RNA–Protein interactions for RNA: ENST00000563651.5

MSLN-204, Transcript of mesothelin, humanhuman

TSL 5

Gene MSLN, Length 1,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-204ENST00000563651 NISCHQ9Y2I1 1504 aa48.61■■■■■ 5.37
MSLN-204ENST00000563651 CCDC180Q9P1Z9 1646 aa43.56■■■■■ 4.56
MSLN-204ENST00000563651 ABCC9O60706 1549 aa43.34■■■■■ 4.53
MSLN-204ENST00000563651 RB1CC1Q8TDY2 1594 aa41.42■■■■■ 4.22
MSLN-204ENST00000563651 NACADO15069 1562 aa41.19■■■■■ 4.18
MSLN-204ENST00000563651 DCAF8L2P0C7V8 631 aa41.07■■■■■ 4.17
MSLN-204ENST00000563651 MYO15BQ96JP2 1530 aa40.7■■■■■ 4.11
MSLN-204ENST00000563651 PABPN1Q86U42 306 aaKnown RBP eCLIP40.38■■■■■ 4.05
MSLN-204ENST00000563651 DNAJC5BQ9UF47 199 aa40.36■■■■■ 4.05
MSLN-204ENST00000563651 ZCCHC6Q5VYS8 1495 aaKnown RBP40.32■■■■■ 4.04
MSLN-204ENST00000563651 UNC13AQ9UPW8 1703 aa40.27■■■■■ 4.04
MSLN-204ENST00000563651 DCAF1Q9Y4B6 1507 aa40.21■■■■■ 4.03
MSLN-204ENST00000563651 BICRAQ9NZM4 1560 aa40.03■■■■■ 4
MSLN-204ENST00000563651 SHROOM4Q9ULL8 1493 aa39.75■■■■□ 3.95
MSLN-204ENST00000563651 SCRIBQ14160 1630 aa39.65■■■■□ 3.94
MSLN-204ENST00000563651 CC2D2AQ9P2K1 1620 aa39.14■■■■□ 3.86
MSLN-204ENST00000563651 EIF4G1Q04637 1599 aaKnown RBP39.13■■■■□ 3.85
MSLN-204ENST00000563651 CECR2Q9BXF3 1484 aa39.07■■■■□ 3.85
MSLN-204ENST00000563651 NCAPD3P42695 1498 aa38■■■■□ 3.67
MSLN-204ENST00000563651 ATAD2BQ9ULI0 1458 aa37.87■■■■□ 3.65
MSLN-204ENST00000563651 SMARCA4P51532 1647 aa37.86■■■■□ 3.65
MSLN-204ENST00000563651 SMARCA2P51531 1590 aa37.85■■■■□ 3.65
MSLN-204ENST00000563651 BAZ1AQ9NRL2 1556 aaPredicted RBP37.79■■■■□ 3.64
MSLN-204ENST00000563651 HMGXB3Q12766 1538 aa37.73■■■■□ 3.63
MSLN-204ENST00000563651 BAZ1BQ9UIG0 1483 aaKnown RBP37.58■■■■□ 3.61
MSLN-204ENST00000563651 ERCC6Q03468 1493 aa37.52■■■■□ 3.6
MSLN-204ENST00000563651 PEG3Q9GZU2 1588 aa37.51■■■■□ 3.6
MSLN-204ENST00000563651 MROH2BQ7Z745 1585 aa37.4■■■■□ 3.58
MSLN-204ENST00000563651 CUX2O14529 1486 aa37.37■■■■□ 3.57
MSLN-204ENST00000563651 NESP48681 1621 aa37.22■■■■□ 3.55
MSLN-204ENST00000563651 LAMC3Q9Y6N6 1575 aa37.12■■■■□ 3.53
MSLN-204ENST00000563651 DNAJC5Q9H3Z4 198 aa37.1■■■■□ 3.53
MSLN-204ENST00000563651 PDS5BQ9NTI5 1447 aa36.98■■■■□ 3.51
MSLN-204ENST00000563651 WIZO95785 1651 aa36.94■■■■□ 3.5
MSLN-204ENST00000563651 CADPSQ9ULU8 1353 aa36.87■■■■□ 3.49
MSLN-204ENST00000563651 THOC2Q8NI27 1593 aaKnown RBP36.82■■■■□ 3.48
MSLN-204ENST00000563651 KIF21AQ7Z4S6 1674 aa36.74■■■■□ 3.47
MSLN-204ENST00000563651 RSF1Q96T23 1441 aaPredicted RBP36.74■■■■□ 3.47
MSLN-204ENST00000563651 TOP2AP11388 1531 aaKnown RBP36.58■■■■□ 3.45
MSLN-204ENST00000563651 MRC2Q9UBG0 1479 aa36.57■■■■□ 3.45
MSLN-204ENST00000563651 CEP164Q9UPV0 1460 aa36.49■■■■□ 3.43
MSLN-204ENST00000563651 CFTRP13569 1480 aa36.46■■■■□ 3.43
MSLN-204ENST00000563651 WDR62O43379 1518 aa36.43■■■■□ 3.42
MSLN-204ENST00000563651 FANCD2Q9BXW9 1451 aa36.43■■■■□ 3.42
MSLN-204ENST00000563651 CCDC88BA6NC98 1476 aa36.13■■■■□ 3.37
MSLN-204ENST00000563651 PRDM2Q13029 1718 aa36.05■■■■□ 3.36
MSLN-204ENST00000563651 URB2Q14146 1524 aaKnown RBP36.03■■■■□ 3.36
MSLN-204ENST00000563651 ABCC8Q09428 1581 aa35.81■■■■□ 3.32
MSLN-204ENST00000563651 IFT140Q96RY7 1462 aa35.76■■■■□ 3.32
MSLN-204ENST00000563651 OSCARQ8IYS5 282 aa35.75■■■■□ 3.31
MSLN-204ENST00000563651 TOPBP1Q92547 1522 aa35.73■■■■□ 3.31
MSLN-204ENST00000563651 DNMBPQ6XZF7 1577 aa35.64■■■■□ 3.3
MSLN-204ENST00000563651 TRIM41Q8WV44 630 aa35.57■■■■□ 3.28
MSLN-204ENST00000563651 ZNF608Q9ULD9 1512 aaPredicted RBP35.55■■■■□ 3.28
MSLN-204ENST00000563651 EIF4G3O43432 1585 aaKnown RBP35.4■■■■□ 3.26
MSLN-204ENST00000563651 POLA1P09884 1462 aaPredicted RBP35.37■■■■□ 3.25
MSLN-204ENST00000563651 TARBP1Q13395 1621 aaKnown RBP35.35■■■■□ 3.25
MSLN-204ENST00000563651 SUPT5HO00267 1087 aaKnown RBP35.33■■■■□ 3.25
MSLN-204ENST00000563651 AQRO60306 1485 aaKnown RBP eCLIP35.3■■■■□ 3.24
MSLN-204ENST00000563651 SOGA1O94964 1423 aa35.28■■■■□ 3.24
MSLN-204ENST00000563651 RAD54L2Q9Y4B4 1467 aa35.2■■■■□ 3.23
MSLN-204ENST00000563651 FGD5Q6ZNL6 1462 aa35.19■■■■□ 3.22
MSLN-204ENST00000563651 FBLN2P98095 1184 aa35.16■■■■□ 3.22
MSLN-204ENST00000563651 TDRD9Q8NDG6 1382 aaKnown RBP35.14■■■■□ 3.22
MSLN-204ENST00000563651 WDR97A6NE52 1622 aa35.14■■■■□ 3.22
MSLN-204ENST00000563651 CUX1P39880 1505 aa35.13■■■■□ 3.21
MSLN-204ENST00000563651 RIMBP3CA6NJZ7 1639 aa35.1■■■■□ 3.21
MSLN-204ENST00000563651 RIMBP3BA6NNM3 1639 aa35.1■■■■□ 3.21
MSLN-204ENST00000563651 RIMBP3Q9UFD9 1639 aa35.1■■■■□ 3.21
MSLN-204ENST00000563651 CHD1O14646 1710 aa35.06■■■■□ 3.2
MSLN-204ENST00000563651 ARHGEF11O15085 1522 aa35.05■■■■□ 3.2
MSLN-204ENST00000563651 GRIN2BQ13224 1484 aa34.97■■■■□ 3.19
MSLN-204ENST00000563651 SNAPC4Q5SXM2 1469 aa34.97■■■■□ 3.19
MSLN-204ENST00000563651 CHMP7Q8WUX9 453 aaPredicted RBP34.96■■■■□ 3.19
MSLN-204ENST00000563651 MAGI1Q96QZ7 1491 aaPredicted RBP34.96■■■■□ 3.19
MSLN-204ENST00000563651 GAPVD1Q14C86 1478 aa34.84■■■■□ 3.17
MSLN-204ENST00000563651 CYB5RLQ6IPT4 315 aa34.84■■■■□ 3.17
MSLN-204ENST00000563651 ABCA10Q8WWZ4 1543 aa34.82■■■■□ 3.16
MSLN-204ENST00000563651 SYNJ2O15056 1496 aa34.82■■■■□ 3.16
MSLN-204ENST00000563651 WRNQ14191 1432 aaPredicted RBP eCLIP34.81■■■■□ 3.16
MSLN-204ENST00000563651 SYNJ1O43426 1573 aa34.8■■■■□ 3.16
MSLN-204ENST00000563651 PBRM1Q86U86 1689 aa34.73■■■■□ 3.15
MSLN-204ENST00000563651 CLASP1Q7Z460 1538 aa34.69■■■■□ 3.14
MSLN-204ENST00000563651 ABCA5Q8WWZ7 1642 aa34.69■■■■□ 3.14
MSLN-204ENST00000563651 TOP2BQ02880 1626 aa34.68■■■■□ 3.14
MSLN-204ENST00000563651 ARAP1Q96P48 1450 aa34.68■■■■□ 3.14
MSLN-204ENST00000563651 BIVM-ERCC5R4GMW8 1640 aa34.65■■■■□ 3.14
MSLN-204ENST00000563651 GRIN2AQ12879 1464 aa34.47■■■■□ 3.11
MSLN-204ENST00000563651 TRHP20396 242 aaPredicted RBP34.47■■■■□ 3.11
MSLN-204ENST00000563651 FHAD1B1AJZ9 1412 aa34.44■■■■□ 3.1
MSLN-204ENST00000563651 ADAMTS12P58397 1594 aa34.43■■■■□ 3.1
MSLN-204ENST00000563651 ERICH3Q5RHP9 1530 aa34.42■■■■□ 3.1
MSLN-204ENST00000563651 NUP160Q12769 1436 aa34.33■■■■□ 3.09
MSLN-204ENST00000563651 CEP170Q5SW79 1584 aa34.27■■■■□ 3.08
MSLN-204ENST00000563651 SHROOM2Q13796 1616 aa34.12■■■■□ 3.05
MSLN-204ENST00000563651 KIF27Q86VH2 1401 aa34.11■■■■□ 3.05
MSLN-204ENST00000563651 ERCC6L2Q5T890 1561 aa34.08■■■■□ 3.05
MSLN-204ENST00000563651 JPH4Q96JJ6 628 aa34.05■■■■□ 3.04
MSLN-204ENST00000563651 PRG4Q92954 1404 aaPredicted RBP34.04■■■■□ 3.04
MSLN-204ENST00000563651 IGF1RP08069 1367 aa33.98■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms