RNA–Protein interactions for RNA: ENST00000563530.1

ZFYVE19-208, Transcript of zinc finger FYVE-type containing 19, humanhuman

TSL 4

Gene ZFYVE19, Length 382 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE19-208ENST00000563530 NISCHQ9Y2I1 1504 aa47.34■■■■■ 5.17
ZFYVE19-208ENST00000563530 ABCC9O60706 1549 aa42.71■■■■■ 4.43
ZFYVE19-208ENST00000563530 CCDC180Q9P1Z9 1646 aa42.49■■■■■ 4.39
ZFYVE19-208ENST00000563530 RB1CC1Q8TDY2 1594 aa40.54■■■■■ 4.08
ZFYVE19-208ENST00000563530 DNAJC5BQ9UF47 199 aa40.27■■■■■ 4.04
ZFYVE19-208ENST00000563530 NACADO15069 1562 aa40.23■■■■■ 4.03
ZFYVE19-208ENST00000563530 DCAF8L2P0C7V8 631 aa40.02■■■■■ 4
ZFYVE19-208ENST00000563530 PABPN1Q86U42 306 aaKnown RBP eCLIP39.77■■■■□ 3.96
ZFYVE19-208ENST00000563530 MYO15BQ96JP2 1530 aa39.65■■■■□ 3.94
ZFYVE19-208ENST00000563530 UNC13AQ9UPW8 1703 aa39.61■■■■□ 3.93
ZFYVE19-208ENST00000563530 BICRAQ9NZM4 1560 aa39.42■■■■□ 3.9
ZFYVE19-208ENST00000563530 ZCCHC6Q5VYS8 1495 aaKnown RBP39.21■■■■□ 3.87
ZFYVE19-208ENST00000563530 DCAF1Q9Y4B6 1507 aa39.08■■■■□ 3.85
ZFYVE19-208ENST00000563530 SHROOM4Q9ULL8 1493 aa38.82■■■■□ 3.81
ZFYVE19-208ENST00000563530 SCRIBQ14160 1630 aa38.74■■■■□ 3.79
ZFYVE19-208ENST00000563530 CC2D2AQ9P2K1 1620 aa38.56■■■■□ 3.76
ZFYVE19-208ENST00000563530 CECR2Q9BXF3 1484 aa38.48■■■■□ 3.75
ZFYVE19-208ENST00000563530 EIF4G1Q04637 1599 aaKnown RBP38.44■■■■□ 3.74
ZFYVE19-208ENST00000563530 NCAPD3P42695 1498 aa37.18■■■■□ 3.54
ZFYVE19-208ENST00000563530 ATAD2BQ9ULI0 1458 aa37.05■■■■□ 3.52
ZFYVE19-208ENST00000563530 DNAJC5Q9H3Z4 198 aa37.04■■■■□ 3.52
ZFYVE19-208ENST00000563530 SMARCA4P51532 1647 aa36.95■■■■□ 3.51
ZFYVE19-208ENST00000563530 SMARCA2P51531 1590 aa36.9■■■■□ 3.5
ZFYVE19-208ENST00000563530 HMGXB3Q12766 1538 aa36.87■■■■□ 3.49
ZFYVE19-208ENST00000563530 CUX2O14529 1486 aa36.86■■■■□ 3.49
ZFYVE19-208ENST00000563530 ERCC6Q03468 1493 aa36.86■■■■□ 3.49
ZFYVE19-208ENST00000563530 BAZ1AQ9NRL2 1556 aaPredicted RBP36.74■■■■□ 3.47
ZFYVE19-208ENST00000563530 BAZ1BQ9UIG0 1483 aaKnown RBP36.66■■■■□ 3.46
ZFYVE19-208ENST00000563530 NESP48681 1621 aa36.66■■■■□ 3.46
ZFYVE19-208ENST00000563530 PEG3Q9GZU2 1588 aa36.6■■■■□ 3.45
ZFYVE19-208ENST00000563530 MROH2BQ7Z745 1585 aa36.49■■■■□ 3.43
ZFYVE19-208ENST00000563530 LAMC3Q9Y6N6 1575 aa36.33■■■■□ 3.41
ZFYVE19-208ENST00000563530 THOC2Q8NI27 1593 aaKnown RBP36.3■■■■□ 3.4
ZFYVE19-208ENST00000563530 PDS5BQ9NTI5 1447 aa36.14■■■■□ 3.38
ZFYVE19-208ENST00000563530 KIF21AQ7Z4S6 1674 aa36.13■■■■□ 3.37
ZFYVE19-208ENST00000563530 CADPSQ9ULU8 1353 aa36.04■■■■□ 3.36
ZFYVE19-208ENST00000563530 WIZO95785 1651 aa36.02■■■■□ 3.36
ZFYVE19-208ENST00000563530 MRC2Q9UBG0 1479 aa35.85■■■■□ 3.33
ZFYVE19-208ENST00000563530 WDR62O43379 1518 aa35.77■■■■□ 3.32
ZFYVE19-208ENST00000563530 RSF1Q96T23 1441 aaPredicted RBP35.68■■■■□ 3.3
ZFYVE19-208ENST00000563530 CEP164Q9UPV0 1460 aa35.67■■■■□ 3.3
ZFYVE19-208ENST00000563530 FANCD2Q9BXW9 1451 aa35.63■■■■□ 3.29
ZFYVE19-208ENST00000563530 CFTRP13569 1480 aa35.6■■■■□ 3.29
ZFYVE19-208ENST00000563530 TOP2AP11388 1531 aaKnown RBP35.55■■■■□ 3.28
ZFYVE19-208ENST00000563530 URB2Q14146 1524 aaKnown RBP35.36■■■■□ 3.25
ZFYVE19-208ENST00000563530 TRIM41Q8WV44 630 aa35.35■■■■□ 3.25
ZFYVE19-208ENST00000563530 PRDM2Q13029 1718 aa35.29■■■■□ 3.24
ZFYVE19-208ENST00000563530 CCDC88BA6NC98 1476 aa35.18■■■■□ 3.22
ZFYVE19-208ENST00000563530 OSCARQ8IYS5 282 aa35.15■■■■□ 3.22
ZFYVE19-208ENST00000563530 IFT140Q96RY7 1462 aa34.97■■■■□ 3.19
ZFYVE19-208ENST00000563530 ZNF608Q9ULD9 1512 aaPredicted RBP34.96■■■■□ 3.19
ZFYVE19-208ENST00000563530 TOPBP1Q92547 1522 aa34.94■■■■□ 3.18
ZFYVE19-208ENST00000563530 ABCC8Q09428 1581 aa34.81■■■■□ 3.16
ZFYVE19-208ENST00000563530 DNMBPQ6XZF7 1577 aa34.78■■■■□ 3.16
ZFYVE19-208ENST00000563530 EIF4G3O43432 1585 aaKnown RBP34.71■■■■□ 3.15
ZFYVE19-208ENST00000563530 RIMBP3CA6NJZ7 1639 aa34.7■■■■□ 3.15
ZFYVE19-208ENST00000563530 RIMBP3BA6NNM3 1639 aa34.7■■■■□ 3.15
ZFYVE19-208ENST00000563530 RIMBP3Q9UFD9 1639 aa34.7■■■■□ 3.15
ZFYVE19-208ENST00000563530 TARBP1Q13395 1621 aaKnown RBP34.63■■■■□ 3.13
ZFYVE19-208ENST00000563530 AQRO60306 1485 aaKnown RBP eCLIP34.62■■■■□ 3.13
ZFYVE19-208ENST00000563530 ARHGEF11O15085 1522 aa34.6■■■■□ 3.13
ZFYVE19-208ENST00000563530 POLA1P09884 1462 aaPredicted RBP34.58■■■■□ 3.13
ZFYVE19-208ENST00000563530 RAD54L2Q9Y4B4 1467 aa34.47■■■■□ 3.11
ZFYVE19-208ENST00000563530 CHD1O14646 1710 aa34.46■■■■□ 3.11
ZFYVE19-208ENST00000563530 SOGA1O94964 1423 aa34.41■■■■□ 3.1
ZFYVE19-208ENST00000563530 FBLN2P98095 1184 aa34.4■■■■□ 3.1
ZFYVE19-208ENST00000563530 TDRD9Q8NDG6 1382 aaKnown RBP34.37■■■■□ 3.09
ZFYVE19-208ENST00000563530 CYB5RLQ6IPT4 315 aa34.36■■■■□ 3.09
ZFYVE19-208ENST00000563530 FGD5Q6ZNL6 1462 aa34.33■■■■□ 3.09
ZFYVE19-208ENST00000563530 CUX1P39880 1505 aa34.29■■■■□ 3.08
ZFYVE19-208ENST00000563530 WDR97A6NE52 1622 aa34.27■■■■□ 3.08
ZFYVE19-208ENST00000563530 ARAP1Q96P48 1450 aa34.26■■■■□ 3.07
ZFYVE19-208ENST00000563530 SNAPC4Q5SXM2 1469 aa34.25■■■■□ 3.07
ZFYVE19-208ENST00000563530 MAGI1Q96QZ7 1491 aaPredicted RBP34.13■■■■□ 3.05
ZFYVE19-208ENST00000563530 CHMP7Q8WUX9 453 aaPredicted RBP34.12■■■■□ 3.05
ZFYVE19-208ENST00000563530 GRIN2BQ13224 1484 aa34.12■■■■□ 3.05
ZFYVE19-208ENST00000563530 CLASP1Q7Z460 1538 aa34.11■■■■□ 3.05
ZFYVE19-208ENST00000563530 SYNJ1O43426 1573 aa34.04■■■■□ 3.04
ZFYVE19-208ENST00000563530 SYNJ2O15056 1496 aa34.02■■■■□ 3.04
ZFYVE19-208ENST00000563530 TRHP20396 242 aaPredicted RBP34.01■■■■□ 3.03
ZFYVE19-208ENST00000563530 GAPVD1Q14C86 1478 aa33.98■■■■□ 3.03
ZFYVE19-208ENST00000563530 SUPT5HO00267 1087 aaKnown RBP33.97■■■■□ 3.03
ZFYVE19-208ENST00000563530 ABCA10Q8WWZ4 1543 aa33.94■■■■□ 3.02
ZFYVE19-208ENST00000563530 PBRM1Q86U86 1689 aa33.93■■■■□ 3.02
ZFYVE19-208ENST00000563530 ABCA5Q8WWZ7 1642 aa33.88■■■■□ 3.01
ZFYVE19-208ENST00000563530 WRNQ14191 1432 aaPredicted RBP eCLIP33.75■■■□□ 2.99
ZFYVE19-208ENST00000563530 GRIN2AQ12879 1464 aa33.69■■■□□ 2.98
ZFYVE19-208ENST00000563530 TOP2BQ02880 1626 aa33.66■■■□□ 2.98
ZFYVE19-208ENST00000563530 BIVM-ERCC5R4GMW8 1640 aa33.66■■■□□ 2.98
ZFYVE19-208ENST00000563530 ADAMTS12P58397 1594 aa33.64■■■□□ 2.98
ZFYVE19-208ENST00000563530 NUP160Q12769 1436 aa33.6■■■□□ 2.97
ZFYVE19-208ENST00000563530 ERCC6L2Q5T890 1561 aa33.59■■■□□ 2.97
ZFYVE19-208ENST00000563530 CEP170Q5SW79 1584 aa33.58■■■□□ 2.97
ZFYVE19-208ENST00000563530 FHAD1B1AJZ9 1412 aa33.54■■■□□ 2.96
ZFYVE19-208ENST00000563530 ERICH3Q5RHP9 1530 aa33.48■■■□□ 2.95
ZFYVE19-208ENST00000563530 SHROOM2Q13796 1616 aa33.44■■■□□ 2.94
ZFYVE19-208ENST00000563530 PRG4Q92954 1404 aaPredicted RBP33.28■■■□□ 2.92
ZFYVE19-208ENST00000563530 JPH4Q96JJ6 628 aa33.25■■■□□ 2.91
ZFYVE19-208ENST00000563530 RUSC2Q8N2Y8 1516 aa33.17■■■□□ 2.9
ZFYVE19-208ENST00000563530 AEBP2Q6ZN18 517 aaPredicted RBP33.13■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms