RNA–Protein interactions for RNA: ENST00000562997.5

PKM-207, Transcript of pyruvate kinase M1/2, humanhuman

TSL 4

Gene PKM, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-207ENST00000562997 NISCHQ9Y2I1 1504 aa25.68■■□□□ 1.7
PKM-207ENST00000562997 CCDC180Q9P1Z9 1646 aa22.95■■□□□ 1.26
PKM-207ENST00000562997 ABCC9O60706 1549 aa22.56■■□□□ 1.2
PKM-207ENST00000562997 RB1CC1Q8TDY2 1594 aa21.63■■□□□ 1.05
PKM-207ENST00000562997 NACADO15069 1562 aa21.59■■□□□ 1.05
PKM-207ENST00000562997 MYO15BQ96JP2 1530 aa21.48■■□□□ 1.03
PKM-207ENST00000562997 ZCCHC6Q5VYS8 1495 aaKnown RBP21.37■■□□□ 1.01
PKM-207ENST00000562997 UNC13AQ9UPW8 1703 aa21.31■■□□□ 1
PKM-207ENST00000562997 DCAF1Q9Y4B6 1507 aa21.29■■□□□ 1
PKM-207ENST00000562997 DCAF8L2P0C7V8 631 aa21.25■□□□□ 0.99
PKM-207ENST00000562997 BICRAQ9NZM4 1560 aa21.14■□□□□ 0.97
PKM-207ENST00000562997 DNAJC5BQ9UF47 199 aa21.04■□□□□ 0.96
PKM-207ENST00000562997 PABPN1Q86U42 306 aaKnown RBP eCLIP21.01■□□□□ 0.95
PKM-207ENST00000562997 SCRIBQ14160 1630 aa20.83■□□□□ 0.93
PKM-207ENST00000562997 SHROOM4Q9ULL8 1493 aa20.81■□□□□ 0.92
PKM-207ENST00000562997 EIF4G1Q04637 1599 aaKnown RBP20.5■□□□□ 0.87
PKM-207ENST00000562997 CC2D2AQ9P2K1 1620 aa20.47■□□□□ 0.87
PKM-207ENST00000562997 CECR2Q9BXF3 1484 aa20.3■□□□□ 0.84
PKM-207ENST00000562997 SMARCA4P51532 1647 aa19.98■□□□□ 0.79
PKM-207ENST00000562997 NCAPD3P42695 1498 aa19.96■□□□□ 0.79
PKM-207ENST00000562997 ATAD2BQ9ULI0 1458 aa19.92■□□□□ 0.78
PKM-207ENST00000562997 BAZ1AQ9NRL2 1556 aaPredicted RBP19.87■□□□□ 0.77
PKM-207ENST00000562997 PEG3Q9GZU2 1588 aa19.86■□□□□ 0.77
PKM-207ENST00000562997 HMGXB3Q12766 1538 aa19.83■□□□□ 0.77
PKM-207ENST00000562997 SMARCA2P51531 1590 aa19.83■□□□□ 0.76
PKM-207ENST00000562997 MROH2BQ7Z745 1585 aa19.8■□□□□ 0.76
PKM-207ENST00000562997 BAZ1BQ9UIG0 1483 aaKnown RBP19.65■□□□□ 0.74
PKM-207ENST00000562997 WIZO95785 1651 aa19.56■□□□□ 0.72
PKM-207ENST00000562997 NESP48681 1621 aa19.52■□□□□ 0.72
PKM-207ENST00000562997 RSF1Q96T23 1441 aaPredicted RBP19.48■□□□□ 0.71
PKM-207ENST00000562997 LAMC3Q9Y6N6 1575 aa19.43■□□□□ 0.7
PKM-207ENST00000562997 CUX2O14529 1486 aa19.36■□□□□ 0.69
PKM-207ENST00000562997 ERCC6Q03468 1493 aa19.35■□□□□ 0.69
PKM-207ENST00000562997 THOC2Q8NI27 1593 aaKnown RBP19.32■□□□□ 0.68
PKM-207ENST00000562997 TOP2AP11388 1531 aaKnown RBP19.32■□□□□ 0.68
PKM-207ENST00000562997 KIF21AQ7Z4S6 1674 aa19.31■□□□□ 0.68
PKM-207ENST00000562997 CADPSQ9ULU8 1353 aa19.3■□□□□ 0.68
PKM-207ENST00000562997 PDS5BQ9NTI5 1447 aa19.22■□□□□ 0.67
PKM-207ENST00000562997 CFTRP13569 1480 aa19.19■□□□□ 0.66
PKM-207ENST00000562997 WDR62O43379 1518 aa19.1■□□□□ 0.65
PKM-207ENST00000562997 CCDC88BA6NC98 1476 aa19.09■□□□□ 0.65
PKM-207ENST00000562997 MRC2Q9UBG0 1479 aa19.09■□□□□ 0.65
PKM-207ENST00000562997 PRDM2Q13029 1718 aa19.07■□□□□ 0.64
PKM-207ENST00000562997 FANCD2Q9BXW9 1451 aa19.07■□□□□ 0.64
PKM-207ENST00000562997 DNAJC5Q9H3Z4 198 aa19.04■□□□□ 0.64
PKM-207ENST00000562997 CEP164Q9UPV0 1460 aa19.03■□□□□ 0.64
PKM-207ENST00000562997 URB2Q14146 1524 aaKnown RBP18.96■□□□□ 0.63
PKM-207ENST00000562997 TOPBP1Q92547 1522 aa18.78■□□□□ 0.6
PKM-207ENST00000562997 DNMBPQ6XZF7 1577 aa18.72■□□□□ 0.59
PKM-207ENST00000562997 ABCC8Q09428 1581 aa18.71■□□□□ 0.59
PKM-207ENST00000562997 IFT140Q96RY7 1462 aa18.66■□□□□ 0.58
PKM-207ENST00000562997 ZNF608Q9ULD9 1512 aaPredicted RBP18.66■□□□□ 0.58
PKM-207ENST00000562997 TARBP1Q13395 1621 aaKnown RBP18.66■□□□□ 0.58
PKM-207ENST00000562997 POLA1P09884 1462 aaPredicted RBP18.6■□□□□ 0.57
PKM-207ENST00000562997 SUPT5HO00267 1087 aaKnown RBP18.6■□□□□ 0.57
PKM-207ENST00000562997 CUX1P39880 1505 aa18.59■□□□□ 0.57
PKM-207ENST00000562997 EIF4G3O43432 1585 aaKnown RBP18.56■□□□□ 0.56
PKM-207ENST00000562997 RAD54L2Q9Y4B4 1467 aa18.51■□□□□ 0.55
PKM-207ENST00000562997 FGD5Q6ZNL6 1462 aa18.5■□□□□ 0.55
PKM-207ENST00000562997 AQRO60306 1485 aaKnown RBP eCLIP18.48■□□□□ 0.551e-16■■■■■ 33.5
PKM-207ENST00000562997 WDR97A6NE52 1622 aa18.47■□□□□ 0.55
PKM-207ENST00000562997 SOGA1O94964 1423 aa18.46■□□□□ 0.55
PKM-207ENST00000562997 OSCARQ8IYS5 282 aa18.43■□□□□ 0.54
PKM-207ENST00000562997 CHD1O14646 1710 aa18.4■□□□□ 0.54
PKM-207ENST00000562997 TDRD9Q8NDG6 1382 aaKnown RBP18.39■□□□□ 0.53
PKM-207ENST00000562997 BIVM-ERCC5R4GMW8 1640 aa18.38■□□□□ 0.53
PKM-207ENST00000562997 TOP2BQ02880 1626 aa18.35■□□□□ 0.53
PKM-207ENST00000562997 SYNJ1O43426 1573 aa18.34■□□□□ 0.53
PKM-207ENST00000562997 ABCA10Q8WWZ4 1543 aa18.34■□□□□ 0.53
PKM-207ENST00000562997 ABCA5Q8WWZ7 1642 aa18.33■□□□□ 0.52
PKM-207ENST00000562997 WRNQ14191 1432 aaPredicted RBP eCLIP18.29■□□□□ 0.52
PKM-207ENST00000562997 PBRM1Q86U86 1689 aa18.28■□□□□ 0.52
PKM-207ENST00000562997 GRIN2BQ13224 1484 aa18.28■□□□□ 0.52
PKM-207ENST00000562997 SNAPC4Q5SXM2 1469 aa18.28■□□□□ 0.52
PKM-207ENST00000562997 RIMBP3CA6NJZ7 1639 aa18.28■□□□□ 0.52
PKM-207ENST00000562997 RIMBP3BA6NNM3 1639 aa18.28■□□□□ 0.52
PKM-207ENST00000562997 RIMBP3Q9UFD9 1639 aa18.28■□□□□ 0.52
PKM-207ENST00000562997 MAGI1Q96QZ7 1491 aaPredicted RBP18.27■□□□□ 0.52
PKM-207ENST00000562997 GAPVD1Q14C86 1478 aa18.26■□□□□ 0.51
PKM-207ENST00000562997 ARHGEF11O15085 1522 aa18.23■□□□□ 0.51
PKM-207ENST00000562997 CLASP1Q7Z460 1538 aa18.23■□□□□ 0.51
PKM-207ENST00000562997 SYNJ2O15056 1496 aa18.2■□□□□ 0.5
PKM-207ENST00000562997 ADAMTS12P58397 1594 aa18.13■□□□□ 0.49
PKM-207ENST00000562997 TRIM41Q8WV44 630 aa18.13■□□□□ 0.49
PKM-207ENST00000562997 FBLN2P98095 1184 aa18.11■□□□□ 0.49
PKM-207ENST00000562997 ERICH3Q5RHP9 1530 aa18.11■□□□□ 0.49
PKM-207ENST00000562997 ARAP1Q96P48 1450 aa18.09■□□□□ 0.49
PKM-207ENST00000562997 GRIN2AQ12879 1464 aa18.08■□□□□ 0.49
PKM-207ENST00000562997 CHMP7Q8WUX9 453 aaPredicted RBP18.08■□□□□ 0.48
PKM-207ENST00000562997 NUP160Q12769 1436 aa18.06■□□□□ 0.48
PKM-207ENST00000562997 CEP170Q5SW79 1584 aa18.04■□□□□ 0.48
PKM-207ENST00000562997 FHAD1B1AJZ9 1412 aa18.04■□□□□ 0.48
PKM-207ENST00000562997 SHROOM2Q13796 1616 aa17.99■□□□□ 0.47
PKM-207ENST00000562997 CYB5RLQ6IPT4 315 aa17.96■□□□□ 0.47
PKM-207ENST00000562997 ERCC6L2Q5T890 1561 aa17.96■□□□□ 0.46
PKM-207ENST00000562997 IGF1RP08069 1367 aa17.94■□□□□ 0.46
PKM-207ENST00000562997 KIF27Q86VH2 1401 aa17.89■□□□□ 0.46
PKM-207ENST00000562997 CUL7Q14999 1698 aa17.88■□□□□ 0.45
PKM-207ENST00000562997 RUSC2Q8N2Y8 1516 aa17.88■□□□□ 0.45
PKM-207ENST00000562997 KIAA0586Q9BVV6 1533 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms