RNA–Protein interactions for RNA: ENST00000563596.5

MAN2C1-215, Transcript of mannosidase alpha class 2C member 1, human

TSL 3

Gene MAN2C1, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MAN2C1-215	ENST00000563596	NISCH	Q9Y2I1	1504 aa		26.04	■■□□□ 1.76
MAN2C1-215	ENST00000563596	CCDC180	Q9P1Z9	1646 aa		23.23	■■□□□ 1.31
MAN2C1-215	ENST00000563596	ABCC9	O60706	1549 aa		22.66	■■□□□ 1.22
MAN2C1-215	ENST00000563596	RB1CC1	Q8TDY2	1594 aa		21.84	■■□□□ 1.09
MAN2C1-215	ENST00000563596	NACAD	O15069	1562 aa		21.81	■■□□□ 1.08
MAN2C1-215	ENST00000563596	DCAF8L2	P0C7V8	631 aa		21.73	■■□□□ 1.07
MAN2C1-215	ENST00000563596	ZCCHC6	Q5VYS8	1495 aa	Known RBP	21.7	■■□□□ 1.06
MAN2C1-215	ENST00000563596	MYO15B	Q96JP2	1530 aa		21.66	■■□□□ 1.06
MAN2C1-215	ENST00000563596	DCAF1	Q9Y4B6	1507 aa		21.57	■■□□□ 1.04
MAN2C1-215	ENST00000563596	UNC13A	Q9UPW8	1703 aa		21.38	■■□□□ 1.01
MAN2C1-215	ENST00000563596	SCRIB	Q14160	1630 aa		21.15	■□□□□ 0.98
MAN2C1-215	ENST00000563596	BICRA	Q9NZM4	1560 aa		21.14	■□□□□ 0.98
MAN2C1-215	ENST00000563596	PABPN1	Q86U42	306 aa	Known RBP eCLIP	21.12	■□□□□ 0.97
MAN2C1-215	ENST00000563596	SHROOM4	Q9ULL8	1493 aa		20.96	■□□□□ 0.95
MAN2C1-215	ENST00000563596	DNAJC5B	Q9UF47	199 aa		20.73	■□□□□ 0.91
MAN2C1-215	ENST00000563596	EIF4G1	Q04637	1599 aa	Known RBP	20.61	■□□□□ 0.89
MAN2C1-215	ENST00000563596	CC2D2A	Q9P2K1	1620 aa		20.53	■□□□□ 0.88
MAN2C1-215	ENST00000563596	CECR2	Q9BXF3	1484 aa		20.37	■□□□□ 0.85
MAN2C1-215	ENST00000563596	SMARCA4	P51532	1647 aa		20.24	■□□□□ 0.83
MAN2C1-215	ENST00000563596	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	20.21	■□□□□ 0.83
MAN2C1-215	ENST00000563596	SMARCA2	P51531	1590 aa		20.11	■□□□□ 0.81
MAN2C1-215	ENST00000563596	NCAPD3	P42695	1498 aa		20.09	■□□□□ 0.81
MAN2C1-215	ENST00000563596	ATAD2B	Q9ULI0	1458 aa		20.09	■□□□□ 0.81
MAN2C1-215	ENST00000563596	MROH2B	Q7Z745	1585 aa		20.06	■□□□□ 0.8
MAN2C1-215	ENST00000563596	PEG3	Q9GZU2	1588 aa		20.04	■□□□□ 0.8
MAN2C1-215	ENST00000563596	HMGXB3	Q12766	1538 aa		20.02	■□□□□ 0.8
MAN2C1-215	ENST00000563596	BAZ1B	Q9UIG0	1483 aa	Known RBP	19.95	■□□□□ 0.78
MAN2C1-215	ENST00000563596	WIZ	O95785	1651 aa		19.87	■□□□□ 0.77
MAN2C1-215	ENST00000563596	RSF1	Q96T23	1441 aa	Predicted RBP	19.81	■□□□□ 0.76
MAN2C1-215	ENST00000563596	TOP2A	P11388	1531 aa	Known RBP	19.66	■□□□□ 0.74
MAN2C1-215	ENST00000563596	LAMC3	Q9Y6N6	1575 aa		19.61	■□□□□ 0.73
MAN2C1-215	ENST00000563596	NES	P48681	1621 aa		19.59	■□□□□ 0.73
MAN2C1-215	ENST00000563596	ERCC6	Q03468	1493 aa		19.55	■□□□□ 0.72
MAN2C1-215	ENST00000563596	CADPS	Q9ULU8	1353 aa		19.49	■□□□□ 0.71
MAN2C1-215	ENST00000563596	PDS5B	Q9NTI5	1447 aa		19.44	■□□□□ 0.7
MAN2C1-215	ENST00000563596	KIF21A	Q7Z4S6	1674 aa		19.43	■□□□□ 0.7
MAN2C1-215	ENST00000563596	CCDC88B	A6NC98	1476 aa		19.4	■□□□□ 0.7
MAN2C1-215	ENST00000563596	CFTR	P13569	1480 aa		19.39	■□□□□ 0.69
MAN2C1-215	ENST00000563596	CUX2	O14529	1486 aa		19.36	■□□□□ 0.69
MAN2C1-215	ENST00000563596	THOC2	Q8NI27	1593 aa	Known RBP	19.36	■□□□□ 0.69
MAN2C1-215	ENST00000563596	PRDM2	Q13029	1718 aa		19.34	■□□□□ 0.69
MAN2C1-215	ENST00000563596	SUPT5H	O00267	1087 aa	Known RBP	19.29	■□□□□ 0.68
MAN2C1-215	ENST00000563596	FANCD2	Q9BXW9	1451 aa		19.28	■□□□□ 0.68
MAN2C1-215	ENST00000563596	CEP164	Q9UPV0	1460 aa		19.28	■□□□□ 0.68
MAN2C1-215	ENST00000563596	MRC2	Q9UBG0	1479 aa		19.24	■□□□□ 0.67
MAN2C1-215	ENST00000563596	WDR62	O43379	1518 aa		19.2	■□□□□ 0.66
MAN2C1-215	ENST00000563596	URB2	Q14146	1524 aa	Known RBP	19.08	■□□□□ 0.64
MAN2C1-215	ENST00000563596	ABCC8	Q09428	1581 aa		19.01	■□□□□ 0.63
MAN2C1-215	ENST00000563596	DNMBP	Q6XZF7	1577 aa		18.98	■□□□□ 0.63
MAN2C1-215	ENST00000563596	TOPBP1	Q92547	1522 aa		18.98	■□□□□ 0.63
MAN2C1-215	ENST00000563596	IFT140	Q96RY7	1462 aa		18.86	■□□□□ 0.61
MAN2C1-215	ENST00000563596	CUX1	P39880	1505 aa		18.82	■□□□□ 0.6
MAN2C1-215	ENST00000563596	POLA1	P09884	1462 aa	Predicted RBP	18.81	■□□□□ 0.6
MAN2C1-215	ENST00000563596	TARBP1	Q13395	1621 aa	Known RBP	18.78	■□□□□ 0.6
MAN2C1-215	ENST00000563596	FGD5	Q6ZNL6	1462 aa		18.77	■□□□□ 0.59
MAN2C1-215	ENST00000563596	ZNF608	Q9ULD9	1512 aa	Predicted RBP	18.75	■□□□□ 0.59
MAN2C1-215	ENST00000563596	EIF4G3	O43432	1585 aa	Known RBP	18.74	■□□□□ 0.59
MAN2C1-215	ENST00000563596	SOGA1	O94964	1423 aa		18.73	■□□□□ 0.59
MAN2C1-215	ENST00000563596	BIVM-ERCC5	R4GMW8	1640 aa		18.71	■□□□□ 0.59
MAN2C1-215	ENST00000563596	DNAJC5	Q9H3Z4	198 aa		18.71	■□□□□ 0.59
MAN2C1-215	ENST00000563596	RAD54L2	Q9Y4B4	1467 aa		18.71	■□□□□ 0.59
MAN2C1-215	ENST00000563596	WRN	Q14191	1432 aa	Predicted RBP eCLIP	18.7	■□□□□ 0.58
MAN2C1-215	ENST00000563596	TOP2B	Q02880	1626 aa		18.69	■□□□□ 0.58
MAN2C1-215	ENST00000563596	WDR97	A6NE52	1622 aa		18.68	■□□□□ 0.58
MAN2C1-215	ENST00000563596	SYNJ1	O43426	1573 aa		18.67	■□□□□ 0.58
MAN2C1-215	ENST00000563596	AQR	O60306	1485 aa	Known RBP eCLIP	18.64	■□□□□ 0.57
MAN2C1-215	ENST00000563596	TDRD9	Q8NDG6	1382 aa	Known RBP	18.6	■□□□□ 0.57
MAN2C1-215	ENST00000563596	ABCA10	Q8WWZ4	1543 aa		18.59	■□□□□ 0.57
MAN2C1-215	ENST00000563596	PBRM1	Q86U86	1689 aa		18.55	■□□□□ 0.56
MAN2C1-215	ENST00000563596	ABCA5	Q8WWZ7	1642 aa		18.54	■□□□□ 0.56
MAN2C1-215	ENST00000563596	GRIN2B	Q13224	1484 aa		18.52	■□□□□ 0.56
MAN2C1-215	ENST00000563596	GAPVD1	Q14C86	1478 aa		18.52	■□□□□ 0.56
MAN2C1-215	ENST00000563596	CHD1	O14646	1710 aa		18.52	■□□□□ 0.56
MAN2C1-215	ENST00000563596	OSCAR	Q8IYS5	282 aa		18.52	■□□□□ 0.56
MAN2C1-215	ENST00000563596	SNAPC4	Q5SXM2	1469 aa		18.5	■□□□□ 0.55
MAN2C1-215	ENST00000563596	MAGI1	Q96QZ7	1491 aa	Predicted RBP	18.49	■□□□□ 0.55
MAN2C1-215	ENST00000563596	FBLN2	P98095	1184 aa		18.42	■□□□□ 0.54
MAN2C1-215	ENST00000563596	SYNJ2	O15056	1496 aa		18.41	■□□□□ 0.54
MAN2C1-215	ENST00000563596	ERICH3	Q5RHP9	1530 aa		18.39	■□□□□ 0.53
MAN2C1-215	ENST00000563596	CHMP7	Q8WUX9	453 aa	Predicted RBP	18.38	■□□□□ 0.53
MAN2C1-215	ENST00000563596	ADAMTS12	P58397	1594 aa		18.36	■□□□□ 0.53
MAN2C1-215	ENST00000563596	KIF27	Q86VH2	1401 aa		18.32	■□□□□ 0.52
MAN2C1-215	ENST00000563596	FHAD1	B1AJZ9	1412 aa		18.31	■□□□□ 0.52
MAN2C1-215	ENST00000563596	GRIN2A	Q12879	1464 aa		18.29	■□□□□ 0.52
MAN2C1-215	ENST00000563596	CLASP1	Q7Z460	1538 aa		18.28	■□□□□ 0.52
MAN2C1-215	ENST00000563596	RIMBP3C	A6NJZ7	1639 aa		18.27	■□□□□ 0.51
MAN2C1-215	ENST00000563596	RIMBP3B	A6NNM3	1639 aa		18.27	■□□□□ 0.51
MAN2C1-215	ENST00000563596	RIMBP3	Q9UFD9	1639 aa		18.27	■□□□□ 0.51
MAN2C1-215	ENST00000563596	CUL7	Q14999	1698 aa		18.25	■□□□□ 0.51
MAN2C1-215	ENST00000563596	ARHGEF11	O15085	1522 aa		18.24	■□□□□ 0.51
MAN2C1-215	ENST00000563596	TRIM41	Q8WV44	630 aa		18.24	■□□□□ 0.51
MAN2C1-215	ENST00000563596	IGF1R	P08069	1367 aa		18.2	■□□□□ 0.5
MAN2C1-215	ENST00000563596	CEP170	Q5SW79	1584 aa		18.2	■□□□□ 0.5
MAN2C1-215	ENST00000563596	NUP160	Q12769	1436 aa		18.19	■□□□□ 0.5
MAN2C1-215	ENST00000563596	CARMIL1	Q5VZK9	1371 aa		18.12	■□□□□ 0.49
MAN2C1-215	ENST00000563596	RUSC2	Q8N2Y8	1516 aa		18.11	■□□□□ 0.49
MAN2C1-215	ENST00000563596	SHROOM2	Q13796	1616 aa		18.09	■□□□□ 0.49
MAN2C1-215	ENST00000563596	ARAP1	Q96P48	1450 aa		18.08	■□□□□ 0.49
MAN2C1-215	ENST00000563596	CYB5RL	Q6IPT4	315 aa		18.04	■□□□□ 0.48
MAN2C1-215	ENST00000563596	RAPGEF2	Q9Y4G8	1499 aa		18.03	■□□□□ 0.48

Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms