RNA–Protein interactions for RNA: ENST00000563710.6

C13orf42-202, Transcript of chromosome 13 open reading frame 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene C13orf42, Length 3,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C13orf42-202ENST00000563710 NISCHQ9Y2I1 1504 aa25.66■■□□□ 1.7
C13orf42-202ENST00000563710 CCDC180Q9P1Z9 1646 aa22.69■■□□□ 1.22
C13orf42-202ENST00000563710 ZCCHC6Q5VYS8 1495 aaKnown RBP21.56■■□□□ 1.04
C13orf42-202ENST00000563710 DCAF1Q9Y4B6 1507 aa21.4■■□□□ 1.02
C13orf42-202ENST00000563710 MYO15BQ96JP2 1530 aa21.26■□□□□ 0.99
C13orf42-202ENST00000563710 ABCC9O60706 1549 aa21.2■□□□□ 0.98
C13orf42-202ENST00000563710 NACADO15069 1562 aa21.07■□□□□ 0.96
C13orf42-202ENST00000563710 RB1CC1Q8TDY2 1594 aa20.9■□□□□ 0.94
C13orf42-202ENST00000563710 DCAF8L2P0C7V8 631 aa20.76■□□□□ 0.91
C13orf42-202ENST00000563710 SCRIBQ14160 1630 aa20.54■□□□□ 0.88
C13orf42-202ENST00000563710 UNC13AQ9UPW8 1703 aa20.51■□□□□ 0.87
C13orf42-202ENST00000563710 SHROOM4Q9ULL8 1493 aa20.4■□□□□ 0.86
C13orf42-202ENST00000563710 BICRAQ9NZM4 1560 aa20.24■□□□□ 0.83
C13orf42-202ENST00000563710 BAZ1AQ9NRL2 1556 aaPredicted RBP19.87■□□□□ 0.77
C13orf42-202ENST00000563710 PABPN1Q86U42 306 aaKnown RBP eCLIP19.81■□□□□ 0.76
C13orf42-202ENST00000563710 CECR2Q9BXF3 1484 aa19.81■□□□□ 0.76
C13orf42-202ENST00000563710 SMARCA4P51532 1647 aa19.81■□□□□ 0.76
C13orf42-202ENST00000563710 RSF1Q96T23 1441 aaPredicted RBP19.75■□□□□ 0.75
C13orf42-202ENST00000563710 MROH2BQ7Z745 1585 aa19.74■□□□□ 0.75
C13orf42-202ENST00000563710 PEG3Q9GZU2 1588 aa19.68■□□□□ 0.74
C13orf42-202ENST00000563710 EIF4G1Q04637 1599 aaKnown RBP19.61■□□□□ 0.73
C13orf42-202ENST00000563710 WIZO95785 1651 aa19.59■□□□□ 0.73
C13orf42-202ENST00000563710 SMARCA2P51531 1590 aa19.53■□□□□ 0.72
C13orf42-202ENST00000563710 SUPT5HO00267 1087 aaKnown RBP19.5■□□□□ 0.71
C13orf42-202ENST00000563710 TOP2AP11388 1531 aaKnown RBP19.48■□□□□ 0.71
C13orf42-202ENST00000563710 ATAD2BQ9ULI0 1458 aa19.45■□□□□ 0.7
C13orf42-202ENST00000563710 HMGXB3Q12766 1538 aa19.42■□□□□ 0.7
C13orf42-202ENST00000563710 NCAPD3P42695 1498 aa19.37■□□□□ 0.69
C13orf42-202ENST00000563710 CC2D2AQ9P2K1 1620 aa19.35■□□□□ 0.69
C13orf42-202ENST00000563710 BAZ1BQ9UIG0 1483 aaKnown RBP19.31■□□□□ 0.68
C13orf42-202ENST00000563710 CCDC88BA6NC98 1476 aa19.15■□□□□ 0.66
C13orf42-202ENST00000563710 PRDM2Q13029 1718 aa18.99■□□□□ 0.63
C13orf42-202ENST00000563710 CFTRP13569 1480 aa18.87■□□□□ 0.61
C13orf42-202ENST00000563710 LAMC3Q9Y6N6 1575 aa18.8■□□□□ 0.6
C13orf42-202ENST00000563710 CADPSQ9ULU8 1353 aa18.77■□□□□ 0.6
C13orf42-202ENST00000563710 DNAJC5BQ9UF47 199 aa18.76■□□□□ 0.59
C13orf42-202ENST00000563710 CHIC1Q5VXU3 224 aa18.73■□□□□ 0.59
C13orf42-202ENST00000563710 BIVM-ERCC5R4GMW8 1640 aa18.64■□□□□ 0.57
C13orf42-202ENST00000563710 ABCC8Q09428 1581 aa18.63■□□□□ 0.57
C13orf42-202ENST00000563710 TOP2BQ02880 1626 aa18.59■□□□□ 0.57
C13orf42-202ENST00000563710 WRNQ14191 1432 aaPredicted RBP eCLIP18.58■□□□□ 0.57
C13orf42-202ENST00000563710 NESP48681 1621 aa18.58■□□□□ 0.56
C13orf42-202ENST00000563710 SYNJ1O43426 1573 aa18.57■□□□□ 0.56
C13orf42-202ENST00000563710 FANCD2Q9BXW9 1451 aa18.57■□□□□ 0.56
C13orf42-202ENST00000563710 PDS5BQ9NTI5 1447 aa18.54■□□□□ 0.56
C13orf42-202ENST00000563710 KIF21AQ7Z4S6 1674 aa18.53■□□□□ 0.56
C13orf42-202ENST00000563710 CUX1P39880 1505 aa18.5■□□□□ 0.55
C13orf42-202ENST00000563710 CEP164Q9UPV0 1460 aa18.5■□□□□ 0.55
C13orf42-202ENST00000563710 DNMBPQ6XZF7 1577 aa18.48■□□□□ 0.55
C13orf42-202ENST00000563710 TRIM41Q8WV44 630 aa18.47■□□□□ 0.55
C13orf42-202ENST00000563710 TOPBP1Q92547 1522 aa18.38■□□□□ 0.53
C13orf42-202ENST00000563710 URB2Q14146 1524 aaKnown RBP18.36■□□□□ 0.53
C13orf42-202ENST00000563710 MRC2Q9UBG0 1479 aa18.35■□□□□ 0.53
C13orf42-202ENST00000563710 EEA1Q15075 1411 aa18.35■□□□□ 0.53
C13orf42-202ENST00000563710 WDR62O43379 1518 aa18.33■□□□□ 0.53
C13orf42-202ENST00000563710 THOC2Q8NI27 1593 aaKnown RBP18.33■□□□□ 0.52
C13orf42-202ENST00000563710 WDR97A6NE52 1622 aa18.3■□□□□ 0.52
C13orf42-202ENST00000563710 FGD5Q6ZNL6 1462 aa18.3■□□□□ 0.52
C13orf42-202ENST00000563710 POLA1P09884 1462 aaPredicted RBP18.25■□□□□ 0.51
C13orf42-202ENST00000563710 ERCC6Q03468 1493 aa18.24■□□□□ 0.51
C13orf42-202ENST00000563710 ABCA10Q8WWZ4 1543 aa18.22■□□□□ 0.51
C13orf42-202ENST00000563710 TARBP1Q13395 1621 aaKnown RBP18.2■□□□□ 0.5
C13orf42-202ENST00000563710 SOGA1O94964 1423 aa18.2■□□□□ 0.5
C13orf42-202ENST00000563710 KIF21BO75037 1637 aa18.15■□□□□ 0.5
C13orf42-202ENST00000563710 KIF27Q86VH2 1401 aa18.15■□□□□ 0.5
C13orf42-202ENST00000563710 ABCA5Q8WWZ7 1642 aa18.15■□□□□ 0.5
C13orf42-202ENST00000563710 RUSC2Q8N2Y8 1516 aa18.13■□□□□ 0.49
C13orf42-202ENST00000563710 CUX2O14529 1486 aa18.12■□□□□ 0.49
C13orf42-202ENST00000563710 IFT140Q96RY7 1462 aa18.11■□□□□ 0.49
C13orf42-202ENST00000563710 RAD54L2Q9Y4B4 1467 aa18.09■□□□□ 0.49
C13orf42-202ENST00000563710 ERICH3Q5RHP9 1530 aa18.07■□□□□ 0.48
C13orf42-202ENST00000563710 CUL7Q14999 1698 aa18.06■□□□□ 0.48
C13orf42-202ENST00000563710 CSRNP3Q8WYN3 585 aa18.04■□□□□ 0.48
C13orf42-202ENST00000563710 PBRM1Q86U86 1689 aa18.04■□□□□ 0.48
C13orf42-202ENST00000563710 PRXQ9BXM0 1461 aa18.03■□□□□ 0.48
C13orf42-202ENST00000563710 GOLGA3Q08378 1498 aa17.99■□□□□ 0.47
C13orf42-202ENST00000563710 GAPVD1Q14C86 1478 aa17.98■□□□□ 0.47
C13orf42-202ENST00000563710 IGF1RP08069 1367 aa17.96■□□□□ 0.47
C13orf42-202ENST00000563710 EIF4G3O43432 1585 aaKnown RBP17.96■□□□□ 0.47
C13orf42-202ENST00000563710 FAM9AQ8IZU1 332 aaPredicted RBP17.95■□□□□ 0.46
C13orf42-202ENST00000563710 GRIN2BQ13224 1484 aa17.9■□□□□ 0.46
C13orf42-202ENST00000563710 ADAMTS12P58397 1594 aa17.9■□□□□ 0.46
C13orf42-202ENST00000563710 RAPGEF2Q9Y4G8 1499 aa17.89■□□□□ 0.45
C13orf42-202ENST00000563710 TNIKQ9UKE5 1360 aa17.89■□□□□ 0.45
C13orf42-202ENST00000563710 ZNF608Q9ULD9 1512 aaPredicted RBP17.88■□□□□ 0.45
C13orf42-202ENST00000563710 TDRD9Q8NDG6 1382 aaKnown RBP17.87■□□□□ 0.45
C13orf42-202ENST00000563710 CARMIL1Q5VZK9 1371 aa17.86■□□□□ 0.45
C13orf42-202ENST00000563710 LOC105371045A0A1W2PR82 267 aa17.85■□□□□ 0.45
C13orf42-202ENST00000563710 MAGI1Q96QZ7 1491 aaPredicted RBP17.83■□□□□ 0.44
C13orf42-202ENST00000563710 CTTNBP2Q8WZ74 1663 aa17.83■□□□□ 0.44
C13orf42-202ENST00000563710 AQRO60306 1485 aaKnown RBP eCLIP17.83■□□□□ 0.44
C13orf42-202ENST00000563710 FHAD1B1AJZ9 1412 aa17.82■□□□□ 0.44
C13orf42-202ENST00000563710 SNAPC4Q5SXM2 1469 aa17.75■□□□□ 0.43
C13orf42-202ENST00000563710 SYNJ2O15056 1496 aa17.72■□□□□ 0.43
C13orf42-202ENST00000563710 CEP162Q5TB80 1403 aa17.72■□□□□ 0.43
C13orf42-202ENST00000563710 GRIN2AQ12879 1464 aa17.68■□□□□ 0.42
C13orf42-202ENST00000563710 UBTFP17480 764 aaKnown RBP17.67■□□□□ 0.42
C13orf42-202ENST00000563710 EFCAB5A4FU69 1503 aa17.64■□□□□ 0.42
C13orf42-202ENST00000563710 CHD1O14646 1710 aa17.62■□□□□ 0.41
C13orf42-202ENST00000563710 CLIP1P30622 1438 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms