RNA–Protein interactions for RNA: ENST00000563600.5

BBS4-206, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 4

Gene BBS4, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-206ENST00000563600 NISCHQ9Y2I1 1504 aa35.93■■■■□ 3.34
BBS4-206ENST00000563600 CCDC180Q9P1Z9 1646 aa31.89■■■□□ 2.7
BBS4-206ENST00000563600 ABCC9O60706 1549 aa31.4■■■□□ 2.62
BBS4-206ENST00000563600 DCAF8L2P0C7V8 631 aa30.2■■■□□ 2.43
BBS4-206ENST00000563600 RB1CC1Q8TDY2 1594 aa30.07■■■□□ 2.4
BBS4-206ENST00000563600 NACADO15069 1562 aa30.01■■■□□ 2.39
BBS4-206ENST00000563600 ZCCHC6Q5VYS8 1495 aaKnown RBP29.92■■■□□ 2.38
BBS4-206ENST00000563600 MYO15BQ96JP2 1530 aa29.75■■■□□ 2.35
BBS4-206ENST00000563600 DCAF1Q9Y4B6 1507 aa29.63■■■□□ 2.33
BBS4-206ENST00000563600 UNC13AQ9UPW8 1703 aa29.42■■■□□ 2.3
BBS4-206ENST00000563600 PABPN1Q86U42 306 aaKnown RBP eCLIP29.38■■■□□ 2.29
BBS4-206ENST00000563600 SCRIBQ14160 1630 aa29.24■■■□□ 2.27
BBS4-206ENST00000563600 BICRAQ9NZM4 1560 aa29.2■■■□□ 2.26
BBS4-206ENST00000563600 DNAJC5BQ9UF47 199 aa28.87■■■□□ 2.21
BBS4-206ENST00000563600 SHROOM4Q9ULL8 1493 aa28.76■■■□□ 2.19
BBS4-206ENST00000563600 EIF4G1Q04637 1599 aaKnown RBP28.44■■■□□ 2.14
BBS4-206ENST00000563600 CC2D2AQ9P2K1 1620 aa28.35■■■□□ 2.13
BBS4-206ENST00000563600 CECR2Q9BXF3 1484 aa28.17■■■□□ 2.1
BBS4-206ENST00000563600 SMARCA4P51532 1647 aa27.89■■■□□ 2.06
BBS4-206ENST00000563600 BAZ1AQ9NRL2 1556 aaPredicted RBP27.83■■■□□ 2.05
BBS4-206ENST00000563600 ATAD2BQ9ULI0 1458 aa27.76■■■□□ 2.03
BBS4-206ENST00000563600 MROH2BQ7Z745 1585 aa27.74■■■□□ 2.03
BBS4-206ENST00000563600 NCAPD3P42695 1498 aa27.7■■■□□ 2.03
BBS4-206ENST00000563600 SMARCA2P51531 1590 aa27.69■■■□□ 2.02
BBS4-206ENST00000563600 HMGXB3Q12766 1538 aa27.56■■■□□ 2
BBS4-206ENST00000563600 PEG3Q9GZU2 1588 aa27.55■■■□□ 2
BBS4-206ENST00000563600 BAZ1BQ9UIG0 1483 aaKnown RBP27.54■■■□□ 2
BBS4-206ENST00000563600 WIZO95785 1651 aa27.45■■□□□ 1.98
BBS4-206ENST00000563600 RSF1Q96T23 1441 aaPredicted RBP27.39■■□□□ 1.97
BBS4-206ENST00000563600 NESP48681 1621 aa27.16■■□□□ 1.94
BBS4-206ENST00000563600 TOP2AP11388 1531 aaKnown RBP27.11■■□□□ 1.93
BBS4-206ENST00000563600 ERCC6Q03468 1493 aa27.05■■□□□ 1.92
BBS4-206ENST00000563600 LAMC3Q9Y6N6 1575 aa26.97■■□□□ 1.91
BBS4-206ENST00000563600 CADPSQ9ULU8 1353 aa26.93■■□□□ 1.9
BBS4-206ENST00000563600 PDS5BQ9NTI5 1447 aa26.82■■□□□ 1.88
BBS4-206ENST00000563600 CCDC88BA6NC98 1476 aa26.82■■□□□ 1.88
BBS4-206ENST00000563600 SUPT5HO00267 1087 aaKnown RBP26.8■■□□□ 1.88
BBS4-206ENST00000563600 KIF21AQ7Z4S6 1674 aa26.79■■□□□ 1.88
BBS4-206ENST00000563600 CFTRP13569 1480 aa26.74■■□□□ 1.87
BBS4-206ENST00000563600 THOC2Q8NI27 1593 aaKnown RBP26.69■■□□□ 1.86
BBS4-206ENST00000563600 CUX2O14529 1486 aa26.68■■□□□ 1.86
BBS4-206ENST00000563600 FANCD2Q9BXW9 1451 aa26.65■■□□□ 1.86
BBS4-206ENST00000563600 CEP164Q9UPV0 1460 aa26.62■■□□□ 1.85
BBS4-206ENST00000563600 MRC2Q9UBG0 1479 aa26.57■■□□□ 1.84
BBS4-206ENST00000563600 PRDM2Q13029 1718 aa26.51■■□□□ 1.83
BBS4-206ENST00000563600 WDR62O43379 1518 aa26.46■■□□□ 1.83
BBS4-206ENST00000563600 URB2Q14146 1524 aaKnown RBP26.39■■□□□ 1.82
BBS4-206ENST00000563600 TOPBP1Q92547 1522 aa26.21■■□□□ 1.79
BBS4-206ENST00000563600 DNMBPQ6XZF7 1577 aa26.16■■□□□ 1.78
BBS4-206ENST00000563600 ABCC8Q09428 1581 aa26.12■■□□□ 1.77
BBS4-206ENST00000563600 IFT140Q96RY7 1462 aa26.03■■□□□ 1.76
BBS4-206ENST00000563600 CUX1P39880 1505 aa26.03■■□□□ 1.76
BBS4-206ENST00000563600 POLA1P09884 1462 aaPredicted RBP25.99■■□□□ 1.75
BBS4-206ENST00000563600 ZNF608Q9ULD9 1512 aaPredicted RBP25.98■■□□□ 1.75
BBS4-206ENST00000563600 DNAJC5Q9H3Z4 198 aa25.95■■□□□ 1.74
BBS4-206ENST00000563600 FGD5Q6ZNL6 1462 aa25.94■■□□□ 1.74
BBS4-206ENST00000563600 RAD54L2Q9Y4B4 1467 aa25.93■■□□□ 1.74
BBS4-206ENST00000563600 TARBP1Q13395 1621 aaKnown RBP25.91■■□□□ 1.74
BBS4-206ENST00000563600 SOGA1O94964 1423 aa25.89■■□□□ 1.74
BBS4-206ENST00000563600 EIF4G3O43432 1585 aaKnown RBP25.85■■□□□ 1.73
BBS4-206ENST00000563600 AQRO60306 1485 aaKnown RBP eCLIP25.84■■□□□ 1.736e-6■■■■□ 21
BBS4-206ENST00000563600 WRNQ14191 1432 aaPredicted RBP eCLIP25.83■■□□□ 1.73
BBS4-206ENST00000563600 TDRD9Q8NDG6 1382 aaKnown RBP25.8■■□□□ 1.72
BBS4-206ENST00000563600 SYNJ1O43426 1573 aa25.79■■□□□ 1.72
BBS4-206ENST00000563600 TOP2BQ02880 1626 aa25.74■■□□□ 1.71
BBS4-206ENST00000563600 BIVM-ERCC5R4GMW8 1640 aa25.73■■□□□ 1.71
BBS4-206ENST00000563600 WDR97A6NE52 1622 aa25.67■■□□□ 1.7
BBS4-206ENST00000563600 ABCA10Q8WWZ4 1543 aa25.63■■□□□ 1.69
BBS4-206ENST00000563600 OSCARQ8IYS5 282 aa25.62■■□□□ 1.69
BBS4-206ENST00000563600 FBLN2P98095 1184 aa25.59■■□□□ 1.69
BBS4-206ENST00000563600 GAPVD1Q14C86 1478 aa25.59■■□□□ 1.69
BBS4-206ENST00000563600 SNAPC4Q5SXM2 1469 aa25.59■■□□□ 1.69
BBS4-206ENST00000563600 GRIN2BQ13224 1484 aa25.57■■□□□ 1.68
BBS4-206ENST00000563600 ABCA5Q8WWZ7 1642 aa25.55■■□□□ 1.68
BBS4-206ENST00000563600 CHD1O14646 1710 aa25.53■■□□□ 1.68
BBS4-206ENST00000563600 PBRM1Q86U86 1689 aa25.52■■□□□ 1.68
BBS4-206ENST00000563600 MAGI1Q96QZ7 1491 aaPredicted RBP25.48■■□□□ 1.67
BBS4-206ENST00000563600 CHMP7Q8WUX9 453 aaPredicted RBP25.45■■□□□ 1.66
BBS4-206ENST00000563600 SYNJ2O15056 1496 aa25.4■■□□□ 1.66
BBS4-206ENST00000563600 ADAMTS12P58397 1594 aa25.33■■□□□ 1.65
BBS4-206ENST00000563600 ERICH3Q5RHP9 1530 aa25.31■■□□□ 1.64
BBS4-206ENST00000563600 KIF27Q86VH2 1401 aa25.28■■□□□ 1.64
BBS4-206ENST00000563600 FHAD1B1AJZ9 1412 aa25.27■■□□□ 1.64
BBS4-206ENST00000563600 GRIN2AQ12879 1464 aa25.25■■□□□ 1.63
BBS4-206ENST00000563600 TRIM41Q8WV44 630 aa25.24■■□□□ 1.63
BBS4-206ENST00000563600 RIMBP3CA6NJZ7 1639 aa25.23■■□□□ 1.63
BBS4-206ENST00000563600 RIMBP3BA6NNM3 1639 aa25.23■■□□□ 1.63
BBS4-206ENST00000563600 RIMBP3Q9UFD9 1639 aa25.23■■□□□ 1.63
BBS4-206ENST00000563600 CLASP1Q7Z460 1538 aa25.22■■□□□ 1.63
BBS4-206ENST00000563600 ARHGEF11O15085 1522 aa25.22■■□□□ 1.63
BBS4-206ENST00000563600 IGF1RP08069 1367 aa25.18■■□□□ 1.62
BBS4-206ENST00000563600 CEP170Q5SW79 1584 aa25.15■■□□□ 1.62
BBS4-206ENST00000563600 RUSC2Q8N2Y8 1516 aa25.12■■□□□ 1.61
BBS4-206ENST00000563600 NUP160Q12769 1436 aa25.12■■□□□ 1.61
BBS4-206ENST00000563600 CUL7Q14999 1698 aa25.08■■□□□ 1.61
BBS4-206ENST00000563600 CYB5RLQ6IPT4 315 aa25.05■■□□□ 1.6
BBS4-206ENST00000563600 CARMIL1Q5VZK9 1371 aa25.05■■□□□ 1.6
BBS4-206ENST00000563600 ARAP1Q96P48 1450 aa25.03■■□□□ 1.6
BBS4-206ENST00000563600 ERCC6L2Q5T890 1561 aa24.96■■□□□ 1.59
BBS4-206ENST00000563600 SHROOM2Q13796 1616 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms