RNA–Protein interactions for RNA: ENST00000562953.5

POLR2C-203, Transcript of RNA polymerase II subunit C, humanhuman

TSL 2

Gene POLR2C, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2C-203ENST00000562953 NISCHQ9Y2I1 1504 aa31.85■■■□□ 2.69
POLR2C-203ENST00000562953 ABCC9O60706 1549 aa29.31■■■□□ 2.28
POLR2C-203ENST00000562953 CCDC180Q9P1Z9 1646 aa28.75■■■□□ 2.19
POLR2C-203ENST00000562953 DNAJC5BQ9UF47 199 aa28.02■■■□□ 2.08
POLR2C-203ENST00000562953 RB1CC1Q8TDY2 1594 aa27.69■■■□□ 2.02
POLR2C-203ENST00000562953 NACADO15069 1562 aa27.37■■□□□ 1.97
POLR2C-203ENST00000562953 PABPN1Q86U42 306 aaKnown RBP eCLIP27.27■■□□□ 1.96
POLR2C-203ENST00000562953 DCAF8L2P0C7V8 631 aa27.24■■□□□ 1.95
POLR2C-203ENST00000562953 UNC13AQ9UPW8 1703 aa26.93■■□□□ 1.9
POLR2C-203ENST00000562953 BICRAQ9NZM4 1560 aa26.84■■□□□ 1.89
POLR2C-203ENST00000562953 MYO15BQ96JP2 1530 aa26.83■■□□□ 1.89
POLR2C-203ENST00000562953 CECR2Q9BXF3 1484 aa26.49■■□□□ 1.83
POLR2C-203ENST00000562953 SHROOM4Q9ULL8 1493 aa26.49■■□□□ 1.83
POLR2C-203ENST00000562953 CC2D2AQ9P2K1 1620 aa26.43■■□□□ 1.82
POLR2C-203ENST00000562953 DCAF1Q9Y4B6 1507 aa26.28■■□□□ 1.8
POLR2C-203ENST00000562953 EIF4G1Q04637 1599 aaKnown RBP26.24■■□□□ 1.79
POLR2C-203ENST00000562953 ZCCHC6Q5VYS8 1495 aaKnown RBP26.23■■□□□ 1.79
POLR2C-203ENST00000562953 DNAJC5Q9H3Z4 198 aa26.18■■□□□ 1.78
POLR2C-203ENST00000562953 SCRIBQ14160 1630 aa26.14■■□□□ 1.78
POLR2C-203ENST00000562953 CUX2O14529 1486 aa25.51■■□□□ 1.67
POLR2C-203ENST00000562953 ERCC6Q03468 1493 aa25.38■■□□□ 1.65
POLR2C-203ENST00000562953 NCAPD3P42695 1498 aa25.31■■□□□ 1.64
POLR2C-203ENST00000562953 ATAD2BQ9ULI0 1458 aa25.12■■□□□ 1.61
POLR2C-203ENST00000562953 SMARCA2P51531 1590 aa25.02■■□□□ 1.6
POLR2C-203ENST00000562953 HMGXB3Q12766 1538 aa25.01■■□□□ 1.59
POLR2C-203ENST00000562953 NESP48681 1621 aa25.01■■□□□ 1.59
POLR2C-203ENST00000562953 SMARCA4P51532 1647 aa24.91■■□□□ 1.58
POLR2C-203ENST00000562953 BAZ1BQ9UIG0 1483 aaKnown RBP24.84■■□□□ 1.57
POLR2C-203ENST00000562953 THOC2Q8NI27 1593 aaKnown RBP24.8■■□□□ 1.56
POLR2C-203ENST00000562953 TRIM41Q8WV44 630 aa24.79■■□□□ 1.56
POLR2C-203ENST00000562953 LAMC3Q9Y6N6 1575 aa24.78■■□□□ 1.56
POLR2C-203ENST00000562953 BAZ1AQ9NRL2 1556 aaPredicted RBP24.76■■□□□ 1.55
POLR2C-203ENST00000562953 PDS5BQ9NTI5 1447 aa24.72■■□□□ 1.55
POLR2C-203ENST00000562953 PEG3Q9GZU2 1588 aa24.69■■□□□ 1.54
POLR2C-203ENST00000562953 KIF21AQ7Z4S6 1674 aa24.61■■□□□ 1.53
POLR2C-203ENST00000562953 CADPSQ9ULU8 1353 aa24.53■■□□□ 1.52
POLR2C-203ENST00000562953 MROH2BQ7Z745 1585 aa24.5■■□□□ 1.51
POLR2C-203ENST00000562953 MRC2Q9UBG0 1479 aa24.47■■□□□ 1.51
POLR2C-203ENST00000562953 WDR62O43379 1518 aa24.4■■□□□ 1.5
POLR2C-203ENST00000562953 OSCARQ8IYS5 282 aa24.37■■□□□ 1.49
POLR2C-203ENST00000562953 CEP164Q9UPV0 1460 aa24.27■■□□□ 1.48
POLR2C-203ENST00000562953 FANCD2Q9BXW9 1451 aa24.21■■□□□ 1.47
POLR2C-203ENST00000562953 WIZO95785 1651 aa24.16■■□□□ 1.46
POLR2C-203ENST00000562953 CFTRP13569 1480 aa24.1■■□□□ 1.45
POLR2C-203ENST00000562953 URB2Q14146 1524 aaKnown RBP24■■□□□ 1.43
POLR2C-203ENST00000562953 RIMBP3CA6NJZ7 1639 aa23.94■■□□□ 1.42
POLR2C-203ENST00000562953 RIMBP3BA6NNM3 1639 aa23.94■■□□□ 1.42
POLR2C-203ENST00000562953 RIMBP3Q9UFD9 1639 aa23.94■■□□□ 1.42
POLR2C-203ENST00000562953 RSF1Q96T23 1441 aaPredicted RBP23.84■■□□□ 1.41
POLR2C-203ENST00000562953 ARHGEF11O15085 1522 aa23.84■■□□□ 1.41
POLR2C-203ENST00000562953 TOP2AP11388 1531 aaKnown RBP23.84■■□□□ 1.41
POLR2C-203ENST00000562953 IFT140Q96RY7 1462 aa23.82■■□□□ 1.4
POLR2C-203ENST00000562953 CYB5RLQ6IPT4 315 aa23.81■■□□□ 1.4
POLR2C-203ENST00000562953 ZNF608Q9ULD9 1512 aaPredicted RBP23.79■■□□□ 1.4
POLR2C-203ENST00000562953 TRHP20396 242 aaPredicted RBP23.73■■□□□ 1.39
POLR2C-203ENST00000562953 PRDM2Q13029 1718 aa23.7■■□□□ 1.38
POLR2C-203ENST00000562953 TOPBP1Q92547 1522 aa23.67■■□□□ 1.38
POLR2C-203ENST00000562953 ABCC8Q09428 1581 aa23.66■■□□□ 1.38
POLR2C-203ENST00000562953 CCDC88BA6NC98 1476 aa23.62■■□□□ 1.37
POLR2C-203ENST00000562953 EIF4G3O43432 1585 aaKnown RBP23.6■■□□□ 1.37
POLR2C-203ENST00000562953 FBLN2P98095 1184 aa23.59■■□□□ 1.37
POLR2C-203ENST00000562953 AQRO60306 1485 aaKnown RBP eCLIP23.56■■□□□ 1.361e-6■■■□□ 18.4
POLR2C-203ENST00000562953 ARAP1Q96P48 1450 aa23.55■■□□□ 1.36
POLR2C-203ENST00000562953 DNMBPQ6XZF7 1577 aa23.52■■□□□ 1.36
POLR2C-203ENST00000562953 CHD1O14646 1710 aa23.5■■□□□ 1.35
POLR2C-203ENST00000562953 TARBP1Q13395 1621 aaKnown RBP23.47■■□□□ 1.35
POLR2C-203ENST00000562953 AEBP2Q6ZN18 517 aaPredicted RBP23.46■■□□□ 1.35
POLR2C-203ENST00000562953 POLA1P09884 1462 aaPredicted RBP23.39■■□□□ 1.34
POLR2C-203ENST00000562953 TDRD9Q8NDG6 1382 aaKnown RBP23.36■■□□□ 1.33
POLR2C-203ENST00000562953 SOGA1O94964 1423 aa23.35■■□□□ 1.33
POLR2C-203ENST00000562953 CHMP7Q8WUX9 453 aaPredicted RBP23.34■■□□□ 1.33
POLR2C-203ENST00000562953 RAD54L2Q9Y4B4 1467 aa23.32■■□□□ 1.32
POLR2C-203ENST00000562953 SNAPC4Q5SXM2 1469 aa23.26■■□□□ 1.31
POLR2C-203ENST00000562953 CLASP1Q7Z460 1538 aa23.26■■□□□ 1.31
POLR2C-203ENST00000562953 SYNJ1O43426 1573 aa23.24■■□□□ 1.31
POLR2C-203ENST00000562953 WDR97A6NE52 1622 aa23.22■■□□□ 1.31
POLR2C-203ENST00000562953 MAGI1Q96QZ7 1491 aaPredicted RBP23.22■■□□□ 1.31
POLR2C-203ENST00000562953 GRIN2BQ13224 1484 aa23.17■■□□□ 1.3
POLR2C-203ENST00000562953 FGD5Q6ZNL6 1462 aa23.17■■□□□ 1.3
POLR2C-203ENST00000562953 SYNJ2O15056 1496 aa23.15■■□□□ 1.3
POLR2C-203ENST00000562953 GAPVD1Q14C86 1478 aa23.11■■□□□ 1.29
POLR2C-203ENST00000562953 CUX1P39880 1505 aa23.04■■□□□ 1.28
POLR2C-203ENST00000562953 PBRM1Q86U86 1689 aa22.93■■□□□ 1.26
POLR2C-203ENST00000562953 ABCA10Q8WWZ4 1543 aa22.89■■□□□ 1.26
POLR2C-203ENST00000562953 GRIN2AQ12879 1464 aa22.85■■□□□ 1.25
POLR2C-203ENST00000562953 ERCC6L2Q5T890 1561 aa22.84■■□□□ 1.25
POLR2C-203ENST00000562953 ABCA5Q8WWZ7 1642 aa22.84■■□□□ 1.25
POLR2C-203ENST00000562953 CEP170Q5SW79 1584 aa22.8■■□□□ 1.24
POLR2C-203ENST00000562953 NUP160Q12769 1436 aa22.8■■□□□ 1.24
POLR2C-203ENST00000562953 WRNQ14191 1432 aaPredicted RBP eCLIP22.75■■□□□ 1.23
POLR2C-203ENST00000562953 FHAD1B1AJZ9 1412 aa22.72■■□□□ 1.23
POLR2C-203ENST00000562953 SHROOM2Q13796 1616 aa22.71■■□□□ 1.23
POLR2C-203ENST00000562953 ADAMTS12P58397 1594 aa22.71■■□□□ 1.23
POLR2C-203ENST00000562953 NPM1P06748 294 aaKnown RBP eCLIP22.67■■□□□ 1.22
POLR2C-203ENST00000562953 PRG4Q92954 1404 aaPredicted RBP22.66■■□□□ 1.22
POLR2C-203ENST00000562953 KIF13AQ9H1H9 1805 aa22.66■■□□□ 1.22
POLR2C-203ENST00000562953 FAM69CQ0P6D2 419 aa22.66■■□□□ 1.22
POLR2C-203ENST00000562953 JPH4Q96JJ6 628 aa22.66■■□□□ 1.22
POLR2C-203ENST00000562953 ERICH3Q5RHP9 1530 aa22.6■■□□□ 1.21
POLR2C-203ENST00000562953 ABCC10Q5T3U5 1492 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms