RNA–Protein interactions for RNA: ENST00000563053.1

HIRIP3-202, Transcript of HIRA interacting protein 3, humanhuman

TSL 2

Gene HIRIP3, Length 1,686 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIRIP3-202ENST00000563053 NISCHQ9Y2I1 1504 aa37.13■■■■□ 3.54
HIRIP3-202ENST00000563053 CCDC180Q9P1Z9 1646 aa32.57■■■□□ 2.81
HIRIP3-202ENST00000563053 ABCC9O60706 1549 aa31.48■■■□□ 2.63
HIRIP3-202ENST00000563053 ZCCHC6Q5VYS8 1495 aaKnown RBP31.07■■■□□ 2.56
HIRIP3-202ENST00000563053 DCAF8L2P0C7V8 631 aa31.06■■■□□ 2.56
HIRIP3-202ENST00000563053 DCAF1Q9Y4B6 1507 aa30.59■■■□□ 2.49
HIRIP3-202ENST00000563053 NACADO15069 1562 aa30.48■■■□□ 2.47
HIRIP3-202ENST00000563053 MYO15BQ96JP2 1530 aa30.41■■■□□ 2.46
HIRIP3-202ENST00000563053 RB1CC1Q8TDY2 1594 aa30.39■■■□□ 2.46
HIRIP3-202ENST00000563053 SHROOM4Q9ULL8 1493 aa30.11■■■□□ 2.41
HIRIP3-202ENST00000563053 SCRIBQ14160 1630 aa30.04■■■□□ 2.4
HIRIP3-202ENST00000563053 UNC13AQ9UPW8 1703 aa29.79■■■□□ 2.36
HIRIP3-202ENST00000563053 PABPN1Q86U42 306 aaKnown RBP eCLIP29.63■■■□□ 2.33
HIRIP3-202ENST00000563053 BICRAQ9NZM4 1560 aa29.5■■■□□ 2.31
HIRIP3-202ENST00000563053 CECR2Q9BXF3 1484 aa28.98■■■□□ 2.23
HIRIP3-202ENST00000563053 MROH2BQ7Z745 1585 aa28.72■■■□□ 2.19
HIRIP3-202ENST00000563053 BAZ1AQ9NRL2 1556 aaPredicted RBP28.7■■■□□ 2.19
HIRIP3-202ENST00000563053 SMARCA4P51532 1647 aa28.67■■■□□ 2.18
HIRIP3-202ENST00000563053 EIF4G1Q04637 1599 aaKnown RBP28.67■■■□□ 2.18
HIRIP3-202ENST00000563053 SUPT5HO00267 1087 aaKnown RBP28.67■■■□□ 2.18
HIRIP3-202ENST00000563053 RSF1Q96T23 1441 aaPredicted RBP28.62■■■□□ 2.17
HIRIP3-202ENST00000563053 WIZO95785 1651 aa28.47■■■□□ 2.15
HIRIP3-202ENST00000563053 CC2D2AQ9P2K1 1620 aa28.41■■■□□ 2.14
HIRIP3-202ENST00000563053 ATAD2BQ9ULI0 1458 aa28.35■■■□□ 2.13
HIRIP3-202ENST00000563053 DNAJC5BQ9UF47 199 aa28.29■■■□□ 2.12
HIRIP3-202ENST00000563053 SMARCA2P51531 1590 aa28.27■■■□□ 2.12
HIRIP3-202ENST00000563053 PEG3Q9GZU2 1588 aa28.27■■■□□ 2.12
HIRIP3-202ENST00000563053 BAZ1BQ9UIG0 1483 aaKnown RBP28.17■■■□□ 2.1
HIRIP3-202ENST00000563053 NCAPD3P42695 1498 aa28.14■■■□□ 2.1
HIRIP3-202ENST00000563053 TOP2AP11388 1531 aaKnown RBP28.1■■■□□ 2.09
HIRIP3-202ENST00000563053 HMGXB3Q12766 1538 aa28.05■■■□□ 2.08
HIRIP3-202ENST00000563053 CCDC88BA6NC98 1476 aa27.85■■■□□ 2.05
HIRIP3-202ENST00000563053 NESP48681 1621 aa27.46■■□□□ 1.99
HIRIP3-202ENST00000563053 CADPSQ9ULU8 1353 aa27.43■■□□□ 1.98
HIRIP3-202ENST00000563053 CFTRP13569 1480 aa27.39■■□□□ 1.97
HIRIP3-202ENST00000563053 LAMC3Q9Y6N6 1575 aa27.29■■□□□ 1.96
HIRIP3-202ENST00000563053 PRDM2Q13029 1718 aa27.19■■□□□ 1.94
HIRIP3-202ENST00000563053 FANCD2Q9BXW9 1451 aa27.15■■□□□ 1.94
HIRIP3-202ENST00000563053 ABCC8Q09428 1581 aa27.14■■□□□ 1.94
HIRIP3-202ENST00000563053 PDS5BQ9NTI5 1447 aa27.11■■□□□ 1.93
HIRIP3-202ENST00000563053 KIF21AQ7Z4S6 1674 aa27.08■■□□□ 1.93
HIRIP3-202ENST00000563053 CHIC1Q5VXU3 224 aa27.06■■□□□ 1.92
HIRIP3-202ENST00000563053 CEP164Q9UPV0 1460 aa27.03■■□□□ 1.92
HIRIP3-202ENST00000563053 ERCC6Q03468 1493 aa27.02■■□□□ 1.92
HIRIP3-202ENST00000563053 WRNQ14191 1432 aaPredicted RBP eCLIP26.96■■□□□ 1.91
HIRIP3-202ENST00000563053 TRIM41Q8WV44 630 aa26.92■■□□□ 1.9
HIRIP3-202ENST00000563053 SYNJ1O43426 1573 aa26.9■■□□□ 1.9
HIRIP3-202ENST00000563053 CUX1P39880 1505 aa26.88■■□□□ 1.89
HIRIP3-202ENST00000563053 URB2Q14146 1524 aaKnown RBP26.85■■□□□ 1.89
HIRIP3-202ENST00000563053 MRC2Q9UBG0 1479 aa26.82■■□□□ 1.88
HIRIP3-202ENST00000563053 TOPBP1Q92547 1522 aa26.79■■□□□ 1.88
HIRIP3-202ENST00000563053 TOP2BQ02880 1626 aa26.77■■□□□ 1.88
HIRIP3-202ENST00000563053 DNMBPQ6XZF7 1577 aa26.77■■□□□ 1.88
HIRIP3-202ENST00000563053 BIVM-ERCC5R4GMW8 1640 aa26.74■■□□□ 1.87
HIRIP3-202ENST00000563053 THOC2Q8NI27 1593 aaKnown RBP26.74■■□□□ 1.87
HIRIP3-202ENST00000563053 FGD5Q6ZNL6 1462 aa26.69■■□□□ 1.86
HIRIP3-202ENST00000563053 WDR62O43379 1518 aa26.68■■□□□ 1.86
HIRIP3-202ENST00000563053 POLA1P09884 1462 aaPredicted RBP26.62■■□□□ 1.85
HIRIP3-202ENST00000563053 RAD54L2Q9Y4B4 1467 aa26.59■■□□□ 1.85
HIRIP3-202ENST00000563053 SOGA1O94964 1423 aa26.54■■□□□ 1.84
HIRIP3-202ENST00000563053 FAM9AQ8IZU1 332 aaPredicted RBP26.54■■□□□ 1.84
HIRIP3-202ENST00000563053 CUX2O14529 1486 aa26.5■■□□□ 1.83
HIRIP3-202ENST00000563053 RUSC2Q8N2Y8 1516 aa26.46■■□□□ 1.83
HIRIP3-202ENST00000563053 TARBP1Q13395 1621 aaKnown RBP26.41■■□□□ 1.82
HIRIP3-202ENST00000563053 IFT140Q96RY7 1462 aa26.39■■□□□ 1.81
HIRIP3-202ENST00000563053 TDRD9Q8NDG6 1382 aaKnown RBP26.38■■□□□ 1.81
HIRIP3-202ENST00000563053 ABCA10Q8WWZ4 1543 aa26.37■■□□□ 1.81
HIRIP3-202ENST00000563053 ZNF608Q9ULD9 1512 aaPredicted RBP26.35■■□□□ 1.81
HIRIP3-202ENST00000563053 WDR97A6NE52 1622 aa26.34■■□□□ 1.81
HIRIP3-202ENST00000563053 KIF27Q86VH2 1401 aa26.31■■□□□ 1.8
HIRIP3-202ENST00000563053 AQRO60306 1485 aaKnown RBP eCLIP26.31■■□□□ 1.89e-10■■■■□ 21
HIRIP3-202ENST00000563053 EHMT2Q96KQ7 1210 aa26.28■■□□□ 1.8
HIRIP3-202ENST00000563053 GAPVD1Q14C86 1478 aa26.23■■□□□ 1.79
HIRIP3-202ENST00000563053 ABCA5Q8WWZ7 1642 aa26.22■■□□□ 1.79
HIRIP3-202ENST00000563053 CSRNP3Q8WYN3 585 aa26.21■■□□□ 1.79
HIRIP3-202ENST00000563053 EIF4G3O43432 1585 aaKnown RBP26.21■■□□□ 1.79
HIRIP3-202ENST00000563053 EEA1Q15075 1411 aa26.19■■□□□ 1.78
HIRIP3-202ENST00000563053 IGF1RP08069 1367 aa26.14■■□□□ 1.78
HIRIP3-202ENST00000563053 PBRM1Q86U86 1689 aa26.12■■□□□ 1.77
HIRIP3-202ENST00000563053 LOC105371045A0A1W2PR82 267 aa26.09■■□□□ 1.77
HIRIP3-202ENST00000563053 GRIN2BQ13224 1484 aa26.08■■□□□ 1.77
HIRIP3-202ENST00000563053 ERICH3Q5RHP9 1530 aa26.04■■□□□ 1.76
HIRIP3-202ENST00000563053 SNAPC4Q5SXM2 1469 aa26.03■■□□□ 1.76
HIRIP3-202ENST00000563053 CARMIL1Q5VZK9 1371 aa26.02■■□□□ 1.76
HIRIP3-202ENST00000563053 PRXQ9BXM0 1461 aa25.97■■□□□ 1.75
HIRIP3-202ENST00000563053 RAPGEF2Q9Y4G8 1499 aa25.97■■□□□ 1.75
HIRIP3-202ENST00000563053 CUL7Q14999 1698 aa25.95■■□□□ 1.75
HIRIP3-202ENST00000563053 FBLN2P98095 1184 aa25.95■■□□□ 1.74
HIRIP3-202ENST00000563053 ADAMTS12P58397 1594 aa25.94■■□□□ 1.74
HIRIP3-202ENST00000563053 KIF21BO75037 1637 aa25.92■■□□□ 1.74
HIRIP3-202ENST00000563053 FHAD1B1AJZ9 1412 aa25.9■■□□□ 1.74
HIRIP3-202ENST00000563053 MAGI1Q96QZ7 1491 aaPredicted RBP25.9■■□□□ 1.74
HIRIP3-202ENST00000563053 UBTFP17480 764 aaKnown RBP25.9■■□□□ 1.74
HIRIP3-202ENST00000563053 GOLGA3Q08378 1498 aa25.89■■□□□ 1.73
HIRIP3-202ENST00000563053 CHMP7Q8WUX9 453 aaPredicted RBP25.87■■□□□ 1.73
HIRIP3-202ENST00000563053 SYNJ2O15056 1496 aa25.83■■□□□ 1.72
HIRIP3-202ENST00000563053 RANGAP1P46060 587 aaPredicted RBP25.78■■□□□ 1.72
HIRIP3-202ENST00000563053 GRIN2AQ12879 1464 aa25.77■■□□□ 1.72
HIRIP3-202ENST00000563053 CHD1O14646 1710 aa25.76■■□□□ 1.71
HIRIP3-202ENST00000563053 TNIKQ9UKE5 1360 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms