RNA–Protein interactions for RNA: ENST00000563346.1

TSC2-219, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-219ENST00000563346 NISCHQ9Y2I1 1504 aa43.07■■■■■ 4.49
TSC2-219ENST00000563346 CCDC180Q9P1Z9 1646 aa38.62■■■■□ 3.77
TSC2-219ENST00000563346 ABCC9O60706 1549 aa38.51■■■■□ 3.76
TSC2-219ENST00000563346 RB1CC1Q8TDY2 1594 aa36.72■■■■□ 3.47
TSC2-219ENST00000563346 DNAJC5BQ9UF47 199 aa36.52■■■■□ 3.44
TSC2-219ENST00000563346 NACADO15069 1562 aa36.48■■■■□ 3.43
TSC2-219ENST00000563346 DCAF8L2P0C7V8 631 aa36.4■■■■□ 3.42
TSC2-219ENST00000563346 MYO15BQ96JP2 1530 aa35.98■■■■□ 3.35
TSC2-219ENST00000563346 PABPN1Q86U42 306 aaKnown RBP eCLIP35.88■■■■□ 3.33
TSC2-219ENST00000563346 UNC13AQ9UPW8 1703 aa35.86■■■■□ 3.33
TSC2-219ENST00000563346 ZCCHC6Q5VYS8 1495 aaKnown RBP35.71■■■■□ 3.31
TSC2-219ENST00000563346 BICRAQ9NZM4 1560 aa35.58■■■■□ 3.29
TSC2-219ENST00000563346 DCAF1Q9Y4B6 1507 aa35.57■■■■□ 3.29
TSC2-219ENST00000563346 SCRIBQ14160 1630 aa35.21■■■■□ 3.23
TSC2-219ENST00000563346 SHROOM4Q9ULL8 1493 aa35.14■■■■□ 3.22
TSC2-219ENST00000563346 CC2D2AQ9P2K1 1620 aa34.78■■■■□ 3.16
TSC2-219ENST00000563346 EIF4G1Q04637 1599 aaKnown RBP34.74■■■■□ 3.15
TSC2-219ENST00000563346 CECR2Q9BXF3 1484 aa34.67■■■■□ 3.14
TSC2-219ENST00000563346 DNAJC5Q9H3Z4 198 aa33.78■■■■□ 3
TSC2-219ENST00000563346 NCAPD3P42695 1498 aa33.65■■■□□ 2.98
TSC2-219ENST00000563346 SMARCA4P51532 1647 aa33.58■■■□□ 2.97
TSC2-219ENST00000563346 ATAD2BQ9ULI0 1458 aa33.57■■■□□ 2.97
TSC2-219ENST00000563346 SMARCA2P51531 1590 aa33.51■■■□□ 2.96
TSC2-219ENST00000563346 BAZ1AQ9NRL2 1556 aaPredicted RBP33.45■■■□□ 2.95
TSC2-219ENST00000563346 HMGXB3Q12766 1538 aa33.43■■■□□ 2.94
TSC2-219ENST00000563346 BAZ1BQ9UIG0 1483 aaKnown RBP33.3■■■□□ 2.92
TSC2-219ENST00000563346 ERCC6Q03468 1493 aa33.28■■■□□ 2.92
TSC2-219ENST00000563346 PEG3Q9GZU2 1588 aa33.23■■■□□ 2.91
TSC2-219ENST00000563346 CUX2O14529 1486 aa33.19■■■□□ 2.9
TSC2-219ENST00000563346 MROH2BQ7Z745 1585 aa33.18■■■□□ 2.9
TSC2-219ENST00000563346 NESP48681 1621 aa33.09■■■□□ 2.89
TSC2-219ENST00000563346 LAMC3Q9Y6N6 1575 aa32.91■■■□□ 2.86
TSC2-219ENST00000563346 WIZO95785 1651 aa32.82■■■□□ 2.84
TSC2-219ENST00000563346 PDS5BQ9NTI5 1447 aa32.73■■■□□ 2.83
TSC2-219ENST00000563346 THOC2Q8NI27 1593 aaKnown RBP32.73■■■□□ 2.83
TSC2-219ENST00000563346 KIF21AQ7Z4S6 1674 aa32.69■■■□□ 2.82
TSC2-219ENST00000563346 CADPSQ9ULU8 1353 aa32.65■■■□□ 2.82
TSC2-219ENST00000563346 RSF1Q96T23 1441 aaPredicted RBP32.54■■■□□ 2.8
TSC2-219ENST00000563346 MRC2Q9UBG0 1479 aa32.42■■■□□ 2.78
TSC2-219ENST00000563346 TOP2AP11388 1531 aaKnown RBP32.41■■■□□ 2.78
TSC2-219ENST00000563346 CEP164Q9UPV0 1460 aa32.34■■■□□ 2.77
TSC2-219ENST00000563346 TRIM41Q8WV44 630 aa32.33■■■□□ 2.77
TSC2-219ENST00000563346 WDR62O43379 1518 aa32.32■■■□□ 2.76
TSC2-219ENST00000563346 CFTRP13569 1480 aa32.29■■■□□ 2.76
TSC2-219ENST00000563346 FANCD2Q9BXW9 1451 aa32.29■■■□□ 2.76
TSC2-219ENST00000563346 CCDC88BA6NC98 1476 aa32.03■■■□□ 2.72
TSC2-219ENST00000563346 PRDM2Q13029 1718 aa32.02■■■□□ 2.72
TSC2-219ENST00000563346 URB2Q14146 1524 aaKnown RBP32■■■□□ 2.71
TSC2-219ENST00000563346 TOPBP1Q92547 1522 aa31.69■■■□□ 2.66
TSC2-219ENST00000563346 IFT140Q96RY7 1462 aa31.67■■■□□ 2.66
TSC2-219ENST00000563346 OSCARQ8IYS5 282 aa31.67■■■□□ 2.66
TSC2-219ENST00000563346 ABCC8Q09428 1581 aa31.66■■■□□ 2.66
TSC2-219ENST00000563346 DNMBPQ6XZF7 1577 aa31.6■■■□□ 2.65
TSC2-219ENST00000563346 ZNF608Q9ULD9 1512 aaPredicted RBP31.59■■■□□ 2.65
TSC2-219ENST00000563346 EIF4G3O43432 1585 aaKnown RBP31.44■■■□□ 2.62
TSC2-219ENST00000563346 TARBP1Q13395 1621 aaKnown RBP31.38■■■□□ 2.61
TSC2-219ENST00000563346 RIMBP3CA6NJZ7 1639 aa31.38■■■□□ 2.61
TSC2-219ENST00000563346 RIMBP3BA6NNM3 1639 aa31.38■■■□□ 2.61
TSC2-219ENST00000563346 RIMBP3Q9UFD9 1639 aa31.38■■■□□ 2.61
TSC2-219ENST00000563346 POLA1P09884 1462 aaPredicted RBP31.36■■■□□ 2.61
TSC2-219ENST00000563346 AQRO60306 1485 aaKnown RBP eCLIP31.33■■■□□ 2.61
TSC2-219ENST00000563346 SUPT5HO00267 1087 aaKnown RBP31.27■■■□□ 2.6
TSC2-219ENST00000563346 RAD54L2Q9Y4B4 1467 aa31.26■■■□□ 2.59
TSC2-219ENST00000563346 SOGA1O94964 1423 aa31.25■■■□□ 2.59
TSC2-219ENST00000563346 FGD5Q6ZNL6 1462 aa31.21■■■□□ 2.59
TSC2-219ENST00000563346 ARHGEF11O15085 1522 aa31.19■■■□□ 2.58
TSC2-219ENST00000563346 CHD1O14646 1710 aa31.19■■■□□ 2.58
TSC2-219ENST00000563346 CUX1P39880 1505 aa31.18■■■□□ 2.58
TSC2-219ENST00000563346 FBLN2P98095 1184 aa31.17■■■□□ 2.58
TSC2-219ENST00000563346 TDRD9Q8NDG6 1382 aaKnown RBP31.16■■■□□ 2.58
TSC2-219ENST00000563346 WDR97A6NE52 1622 aa31.09■■■□□ 2.57
TSC2-219ENST00000563346 CYB5RLQ6IPT4 315 aa31.07■■■□□ 2.56
TSC2-219ENST00000563346 SNAPC4Q5SXM2 1469 aa31.02■■■□□ 2.56
TSC2-219ENST00000563346 GRIN2BQ13224 1484 aa30.96■■■□□ 2.55
TSC2-219ENST00000563346 TRHP20396 242 aaPredicted RBP30.95■■■□□ 2.55
TSC2-219ENST00000563346 MAGI1Q96QZ7 1491 aaPredicted RBP30.95■■■□□ 2.54
TSC2-219ENST00000563346 CHMP7Q8WUX9 453 aaPredicted RBP30.94■■■□□ 2.54
TSC2-219ENST00000563346 GAPVD1Q14C86 1478 aa30.88■■■□□ 2.53
TSC2-219ENST00000563346 ARAP1Q96P48 1450 aa30.86■■■□□ 2.53
TSC2-219ENST00000563346 PBRM1Q86U86 1689 aa30.86■■■□□ 2.53
TSC2-219ENST00000563346 SYNJ1O43426 1573 aa30.85■■■□□ 2.53
TSC2-219ENST00000563346 ABCA10Q8WWZ4 1543 aa30.84■■■□□ 2.53
TSC2-219ENST00000563346 SYNJ2O15056 1496 aa30.84■■■□□ 2.53
TSC2-219ENST00000563346 CLASP1Q7Z460 1538 aa30.8■■■□□ 2.52
TSC2-219ENST00000563346 ABCA5Q8WWZ7 1642 aa30.78■■■□□ 2.52
TSC2-219ENST00000563346 WRNQ14191 1432 aaPredicted RBP eCLIP30.77■■■□□ 2.52
TSC2-219ENST00000563346 BIVM-ERCC5R4GMW8 1640 aa30.73■■■□□ 2.51
TSC2-219ENST00000563346 TOP2BQ02880 1626 aa30.72■■■□□ 2.51
TSC2-219ENST00000563346 GRIN2AQ12879 1464 aa30.56■■■□□ 2.48
TSC2-219ENST00000563346 ADAMTS12P58397 1594 aa30.55■■■□□ 2.48
TSC2-219ENST00000563346 FHAD1B1AJZ9 1412 aa30.48■■■□□ 2.47
TSC2-219ENST00000563346 ERICH3Q5RHP9 1530 aa30.47■■■□□ 2.47
TSC2-219ENST00000563346 NUP160Q12769 1436 aa30.43■■■□□ 2.46
TSC2-219ENST00000563346 CEP170Q5SW79 1584 aa30.43■■■□□ 2.46
TSC2-219ENST00000563346 AEBP2Q6ZN18 517 aaPredicted RBP30.37■■■□□ 2.45
TSC2-219ENST00000563346 ERCC6L2Q5T890 1561 aa30.33■■■□□ 2.45
TSC2-219ENST00000563346 SHROOM2Q13796 1616 aa30.28■■■□□ 2.44
TSC2-219ENST00000563346 KIF27Q86VH2 1401 aa30.16■■■□□ 2.42
TSC2-219ENST00000563346 PRG4Q92954 1404 aaPredicted RBP30.16■■■□□ 2.42
TSC2-219ENST00000563346 JPH4Q96JJ6 628 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms