RNA–Protein interactions for RNA: ENST00000563340.1

ATP2C2-204, Transcript of ATPase secretory pathway Ca2+ transporting 2, humanhuman

TSL 3

Gene ATP2C2, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C2-204ENST00000563340 NISCHQ9Y2I1 1504 aa34.24■■■■□ 3.07
ATP2C2-204ENST00000563340 ABCC9O60706 1549 aa31.55■■■□□ 2.64
ATP2C2-204ENST00000563340 CCDC180Q9P1Z9 1646 aa30.87■■■□□ 2.53
ATP2C2-204ENST00000563340 DNAJC5BQ9UF47 199 aa30.2■■■□□ 2.43
ATP2C2-204ENST00000563340 RB1CC1Q8TDY2 1594 aa29.73■■■□□ 2.35
ATP2C2-204ENST00000563340 NACADO15069 1562 aa29.42■■■□□ 2.3
ATP2C2-204ENST00000563340 PABPN1Q86U42 306 aaKnown RBP eCLIP29.35■■■□□ 2.29
ATP2C2-204ENST00000563340 DCAF8L2P0C7V8 631 aa29.23■■■□□ 2.27
ATP2C2-204ENST00000563340 UNC13AQ9UPW8 1703 aa28.91■■■□□ 2.22
ATP2C2-204ENST00000563340 BICRAQ9NZM4 1560 aa28.88■■■□□ 2.21
ATP2C2-204ENST00000563340 MYO15BQ96JP2 1530 aa28.85■■■□□ 2.21
ATP2C2-204ENST00000563340 CECR2Q9BXF3 1484 aa28.51■■■□□ 2.15
ATP2C2-204ENST00000563340 SHROOM4Q9ULL8 1493 aa28.49■■■□□ 2.15
ATP2C2-204ENST00000563340 CC2D2AQ9P2K1 1620 aa28.42■■■□□ 2.14
ATP2C2-204ENST00000563340 DCAF1Q9Y4B6 1507 aa28.25■■■□□ 2.11
ATP2C2-204ENST00000563340 EIF4G1Q04637 1599 aaKnown RBP28.24■■■□□ 2.11
ATP2C2-204ENST00000563340 ZCCHC6Q5VYS8 1495 aaKnown RBP28.23■■■□□ 2.11
ATP2C2-204ENST00000563340 DNAJC5Q9H3Z4 198 aa28.19■■■□□ 2.1
ATP2C2-204ENST00000563340 SCRIBQ14160 1630 aa28.12■■■□□ 2.09
ATP2C2-204ENST00000563340 CUX2O14529 1486 aa27.44■■□□□ 1.98
ATP2C2-204ENST00000563340 ERCC6Q03468 1493 aa27.3■■□□□ 1.96
ATP2C2-204ENST00000563340 NCAPD3P42695 1498 aa27.23■■□□□ 1.95
ATP2C2-204ENST00000563340 ATAD2BQ9ULI0 1458 aa27.04■■□□□ 1.92
ATP2C2-204ENST00000563340 NESP48681 1621 aa26.93■■□□□ 1.9
ATP2C2-204ENST00000563340 HMGXB3Q12766 1538 aa26.9■■□□□ 1.9
ATP2C2-204ENST00000563340 SMARCA2P51531 1590 aa26.88■■□□□ 1.89
ATP2C2-204ENST00000563340 SMARCA4P51532 1647 aa26.77■■□□□ 1.88
ATP2C2-204ENST00000563340 BAZ1BQ9UIG0 1483 aaKnown RBP26.72■■□□□ 1.87
ATP2C2-204ENST00000563340 THOC2Q8NI27 1593 aaKnown RBP26.7■■□□□ 1.86
ATP2C2-204ENST00000563340 TRIM41Q8WV44 630 aa26.67■■□□□ 1.86
ATP2C2-204ENST00000563340 LAMC3Q9Y6N6 1575 aa26.63■■□□□ 1.85
ATP2C2-204ENST00000563340 BAZ1AQ9NRL2 1556 aaPredicted RBP26.6■■□□□ 1.85
ATP2C2-204ENST00000563340 PDS5BQ9NTI5 1447 aa26.57■■□□□ 1.84
ATP2C2-204ENST00000563340 PEG3Q9GZU2 1588 aa26.55■■□□□ 1.84
ATP2C2-204ENST00000563340 KIF21AQ7Z4S6 1674 aa26.44■■□□□ 1.82
ATP2C2-204ENST00000563340 CADPSQ9ULU8 1353 aa26.38■■□□□ 1.81
ATP2C2-204ENST00000563340 MROH2BQ7Z745 1585 aa26.37■■□□□ 1.81
ATP2C2-204ENST00000563340 MRC2Q9UBG0 1479 aa26.33■■□□□ 1.81
ATP2C2-204ENST00000563340 WDR62O43379 1518 aa26.26■■□□□ 1.79
ATP2C2-204ENST00000563340 OSCARQ8IYS5 282 aa26.18■■□□□ 1.78
ATP2C2-204ENST00000563340 CEP164Q9UPV0 1460 aa26.1■■□□□ 1.77
ATP2C2-204ENST00000563340 FANCD2Q9BXW9 1451 aa26.04■■□□□ 1.76
ATP2C2-204ENST00000563340 WIZO95785 1651 aa25.95■■□□□ 1.74
ATP2C2-204ENST00000563340 CFTRP13569 1480 aa25.93■■□□□ 1.74
ATP2C2-204ENST00000563340 URB2Q14146 1524 aaKnown RBP25.84■■□□□ 1.73
ATP2C2-204ENST00000563340 RIMBP3CA6NJZ7 1639 aa25.74■■□□□ 1.71
ATP2C2-204ENST00000563340 RIMBP3BA6NNM3 1639 aa25.74■■□□□ 1.71
ATP2C2-204ENST00000563340 RIMBP3Q9UFD9 1639 aa25.74■■□□□ 1.71
ATP2C2-204ENST00000563340 RSF1Q96T23 1441 aaPredicted RBP25.66■■□□□ 1.7
ATP2C2-204ENST00000563340 ARHGEF11O15085 1522 aa25.66■■□□□ 1.7
ATP2C2-204ENST00000563340 ZNF608Q9ULD9 1512 aaPredicted RBP25.63■■□□□ 1.69
ATP2C2-204ENST00000563340 IFT140Q96RY7 1462 aa25.63■■□□□ 1.69
ATP2C2-204ENST00000563340 TOP2AP11388 1531 aaKnown RBP25.63■■□□□ 1.69
ATP2C2-204ENST00000563340 CYB5RLQ6IPT4 315 aa25.6■■□□□ 1.69
ATP2C2-204ENST00000563340 TRHP20396 242 aaPredicted RBP25.49■■□□□ 1.67
ATP2C2-204ENST00000563340 TOPBP1Q92547 1522 aa25.47■■□□□ 1.67
ATP2C2-204ENST00000563340 PRDM2Q13029 1718 aa25.4■■□□□ 1.66
ATP2C2-204ENST00000563340 CCDC88BA6NC98 1476 aa25.4■■□□□ 1.66
ATP2C2-204ENST00000563340 ABCC8Q09428 1581 aa25.39■■□□□ 1.66
ATP2C2-204ENST00000563340 ARAP1Q96P48 1450 aa25.38■■□□□ 1.65
ATP2C2-204ENST00000563340 EIF4G3O43432 1585 aaKnown RBP25.38■■□□□ 1.65
ATP2C2-204ENST00000563340 AQRO60306 1485 aaKnown RBP eCLIP25.35■■□□□ 1.65
ATP2C2-204ENST00000563340 FBLN2P98095 1184 aa25.34■■□□□ 1.65
ATP2C2-204ENST00000563340 DNMBPQ6XZF7 1577 aa25.28■■□□□ 1.64
ATP2C2-204ENST00000563340 CHD1O14646 1710 aa25.24■■□□□ 1.63
ATP2C2-204ENST00000563340 TARBP1Q13395 1621 aaKnown RBP25.23■■□□□ 1.63
ATP2C2-204ENST00000563340 AEBP2Q6ZN18 517 aaPredicted RBP25.18■■□□□ 1.62
ATP2C2-204ENST00000563340 POLA1P09884 1462 aaPredicted RBP25.17■■□□□ 1.62
ATP2C2-204ENST00000563340 TDRD9Q8NDG6 1382 aaKnown RBP25.13■■□□□ 1.61
ATP2C2-204ENST00000563340 RAD54L2Q9Y4B4 1467 aa25.09■■□□□ 1.61
ATP2C2-204ENST00000563340 SOGA1O94964 1423 aa25.09■■□□□ 1.61
ATP2C2-204ENST00000563340 CHMP7Q8WUX9 453 aaPredicted RBP25.07■■□□□ 1.6
ATP2C2-204ENST00000563340 CLASP1Q7Z460 1538 aa25.04■■□□□ 1.6
ATP2C2-204ENST00000563340 SNAPC4Q5SXM2 1469 aa25.03■■□□□ 1.6
ATP2C2-204ENST00000563340 SYNJ1O43426 1573 aa24.97■■□□□ 1.59
ATP2C2-204ENST00000563340 MAGI1Q96QZ7 1491 aaPredicted RBP24.96■■□□□ 1.59
ATP2C2-204ENST00000563340 WDR97A6NE52 1622 aa24.94■■□□□ 1.58
ATP2C2-204ENST00000563340 FGD5Q6ZNL6 1462 aa24.92■■□□□ 1.58
ATP2C2-204ENST00000563340 GRIN2BQ13224 1484 aa24.91■■□□□ 1.58
ATP2C2-204ENST00000563340 SYNJ2O15056 1496 aa24.89■■□□□ 1.58
ATP2C2-204ENST00000563340 GAPVD1Q14C86 1478 aa24.86■■□□□ 1.57
ATP2C2-204ENST00000563340 CUX1P39880 1505 aa24.8■■□□□ 1.56
ATP2C2-204ENST00000563340 ABCA10Q8WWZ4 1543 aa24.62■■□□□ 1.53
ATP2C2-204ENST00000563340 PBRM1Q86U86 1689 aa24.62■■□□□ 1.53
ATP2C2-204ENST00000563340 ERCC6L2Q5T890 1561 aa24.6■■□□□ 1.53
ATP2C2-204ENST00000563340 GRIN2AQ12879 1464 aa24.58■■□□□ 1.52
ATP2C2-204ENST00000563340 ABCA5Q8WWZ7 1642 aa24.56■■□□□ 1.52
ATP2C2-204ENST00000563340 NUP160Q12769 1436 aa24.54■■□□□ 1.52
ATP2C2-204ENST00000563340 CEP170Q5SW79 1584 aa24.52■■□□□ 1.52
ATP2C2-204ENST00000563340 WRNQ14191 1432 aaPredicted RBP eCLIP24.45■■□□□ 1.51
ATP2C2-204ENST00000563340 FHAD1B1AJZ9 1412 aa24.43■■□□□ 1.5
ATP2C2-204ENST00000563340 ADAMTS12P58397 1594 aa24.42■■□□□ 1.5
ATP2C2-204ENST00000563340 SHROOM2Q13796 1616 aa24.42■■□□□ 1.5
ATP2C2-204ENST00000563340 PRG4Q92954 1404 aaPredicted RBP24.36■■□□□ 1.49
ATP2C2-204ENST00000563340 FAM69CQ0P6D2 419 aa24.36■■□□□ 1.49
ATP2C2-204ENST00000563340 JPH4Q96JJ6 628 aa24.35■■□□□ 1.49
ATP2C2-204ENST00000563340 KIF13AQ9H1H9 1805 aa24.35■■□□□ 1.49
ATP2C2-204ENST00000563340 ABCC10Q5T3U5 1492 aa24.31■■□□□ 1.48
ATP2C2-204ENST00000563340 NPM1P06748 294 aaKnown RBP eCLIP24.29■■□□□ 1.48
ATP2C2-204ENST00000563340 ERICH3Q5RHP9 1530 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms