RNA–Protein interactions for RNA: ENST00000562946.5

TMEM87A-205, Transcript of transmembrane protein 87A, humanhuman

TSL 2

Gene TMEM87A, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-205ENST00000562946 NISCHQ9Y2I1 1504 aa21.56■■□□□ 1.04
TMEM87A-205ENST00000562946 AEBP2Q6ZN18 517 aaPredicted RBP20.15■□□□□ 0.82
TMEM87A-205ENST00000562946 CHIC1Q5VXU3 224 aa19.99■□□□□ 0.79
TMEM87A-205ENST00000562946 CCDC180Q9P1Z9 1646 aa19.23■□□□□ 0.67
TMEM87A-205ENST00000562946 ABCC9O60706 1549 aa18.87■□□□□ 0.61
TMEM87A-205ENST00000562946 RB1CC1Q8TDY2 1594 aa18.12■□□□□ 0.49
TMEM87A-205ENST00000562946 NACADO15069 1562 aa18.09■□□□□ 0.49
TMEM87A-205ENST00000562946 DCAF8L2P0C7V8 631 aa18.02■□□□□ 0.48
TMEM87A-205ENST00000562946 MYO15BQ96JP2 1530 aa17.95■□□□□ 0.46
TMEM87A-205ENST00000562946 ZCCHC6Q5VYS8 1495 aaKnown RBP17.93■□□□□ 0.46
TMEM87A-205ENST00000562946 DCAF1Q9Y4B6 1507 aa17.83■□□□□ 0.45
TMEM87A-205ENST00000562946 UNC13AQ9UPW8 1703 aa17.8■□□□□ 0.44
TMEM87A-205ENST00000562946 PHF23Q9BUL5 403 aaPredicted RBP17.72■□□□□ 0.43
TMEM87A-205ENST00000562946 PABPN1Q86U42 306 aaKnown RBP eCLIP17.62■□□□□ 0.41
TMEM87A-205ENST00000562946 BICRAQ9NZM4 1560 aa17.62■□□□□ 0.41
TMEM87A-205ENST00000562946 SCRIBQ14160 1630 aa17.51■□□□□ 0.39
TMEM87A-205ENST00000562946 DNAJC5BQ9UF47 199 aa17.44■□□□□ 0.38
TMEM87A-205ENST00000562946 SHROOM4Q9ULL8 1493 aa17.36■□□□□ 0.37
TMEM87A-205ENST00000562946 EIF4G1Q04637 1599 aaKnown RBP17.13■□□□□ 0.33
TMEM87A-205ENST00000562946 CC2D2AQ9P2K1 1620 aa17.09■□□□□ 0.33
TMEM87A-205ENST00000562946 CECR2Q9BXF3 1484 aa16.96■□□□□ 0.31
TMEM87A-205ENST00000562946 SENP3Q9H4L4 574 aaPredicted RBP16.87■□□□□ 0.29
TMEM87A-205ENST00000562946 SMARCA4P51532 1647 aa16.76■□□□□ 0.27
TMEM87A-205ENST00000562946 BAZ1AQ9NRL2 1556 aaPredicted RBP16.71■□□□□ 0.27
TMEM87A-205ENST00000562946 NCAPD3P42695 1498 aa16.68■□□□□ 0.26
TMEM87A-205ENST00000562946 ATAD2BQ9ULI0 1458 aa16.68■□□□□ 0.26
TMEM87A-205ENST00000562946 SMARCA2P51531 1590 aa16.64■□□□□ 0.26
TMEM87A-205ENST00000562946 MROH2BQ7Z745 1585 aa16.62■□□□□ 0.25
TMEM87A-205ENST00000562946 PEG3Q9GZU2 1588 aa16.6■□□□□ 0.25
TMEM87A-205ENST00000562946 HMGXB3Q12766 1538 aa16.59■□□□□ 0.25
TMEM87A-205ENST00000562946 BAZ1BQ9UIG0 1483 aaKnown RBP16.51■□□□□ 0.23
TMEM87A-205ENST00000562946 WIZO95785 1651 aa16.45■□□□□ 0.22
TMEM87A-205ENST00000562946 RSF1Q96T23 1441 aaPredicted RBP16.39■□□□□ 0.21
TMEM87A-205ENST00000562946 PLPPR3Q6T4P5 718 aa16.36■□□□□ 0.21
TMEM87A-205ENST00000562946 NESP48681 1621 aa16.32■□□□□ 0.2
TMEM87A-205ENST00000562946 LAMC3Q9Y6N6 1575 aa16.26■□□□□ 0.19
TMEM87A-205ENST00000562946 ERCC6Q03468 1493 aa16.25■□□□□ 0.19
TMEM87A-205ENST00000562946 TOP2AP11388 1531 aaKnown RBP16.23■□□□□ 0.19
TMEM87A-205ENST00000562946 CADPSQ9ULU8 1353 aa16.19■□□□□ 0.18
TMEM87A-205ENST00000562946 KIF21AQ7Z4S6 1674 aa16.15■□□□□ 0.18
TMEM87A-205ENST00000562946 CUX2O14529 1486 aa16.13■□□□□ 0.17
TMEM87A-205ENST00000562946 PDS5BQ9NTI5 1447 aa16.13■□□□□ 0.17
TMEM87A-205ENST00000562946 THOC2Q8NI27 1593 aaKnown RBP16.1■□□□□ 0.17
TMEM87A-205ENST00000562946 CFTRP13569 1480 aa16.08■□□□□ 0.16
TMEM87A-205ENST00000562946 CCDC88BA6NC98 1476 aa16.06■□□□□ 0.16
TMEM87A-205ENST00000562946 PRDM2Q13029 1718 aa16.01■□□□□ 0.15
TMEM87A-205ENST00000562946 FANCD2Q9BXW9 1451 aa15.99■□□□□ 0.15
TMEM87A-205ENST00000562946 CEP164Q9UPV0 1460 aa15.98■□□□□ 0.15
TMEM87A-205ENST00000562946 MRC2Q9UBG0 1479 aa15.97■□□□□ 0.15
TMEM87A-205ENST00000562946 WDR62O43379 1518 aa15.94■□□□□ 0.14
TMEM87A-205ENST00000562946 SUPT5HO00267 1087 aaKnown RBP15.87■□□□□ 0.13
TMEM87A-205ENST00000562946 URB2Q14146 1524 aaKnown RBP15.86■□□□□ 0.13
TMEM87A-205ENST00000562946 DNAJC5Q9H3Z4 198 aa15.77■□□□□ 0.11
TMEM87A-205ENST00000562946 TOPBP1Q92547 1522 aa15.74■□□□□ 0.11
TMEM87A-205ENST00000562946 ABCC8Q09428 1581 aa15.72■□□□□ 0.11
TMEM87A-205ENST00000562946 FOXD1Q16676 465 aa15.71■□□□□ 0.11
TMEM87A-205ENST00000562946 DNMBPQ6XZF7 1577 aa15.71■□□□□ 0.11
TMEM87A-205ENST00000562946 IFT140Q96RY7 1462 aa15.65■□□□□ 0.1
TMEM87A-205ENST00000562946 TARBP1Q13395 1621 aaKnown RBP15.61■□□□□ 0.09
TMEM87A-205ENST00000562946 ZNF608Q9ULD9 1512 aaPredicted RBP15.6■□□□□ 0.09
TMEM87A-205ENST00000562946 POLA1P09884 1462 aaPredicted RBP15.6■□□□□ 0.09
TMEM87A-205ENST00000562946 CUX1P39880 1505 aa15.6■□□□□ 0.09
TMEM87A-205ENST00000562946 FGD5Q6ZNL6 1462 aa15.54■□□□□ 0.08
TMEM87A-205ENST00000562946 EIF4G3O43432 1585 aaKnown RBP15.54■□□□□ 0.08
TMEM87A-205ENST00000562946 RAD54L2Q9Y4B4 1467 aa15.53■□□□□ 0.08
TMEM87A-205ENST00000562946 SOGA1O94964 1423 aa15.52■□□□□ 0.08
TMEM87A-205ENST00000562946 PPP6R1Q9UPN7 881 aa15.51■□□□□ 0.07
TMEM87A-205ENST00000562946 AQRO60306 1485 aaKnown RBP eCLIP15.5■□□□□ 0.078e-7■□□□□ 11.3
TMEM87A-205ENST00000562946 ADRA2BP18089 450 aa15.5■□□□□ 0.07
TMEM87A-205ENST00000562946 WDR97A6NE52 1622 aa15.46■□□□□ 0.07
TMEM87A-205ENST00000562946 OSCARQ8IYS5 282 aa15.45■□□□□ 0.06
TMEM87A-205ENST00000562946 BIVM-ERCC5R4GMW8 1640 aa15.45■□□□□ 0.06
TMEM87A-205ENST00000562946 TDRD9Q8NDG6 1382 aaKnown RBP15.45■□□□□ 0.06
TMEM87A-205ENST00000562946 TOP2BQ02880 1626 aa15.44■□□□□ 0.06
TMEM87A-205ENST00000562946 WRNQ14191 1432 aaPredicted RBP eCLIP15.43■□□□□ 0.06
TMEM87A-205ENST00000562946 SYNJ1O43426 1573 aa15.43■□□□□ 0.06
TMEM87A-205ENST00000562946 CHD1O14646 1710 aa15.4■□□□□ 0.06
TMEM87A-205ENST00000562946 ABCA10Q8WWZ4 1543 aa15.39■□□□□ 0.05
TMEM87A-205ENST00000562946 PBRM1Q86U86 1689 aa15.36■□□□□ 0.05
TMEM87A-205ENST00000562946 ABCA5Q8WWZ7 1642 aa15.35■□□□□ 0.05
TMEM87A-205ENST00000562946 GRIN2BQ13224 1484 aa15.34■□□□□ 0.05
TMEM87A-205ENST00000562946 GAPVD1Q14C86 1478 aa15.34■□□□□ 0.05
TMEM87A-205ENST00000562946 SNAPC4Q5SXM2 1469 aa15.34■□□□□ 0.05
TMEM87A-205ENST00000562946 MAGI1Q96QZ7 1491 aaPredicted RBP15.32■□□□□ 0.04
TMEM87A-205ENST00000562946 FBLN2P98095 1184 aa15.3■□□□□ 0.04
TMEM87A-205ENST00000562946 SYNJ2O15056 1496 aa15.26■□□□□ 0.03
TMEM87A-205ENST00000562946 CHMP7Q8WUX9 453 aaPredicted RBP15.25■□□□□ 0.03
TMEM87A-205ENST00000562946 RIMBP3CA6NJZ7 1639 aa15.24■□□□□ 0.03
TMEM87A-205ENST00000562946 RIMBP3BA6NNM3 1639 aa15.24■□□□□ 0.03
TMEM87A-205ENST00000562946 RIMBP3Q9UFD9 1639 aa15.24■□□□□ 0.03
TMEM87A-205ENST00000562946 ARHGEF11O15085 1522 aa15.21■□□□□ 0.03
TMEM87A-205ENST00000562946 ERICH3Q5RHP9 1530 aa15.21■□□□□ 0.03
TMEM87A-205ENST00000562946 ADAMTS12P58397 1594 aa15.2■□□□□ 0.02
TMEM87A-205ENST00000562946 CLASP1Q7Z460 1538 aa15.19■□□□□ 0.02
TMEM87A-205ENST00000562946 TRIM41Q8WV44 630 aa15.17■□□□□ 0.02
TMEM87A-205ENST00000562946 GRIN2AQ12879 1464 aa15.16■□□□□ 0.02
TMEM87A-205ENST00000562946 FHAD1B1AJZ9 1412 aa15.15■□□□□ 0.02
TMEM87A-205ENST00000562946 NUP160Q12769 1436 aa15.11■□□□□ 0.01
TMEM87A-205ENST00000562946 KIF27Q86VH2 1401 aa15.11■□□□□ 0.01
TMEM87A-205ENST00000562946 CEP170Q5SW79 1584 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms