RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 NISCHQ9Y2I1 1504 aa34.63■■■■□ 3.13
CDH11-207ENST00000563255 ABCC9O60706 1549 aa30.83■■■□□ 2.53
CDH11-207ENST00000563255 CCDC180Q9P1Z9 1646 aa30.6■■■□□ 2.49
CDH11-207ENST00000563255 DNAJC5BQ9UF47 199 aa29.23■■■□□ 2.27
CDH11-207ENST00000563255 RB1CC1Q8TDY2 1594 aa29.1■■■□□ 2.25
CDH11-207ENST00000563255 ZCCHC6Q5VYS8 1495 aaKnown RBP28.98■■■□□ 2.23
CDH11-207ENST00000563255 DCAF8L2P0C7V8 631 aa28.94■■■□□ 2.22
CDH11-207ENST00000563255 NACADO15069 1562 aa28.87■■■□□ 2.21
CDH11-207ENST00000563255 DCAF1Q9Y4B6 1507 aa28.74■■■□□ 2.19
CDH11-207ENST00000563255 PABPN1Q86U42 306 aaKnown RBP eCLIP28.66■■■□□ 2.18
CDH11-207ENST00000563255 MYO15BQ96JP2 1530 aa28.6■■■□□ 2.17
CDH11-207ENST00000563255 UNC13AQ9UPW8 1703 aa28.49■■■□□ 2.15
CDH11-207ENST00000563255 BICRAQ9NZM4 1560 aa28.24■■■□□ 2.11
CDH11-207ENST00000563255 SCRIBQ14160 1630 aa27.87■■■□□ 2.05
CDH11-207ENST00000563255 SHROOM4Q9ULL8 1493 aa27.8■■■□□ 2.04
CDH11-207ENST00000563255 CC2D2AQ9P2K1 1620 aa27.76■■■□□ 2.03
CDH11-207ENST00000563255 CECR2Q9BXF3 1484 aa27.72■■■□□ 2.03
CDH11-207ENST00000563255 EIF4G1Q04637 1599 aaKnown RBP27.56■■■□□ 2
CDH11-207ENST00000563255 DNAJC5Q9H3Z4 198 aa27■■□□□ 1.91
CDH11-207ENST00000563255 BAZ1AQ9NRL2 1556 aaPredicted RBP26.81■■□□□ 1.88
CDH11-207ENST00000563255 SMARCA4P51532 1647 aa26.76■■□□□ 1.87
CDH11-207ENST00000563255 NCAPD3P42695 1498 aa26.68■■□□□ 1.86
CDH11-207ENST00000563255 MROH2BQ7Z745 1585 aa26.68■■□□□ 1.86
CDH11-207ENST00000563255 ERCC6Q03468 1493 aa26.61■■□□□ 1.85
CDH11-207ENST00000563255 RSF1Q96T23 1441 aaPredicted RBP26.59■■□□□ 1.85
CDH11-207ENST00000563255 ATAD2BQ9ULI0 1458 aa26.59■■□□□ 1.85
CDH11-207ENST00000563255 CUX2O14529 1486 aa26.54■■□□□ 1.84
CDH11-207ENST00000563255 PEG3Q9GZU2 1588 aa26.51■■□□□ 1.83
CDH11-207ENST00000563255 WIZO95785 1651 aa26.5■■□□□ 1.83
CDH11-207ENST00000563255 SMARCA2P51531 1590 aa26.49■■□□□ 1.83
CDH11-207ENST00000563255 HMGXB3Q12766 1538 aa26.41■■□□□ 1.82
CDH11-207ENST00000563255 NESP48681 1621 aa26.37■■□□□ 1.81
CDH11-207ENST00000563255 SUPT5HO00267 1087 aaKnown RBP26.36■■□□□ 1.81
CDH11-207ENST00000563255 BAZ1BQ9UIG0 1483 aaKnown RBP26.33■■□□□ 1.81
CDH11-207ENST00000563255 TOP2AP11388 1531 aaKnown RBP26.21■■□□□ 1.79
CDH11-207ENST00000563255 THOC2Q8NI27 1593 aaKnown RBP26.11■■□□□ 1.77
CDH11-207ENST00000563255 LAMC3Q9Y6N6 1575 aa26.06■■□□□ 1.76
CDH11-207ENST00000563255 KIF21AQ7Z4S6 1674 aa26.03■■□□□ 1.76
CDH11-207ENST00000563255 PDS5BQ9NTI5 1447 aa25.98■■□□□ 1.75
CDH11-207ENST00000563255 TRIM41Q8WV44 630 aa25.9■■□□□ 1.74
CDH11-207ENST00000563255 CADPSQ9ULU8 1353 aa25.9■■□□□ 1.74
CDH11-207ENST00000563255 CCDC88BA6NC98 1476 aa25.87■■□□□ 1.73
CDH11-207ENST00000563255 MRC2Q9UBG0 1479 aa25.72■■□□□ 1.71
CDH11-207ENST00000563255 WDR62O43379 1518 aa25.63■■□□□ 1.69
CDH11-207ENST00000563255 CEP164Q9UPV0 1460 aa25.61■■□□□ 1.69
CDH11-207ENST00000563255 PRDM2Q13029 1718 aa25.61■■□□□ 1.69
CDH11-207ENST00000563255 FANCD2Q9BXW9 1451 aa25.59■■□□□ 1.69
CDH11-207ENST00000563255 CFTRP13569 1480 aa25.54■■□□□ 1.68
CDH11-207ENST00000563255 URB2Q14146 1524 aaKnown RBP25.37■■□□□ 1.65
CDH11-207ENST00000563255 OSCARQ8IYS5 282 aa25.33■■□□□ 1.65
CDH11-207ENST00000563255 ABCC8Q09428 1581 aa25.14■■□□□ 1.62
CDH11-207ENST00000563255 RIMBP3CA6NJZ7 1639 aa25.13■■□□□ 1.61
CDH11-207ENST00000563255 RIMBP3BA6NNM3 1639 aa25.13■■□□□ 1.61
CDH11-207ENST00000563255 RIMBP3Q9UFD9 1639 aa25.13■■□□□ 1.61
CDH11-207ENST00000563255 IFT140Q96RY7 1462 aa25.11■■□□□ 1.61
CDH11-207ENST00000563255 ZNF608Q9ULD9 1512 aaPredicted RBP25.09■■□□□ 1.61
CDH11-207ENST00000563255 TOPBP1Q92547 1522 aa25.07■■□□□ 1.6
CDH11-207ENST00000563255 WRNQ14191 1432 aaPredicted RBP eCLIP25.06■■□□□ 1.6
CDH11-207ENST00000563255 BIVM-ERCC5R4GMW8 1640 aa25.04■■□□□ 1.6
CDH11-207ENST00000563255 CHIC1Q5VXU3 224 aa25.04■■□□□ 1.6
CDH11-207ENST00000563255 SYNJ1O43426 1573 aa25.01■■□□□ 1.59
CDH11-207ENST00000563255 TOP2BQ02880 1626 aa25.01■■□□□ 1.59
CDH11-207ENST00000563255 CUX1P39880 1505 aa24.99■■□□□ 1.59
CDH11-207ENST00000563255 DNMBPQ6XZF7 1577 aa24.99■■□□□ 1.59
CDH11-207ENST00000563255 ARHGEF11O15085 1522 aa24.96■■□□□ 1.59
CDH11-207ENST00000563255 EIF4G3O43432 1585 aaKnown RBP24.91■■□□□ 1.58
CDH11-207ENST00000563255 AQRO60306 1485 aaKnown RBP eCLIP24.89■■□□□ 1.58
CDH11-207ENST00000563255 CHD1O14646 1710 aa24.86■■□□□ 1.57
CDH11-207ENST00000563255 FBLN2P98095 1184 aa24.85■■□□□ 1.57
CDH11-207ENST00000563255 CYB5RLQ6IPT4 315 aa24.85■■□□□ 1.57
CDH11-207ENST00000563255 TARBP1Q13395 1621 aaKnown RBP24.83■■□□□ 1.56
CDH11-207ENST00000563255 POLA1P09884 1462 aaPredicted RBP24.81■■□□□ 1.56
CDH11-207ENST00000563255 FGD5Q6ZNL6 1462 aa24.79■■□□□ 1.56
CDH11-207ENST00000563255 RAD54L2Q9Y4B4 1467 aa24.77■■□□□ 1.56
CDH11-207ENST00000563255 TRHP20396 242 aaPredicted RBP24.76■■□□□ 1.55
CDH11-207ENST00000563255 SOGA1O94964 1423 aa24.76■■□□□ 1.55
CDH11-207ENST00000563255 TDRD9Q8NDG6 1382 aaKnown RBP24.75■■□□□ 1.55
CDH11-207ENST00000563255 ARAP1Q96P48 1450 aa24.7■■□□□ 1.55
CDH11-207ENST00000563255 WDR97A6NE52 1622 aa24.68■■□□□ 1.54
CDH11-207ENST00000563255 CHMP7Q8WUX9 453 aaPredicted RBP24.61■■□□□ 1.53
CDH11-207ENST00000563255 ABCA10Q8WWZ4 1543 aa24.61■■□□□ 1.53
CDH11-207ENST00000563255 SNAPC4Q5SXM2 1469 aa24.58■■□□□ 1.53
CDH11-207ENST00000563255 GRIN2BQ13224 1484 aa24.51■■□□□ 1.51
CDH11-207ENST00000563255 EEA1Q15075 1411 aa24.5■■□□□ 1.51
CDH11-207ENST00000563255 MAGI1Q96QZ7 1491 aaPredicted RBP24.5■■□□□ 1.51
CDH11-207ENST00000563255 KIF27Q86VH2 1401 aa24.49■■□□□ 1.51
CDH11-207ENST00000563255 ABCA5Q8WWZ7 1642 aa24.49■■□□□ 1.51
CDH11-207ENST00000563255 RUSC2Q8N2Y8 1516 aa24.47■■□□□ 1.51
CDH11-207ENST00000563255 SYNJ2O15056 1496 aa24.44■■□□□ 1.5
CDH11-207ENST00000563255 CLASP1Q7Z460 1538 aa24.43■■□□□ 1.5
CDH11-207ENST00000563255 PBRM1Q86U86 1689 aa24.43■■□□□ 1.5
CDH11-207ENST00000563255 GAPVD1Q14C86 1478 aa24.42■■□□□ 1.5
CDH11-207ENST00000563255 ERICH3Q5RHP9 1530 aa24.35■■□□□ 1.49
CDH11-207ENST00000563255 FAM9AQ8IZU1 332 aaPredicted RBP24.32■■□□□ 1.48
CDH11-207ENST00000563255 CSRNP3Q8WYN3 585 aa24.32■■□□□ 1.48
CDH11-207ENST00000563255 CUL7Q14999 1698 aa24.3■■□□□ 1.48
CDH11-207ENST00000563255 AEBP2Q6ZN18 517 aaPredicted RBP24.3■■□□□ 1.48
CDH11-207ENST00000563255 IGF1RP08069 1367 aa24.29■■□□□ 1.48
CDH11-207ENST00000563255 KIF21BO75037 1637 aa24.24■■□□□ 1.47
CDH11-207ENST00000563255 PRXQ9BXM0 1461 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms