RNA–Protein interactions for RNA: ENST00000563665.3

ZNF688-204, Transcript of zinc finger protein 688, humanhuman

TSL 1 (best)

Gene ZNF688, Length 1,414 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF688-204ENST00000563665 NISCHQ9Y2I1 1504 aa54.68■■■■■ 6.34
ZNF688-204ENST00000563665 CCDC180Q9P1Z9 1646 aa48.06■■■■■ 5.28
ZNF688-204ENST00000563665 ZCCHC6Q5VYS8 1495 aaKnown RBP45.88■■■■■ 4.94
ZNF688-204ENST00000563665 ABCC9O60706 1549 aa45.51■■■■■ 4.88
ZNF688-204ENST00000563665 DCAF1Q9Y4B6 1507 aa45.35■■■■■ 4.85
ZNF688-204ENST00000563665 MYO15BQ96JP2 1530 aa45■■■■■ 4.79
ZNF688-204ENST00000563665 DCAF8L2P0C7V8 631 aa44.92■■■■■ 4.78
ZNF688-204ENST00000563665 NACADO15069 1562 aa44.78■■■■■ 4.76
ZNF688-204ENST00000563665 RB1CC1Q8TDY2 1594 aa44.47■■■■■ 4.71
ZNF688-204ENST00000563665 SHROOM4Q9ULL8 1493 aa43.99■■■■■ 4.63
ZNF688-204ENST00000563665 SCRIBQ14160 1630 aa43.9■■■■■ 4.62
ZNF688-204ENST00000563665 UNC13AQ9UPW8 1703 aa43.59■■■■■ 4.57
ZNF688-204ENST00000563665 BICRAQ9NZM4 1560 aa43.1■■■■■ 4.49
ZNF688-204ENST00000563665 PABPN1Q86U42 306 aaKnown RBP eCLIP42.71■■■■■ 4.43
ZNF688-204ENST00000563665 CECR2Q9BXF3 1484 aa42.4■■■■■ 4.38
ZNF688-204ENST00000563665 BAZ1AQ9NRL2 1556 aaPredicted RBP42.29■■■■■ 4.36
ZNF688-204ENST00000563665 RSF1Q96T23 1441 aaPredicted RBP42.17■■■■■ 4.34
ZNF688-204ENST00000563665 SMARCA4P51532 1647 aa42.16■■■■■ 4.34
ZNF688-204ENST00000563665 MROH2BQ7Z745 1585 aa42.15■■■■■ 4.34
ZNF688-204ENST00000563665 SUPT5HO00267 1087 aaKnown RBP42.1■■■■■ 4.33
ZNF688-204ENST00000563665 EIF4G1Q04637 1599 aaKnown RBP41.82■■■■■ 4.29
ZNF688-204ENST00000563665 WIZO95785 1651 aa41.81■■■■■ 4.28
ZNF688-204ENST00000563665 PEG3Q9GZU2 1588 aa41.74■■■■■ 4.27
ZNF688-204ENST00000563665 SMARCA2P51531 1590 aa41.56■■■■■ 4.24
ZNF688-204ENST00000563665 ATAD2BQ9ULI0 1458 aa41.51■■■■■ 4.24
ZNF688-204ENST00000563665 TOP2AP11388 1531 aaKnown RBP41.45■■■■■ 4.23
ZNF688-204ENST00000563665 CC2D2AQ9P2K1 1620 aa41.29■■■■■ 4.2
ZNF688-204ENST00000563665 NCAPD3P42695 1498 aa41.27■■■■■ 4.2
ZNF688-204ENST00000563665 HMGXB3Q12766 1538 aa41.26■■■■■ 4.19
ZNF688-204ENST00000563665 BAZ1BQ9UIG0 1483 aaKnown RBP41.25■■■■■ 4.19
ZNF688-204ENST00000563665 CCDC88BA6NC98 1476 aa40.91■■■■■ 4.14
ZNF688-204ENST00000563665 DNAJC5BQ9UF47 199 aa40.41■■■■■ 4.06
ZNF688-204ENST00000563665 CFTRP13569 1480 aa40.22■■■■■ 4.03
ZNF688-204ENST00000563665 CHIC1Q5VXU3 224 aa40.19■■■■■ 4.02
ZNF688-204ENST00000563665 PRDM2Q13029 1718 aa40.19■■■■■ 4.02
ZNF688-204ENST00000563665 CADPSQ9ULU8 1353 aa40.11■■■■■ 4.01
ZNF688-204ENST00000563665 LAMC3Q9Y6N6 1575 aa39.99■■■■□ 3.99
ZNF688-204ENST00000563665 ABCC8Q09428 1581 aa39.87■■■■□ 3.97
ZNF688-204ENST00000563665 NESP48681 1621 aa39.83■■■■□ 3.97
ZNF688-204ENST00000563665 WRNQ14191 1432 aaPredicted RBP eCLIP39.72■■■■□ 3.95
ZNF688-204ENST00000563665 TRIM41Q8WV44 630 aa39.71■■■■□ 3.95
ZNF688-204ENST00000563665 FANCD2Q9BXW9 1451 aa39.68■■■■□ 3.94
ZNF688-204ENST00000563665 SYNJ1O43426 1573 aa39.61■■■■□ 3.93
ZNF688-204ENST00000563665 PDS5BQ9NTI5 1447 aa39.6■■■■□ 3.93
ZNF688-204ENST00000563665 BIVM-ERCC5R4GMW8 1640 aa39.57■■■■□ 3.92
ZNF688-204ENST00000563665 TOP2BQ02880 1626 aa39.55■■■■□ 3.92
ZNF688-204ENST00000563665 CEP164Q9UPV0 1460 aa39.5■■■■□ 3.91
ZNF688-204ENST00000563665 KIF21AQ7Z4S6 1674 aa39.49■■■■□ 3.91
ZNF688-204ENST00000563665 CUX1P39880 1505 aa39.48■■■■□ 3.91
ZNF688-204ENST00000563665 DNMBPQ6XZF7 1577 aa39.33■■■■□ 3.89
ZNF688-204ENST00000563665 TOPBP1Q92547 1522 aa39.23■■■■□ 3.87
ZNF688-204ENST00000563665 URB2Q14146 1524 aaKnown RBP39.21■■■■□ 3.87
ZNF688-204ENST00000563665 MRC2Q9UBG0 1479 aa39.15■■■■□ 3.86
ZNF688-204ENST00000563665 ERCC6Q03468 1493 aa39.11■■■■□ 3.85
ZNF688-204ENST00000563665 FGD5Q6ZNL6 1462 aa39.1■■■■□ 3.85
ZNF688-204ENST00000563665 EEA1Q15075 1411 aa39.04■■■■□ 3.84
ZNF688-204ENST00000563665 WDR62O43379 1518 aa39■■■■□ 3.83
ZNF688-204ENST00000563665 SOGA1O94964 1423 aa39■■■■□ 3.83
ZNF688-204ENST00000563665 THOC2Q8NI27 1593 aaKnown RBP38.99■■■■□ 3.83
ZNF688-204ENST00000563665 POLA1P09884 1462 aaPredicted RBP38.99■■■■□ 3.83
ZNF688-204ENST00000563665 RUSC2Q8N2Y8 1516 aa38.86■■■■□ 3.81
ZNF688-204ENST00000563665 FAM9AQ8IZU1 332 aaPredicted RBP38.83■■■■□ 3.81
ZNF688-204ENST00000563665 WDR97A6NE52 1622 aa38.81■■■■□ 3.8
ZNF688-204ENST00000563665 ABCA10Q8WWZ4 1543 aa38.81■■■■□ 3.8
ZNF688-204ENST00000563665 KIF27Q86VH2 1401 aa38.77■■■■□ 3.8
ZNF688-204ENST00000563665 RAD54L2Q9Y4B4 1467 aa38.76■■■■□ 3.8
ZNF688-204ENST00000563665 CUX2O14529 1486 aa38.73■■■■□ 3.79
ZNF688-204ENST00000563665 TARBP1Q13395 1621 aaKnown RBP38.72■■■■□ 3.79
ZNF688-204ENST00000563665 CSRNP3Q8WYN3 585 aa38.68■■■■□ 3.78
ZNF688-204ENST00000563665 IFT140Q96RY7 1462 aa38.61■■■■□ 3.77
ZNF688-204ENST00000563665 ABCA5Q8WWZ7 1642 aa38.57■■■■□ 3.76
ZNF688-204ENST00000563665 KIF21BO75037 1637 aa38.56■■■■□ 3.76
ZNF688-204ENST00000563665 LOC105371045A0A1W2PR82 267 aa38.5■■■■□ 3.75
ZNF688-204ENST00000563665 PRXQ9BXM0 1461 aa38.42■■■■□ 3.74
ZNF688-204ENST00000563665 IGF1RP08069 1367 aa38.42■■■■□ 3.74
ZNF688-204ENST00000563665 GAPVD1Q14C86 1478 aa38.42■■■■□ 3.74
ZNF688-204ENST00000563665 GOLGA3Q08378 1498 aa38.4■■■■□ 3.74
ZNF688-204ENST00000563665 ERICH3Q5RHP9 1530 aa38.39■■■■□ 3.74
ZNF688-204ENST00000563665 TDRD9Q8NDG6 1382 aaKnown RBP38.39■■■■□ 3.74
ZNF688-204ENST00000563665 CUL7Q14999 1698 aa38.35■■■■□ 3.73
ZNF688-204ENST00000563665 PBRM1Q86U86 1689 aa38.34■■■■□ 3.73
ZNF688-204ENST00000563665 ZNF608Q9ULD9 1512 aaPredicted RBP38.29■■■■□ 3.72
ZNF688-204ENST00000563665 EIF4G3O43432 1585 aaKnown RBP38.28■■■■□ 3.72
ZNF688-204ENST00000563665 RAPGEF2Q9Y4G8 1499 aa38.27■■■■□ 3.72
ZNF688-204ENST00000563665 AQRO60306 1485 aaKnown RBP eCLIP38.24■■■■□ 3.71
ZNF688-204ENST00000563665 CARMIL1Q5VZK9 1371 aa38.22■■■■□ 3.71
ZNF688-204ENST00000563665 GRIN2BQ13224 1484 aa38.21■■■■□ 3.71
ZNF688-204ENST00000563665 EHMT2Q96KQ7 1210 aa38.18■■■■□ 3.7
ZNF688-204ENST00000563665 TNIKQ9UKE5 1360 aa38.17■■■■□ 3.7
ZNF688-204ENST00000563665 ADAMTS12P58397 1594 aa38.08■■■■□ 3.69
ZNF688-204ENST00000563665 UBTFP17480 764 aaKnown RBP38.06■■■■□ 3.68
ZNF688-204ENST00000563665 FHAD1B1AJZ9 1412 aa38.02■■■■□ 3.68
ZNF688-204ENST00000563665 MAGI1Q96QZ7 1491 aaPredicted RBP37.98■■■■□ 3.67
ZNF688-204ENST00000563665 SNAPC4Q5SXM2 1469 aa37.96■■■■□ 3.67
ZNF688-204ENST00000563665 CEP162Q5TB80 1403 aa37.91■■■■□ 3.66
ZNF688-204ENST00000563665 CTTNBP2Q8WZ74 1663 aa37.87■■■■□ 3.65
ZNF688-204ENST00000563665 SYNJ2O15056 1496 aa37.8■■■■□ 3.64
ZNF688-204ENST00000563665 GRIN2AQ12879 1464 aa37.74■■■■□ 3.63
ZNF688-204ENST00000563665 CLIP1P30622 1438 aa37.71■■■■□ 3.63
ZNF688-204ENST00000563665 CHMP7Q8WUX9 453 aaPredicted RBP37.58■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms