP1LC3B-204ENST00000563720 CEP170Q5SW79 1584 aa30.58■■■□□ 2.49
MAP1LC3B-204ENST00000563720 FHAD1B1AJZ9 1412 aa30.53■■■□□ 2.48
MAP1LC3B-204ENST00000563720 ERICH3Q5RHP9 1530 aa30.48■■■□□ 2.47
MAP1LC3B-204ENST00000563720 SHROOM2Q13796 1616 aa30.47■■■□□ 2.47
MAP1LC3B-204ENST00000563720 PRG4Q92954 1404 aaPredicted RBP30.38■■■□□ 2.45
MAP1LC3B-204ENST00000563720 JPH4Q96JJ6 628 aa30.34■■■□□ 2.45
MAP1LC3B-204ENST00000563720 KIF13AQ9H1H9 1805 aa30.29■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms