RNA–Protein interactions for RNA: ENST00000563616.1

SLX1A-203, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

TSL 2

Gene SLX1A, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-203ENST00000563616 NISCHQ9Y2I1 1504 aa30.14■■■□□ 2.42
SLX1A-203ENST00000563616 ABCC9O60706 1549 aa27.73■■■□□ 2.03
SLX1A-203ENST00000563616 CCDC180Q9P1Z9 1646 aa27.27■■□□□ 1.96
SLX1A-203ENST00000563616 DNAJC5BQ9UF47 199 aa26.43■■□□□ 1.82
SLX1A-203ENST00000563616 RB1CC1Q8TDY2 1594 aa26.18■■□□□ 1.78
SLX1A-203ENST00000563616 NACADO15069 1562 aa25.88■■□□□ 1.73
SLX1A-203ENST00000563616 PABPN1Q86U42 306 aaKnown RBP eCLIP25.73■■□□□ 1.71
SLX1A-203ENST00000563616 UNC13AQ9UPW8 1703 aa25.63■■□□□ 1.69
SLX1A-203ENST00000563616 DCAF8L2P0C7V8 631 aa25.62■■□□□ 1.69
SLX1A-203ENST00000563616 BICRAQ9NZM4 1560 aa25.45■■□□□ 1.66
SLX1A-203ENST00000563616 MYO15BQ96JP2 1530 aa25.37■■□□□ 1.65
SLX1A-203ENST00000563616 SHROOM4Q9ULL8 1493 aa25.05■■□□□ 1.6
SLX1A-203ENST00000563616 CECR2Q9BXF3 1484 aa25.03■■□□□ 1.6
SLX1A-203ENST00000563616 CC2D2AQ9P2K1 1620 aa25.03■■□□□ 1.6
SLX1A-203ENST00000563616 ZCCHC6Q5VYS8 1495 aaKnown RBP24.89■■□□□ 1.57
SLX1A-203ENST00000563616 DCAF1Q9Y4B6 1507 aa24.86■■□□□ 1.57
SLX1A-203ENST00000563616 EIF4G1Q04637 1599 aaKnown RBP24.86■■□□□ 1.57
SLX1A-203ENST00000563616 SCRIBQ14160 1630 aa24.83■■□□□ 1.56
SLX1A-203ENST00000563616 DNAJC5Q9H3Z4 198 aa24.61■■□□□ 1.53
SLX1A-203ENST00000563616 CUX2O14529 1486 aa24.09■■□□□ 1.45
SLX1A-203ENST00000563616 ERCC6Q03468 1493 aa23.98■■□□□ 1.43
SLX1A-203ENST00000563616 NCAPD3P42695 1498 aa23.9■■□□□ 1.42
SLX1A-203ENST00000563616 ATAD2BQ9ULI0 1458 aa23.76■■□□□ 1.39
SLX1A-203ENST00000563616 NESP48681 1621 aa23.7■■□□□ 1.38
SLX1A-203ENST00000563616 HMGXB3Q12766 1538 aa23.69■■□□□ 1.38
SLX1A-203ENST00000563616 SMARCA2P51531 1590 aa23.67■■□□□ 1.38
SLX1A-203ENST00000563616 SMARCA4P51532 1647 aa23.62■■□□□ 1.37
SLX1A-203ENST00000563616 THOC2Q8NI27 1593 aaKnown RBP23.56■■□□□ 1.36
SLX1A-203ENST00000563616 BAZ1BQ9UIG0 1483 aaKnown RBP23.51■■□□□ 1.35
SLX1A-203ENST00000563616 LAMC3Q9Y6N6 1575 aa23.44■■□□□ 1.34
SLX1A-203ENST00000563616 BAZ1AQ9NRL2 1556 aaPredicted RBP23.43■■□□□ 1.34
SLX1A-203ENST00000563616 PEG3Q9GZU2 1588 aa23.4■■□□□ 1.34
SLX1A-203ENST00000563616 KIF21AQ7Z4S6 1674 aa23.38■■□□□ 1.33
SLX1A-203ENST00000563616 TRIM41Q8WV44 630 aa23.34■■□□□ 1.33
SLX1A-203ENST00000563616 PDS5BQ9NTI5 1447 aa23.31■■□□□ 1.32
SLX1A-203ENST00000563616 MROH2BQ7Z745 1585 aa23.23■■□□□ 1.31
SLX1A-203ENST00000563616 MRC2Q9UBG0 1479 aa23.15■■□□□ 1.3
SLX1A-203ENST00000563616 CADPSQ9ULU8 1353 aa23.14■■□□□ 1.3
SLX1A-203ENST00000563616 WDR62O43379 1518 aa23.12■■□□□ 1.29
SLX1A-203ENST00000563616 CEP164Q9UPV0 1460 aa22.96■■□□□ 1.27
SLX1A-203ENST00000563616 WIZO95785 1651 aa22.93■■□□□ 1.26
SLX1A-203ENST00000563616 FANCD2Q9BXW9 1451 aa22.9■■□□□ 1.26
SLX1A-203ENST00000563616 OSCARQ8IYS5 282 aa22.89■■□□□ 1.25
SLX1A-203ENST00000563616 CFTRP13569 1480 aa22.79■■□□□ 1.24
SLX1A-203ENST00000563616 URB2Q14146 1524 aaKnown RBP22.75■■□□□ 1.23
SLX1A-203ENST00000563616 RIMBP3CA6NJZ7 1639 aa22.68■■□□□ 1.22
SLX1A-203ENST00000563616 RIMBP3BA6NNM3 1639 aa22.68■■□□□ 1.22
SLX1A-203ENST00000563616 RIMBP3Q9UFD9 1639 aa22.68■■□□□ 1.22
SLX1A-203ENST00000563616 TOP2AP11388 1531 aaKnown RBP22.61■■□□□ 1.21
SLX1A-203ENST00000563616 RSF1Q96T23 1441 aaPredicted RBP22.57■■□□□ 1.2
SLX1A-203ENST00000563616 ARHGEF11O15085 1522 aa22.56■■□□□ 1.2
SLX1A-203ENST00000563616 ZNF608Q9ULD9 1512 aaPredicted RBP22.55■■□□□ 1.2
SLX1A-203ENST00000563616 PRDM2Q13029 1718 aa22.54■■□□□ 1.2
SLX1A-203ENST00000563616 IFT140Q96RY7 1462 aa22.53■■□□□ 1.2
SLX1A-203ENST00000563616 TOPBP1Q92547 1522 aa22.41■■□□□ 1.18
SLX1A-203ENST00000563616 CYB5RLQ6IPT4 315 aa22.4■■□□□ 1.18
SLX1A-203ENST00000563616 EIF4G3O43432 1585 aaKnown RBP22.4■■□□□ 1.18
SLX1A-203ENST00000563616 CCDC88BA6NC98 1476 aa22.34■■□□□ 1.17
SLX1A-203ENST00000563616 CHD1O14646 1710 aa22.34■■□□□ 1.17
SLX1A-203ENST00000563616 ABCC8Q09428 1581 aa22.31■■□□□ 1.16
SLX1A-203ENST00000563616 ARAP1Q96P48 1450 aa22.3■■□□□ 1.16
SLX1A-203ENST00000563616 TRHP20396 242 aaPredicted RBP22.29■■□□□ 1.16
SLX1A-203ENST00000563616 DNMBPQ6XZF7 1577 aa22.29■■□□□ 1.16
SLX1A-203ENST00000563616 AQRO60306 1485 aaKnown RBP eCLIP22.27■■□□□ 1.16
SLX1A-203ENST00000563616 TARBP1Q13395 1621 aaKnown RBP22.26■■□□□ 1.15
SLX1A-203ENST00000563616 FBLN2P98095 1184 aa22.2■■□□□ 1.14
SLX1A-203ENST00000563616 POLA1P09884 1462 aaPredicted RBP22.15■■□□□ 1.14
SLX1A-203ENST00000563616 RAD54L2Q9Y4B4 1467 aa22.08■■□□□ 1.12
SLX1A-203ENST00000563616 TDRD9Q8NDG6 1382 aaKnown RBP22.06■■□□□ 1.12
SLX1A-203ENST00000563616 CLASP1Q7Z460 1538 aa22.06■■□□□ 1.12
SLX1A-203ENST00000563616 SNAPC4Q5SXM2 1469 aa22.03■■□□□ 1.12
SLX1A-203ENST00000563616 SOGA1O94964 1423 aa22.02■■□□□ 1.12
SLX1A-203ENST00000563616 AEBP2Q6ZN18 517 aaPredicted RBP21.99■■□□□ 1.11
SLX1A-203ENST00000563616 SYNJ1O43426 1573 aa21.99■■□□□ 1.11
SLX1A-203ENST00000563616 WDR97A6NE52 1622 aa21.98■■□□□ 1.11
SLX1A-203ENST00000563616 CHMP7Q8WUX9 453 aaPredicted RBP21.96■■□□□ 1.11
SLX1A-203ENST00000563616 MAGI1Q96QZ7 1491 aaPredicted RBP21.96■■□□□ 1.11
SLX1A-203ENST00000563616 FGD5Q6ZNL6 1462 aa21.95■■□□□ 1.1
SLX1A-203ENST00000563616 GRIN2BQ13224 1484 aa21.9■■□□□ 1.1
SLX1A-203ENST00000563616 SYNJ2O15056 1496 aa21.89■■□□□ 1.09
SLX1A-203ENST00000563616 CUX1P39880 1505 aa21.85■■□□□ 1.09
SLX1A-203ENST00000563616 GAPVD1Q14C86 1478 aa21.84■■□□□ 1.09
SLX1A-203ENST00000563616 PBRM1Q86U86 1689 aa21.8■■□□□ 1.08
SLX1A-203ENST00000563616 ABCA5Q8WWZ7 1642 aa21.69■■□□□ 1.06
SLX1A-203ENST00000563616 ERCC6L2Q5T890 1561 aa21.68■■□□□ 1.06
SLX1A-203ENST00000563616 ABCA10Q8WWZ4 1543 aa21.66■■□□□ 1.06
SLX1A-203ENST00000563616 GRIN2AQ12879 1464 aa21.63■■□□□ 1.05
SLX1A-203ENST00000563616 CEP170Q5SW79 1584 aa21.6■■□□□ 1.05
SLX1A-203ENST00000563616 NUP160Q12769 1436 aa21.57■■□□□ 1.04
SLX1A-203ENST00000563616 ADAMTS12P58397 1594 aa21.57■■□□□ 1.04
SLX1A-203ENST00000563616 KIF13AQ9H1H9 1805 aa21.54■■□□□ 1.04
SLX1A-203ENST00000563616 SHROOM2Q13796 1616 aa21.54■■□□□ 1.04
SLX1A-203ENST00000563616 WRNQ14191 1432 aaPredicted RBP eCLIP21.48■■□□□ 1.03
SLX1A-203ENST00000563616 FHAD1B1AJZ9 1412 aa21.46■■□□□ 1.03
SLX1A-203ENST00000563616 PRG4Q92954 1404 aaPredicted RBP21.39■■□□□ 1.02
SLX1A-203ENST00000563616 ERICH3Q5RHP9 1530 aa21.39■■□□□ 1.01
SLX1A-203ENST00000563616 BIVM-ERCC5R4GMW8 1640 aa21.38■■□□□ 1.01
SLX1A-203ENST00000563616 TOP2BQ02880 1626 aa21.37■■□□□ 1.01
SLX1A-203ENST00000563616 ABCC10Q5T3U5 1492 aa21.33■■□□□ 1.01
SLX1A-203ENST00000563616 FAM69CQ0P6D2 419 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms