RNA–Protein interactions for RNA: ENST00000562913.5

KLHDC4-210, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-210ENST00000562913 NISCHQ9Y2I1 1504 aa40.64■■■■■ 4.1
KLHDC4-210ENST00000562913 CCDC180Q9P1Z9 1646 aa36.33■■■■□ 3.41
KLHDC4-210ENST00000562913 ABCC9O60706 1549 aa36.07■■■■□ 3.36
KLHDC4-210ENST00000562913 RB1CC1Q8TDY2 1594 aa34.44■■■■□ 3.1
KLHDC4-210ENST00000562913 NACADO15069 1562 aa34.27■■■■□ 3.08
KLHDC4-210ENST00000562913 DCAF8L2P0C7V8 631 aa34.22■■■■□ 3.07
KLHDC4-210ENST00000562913 MYO15BQ96JP2 1530 aa33.87■■■■□ 3.01
KLHDC4-210ENST00000562913 ZCCHC6Q5VYS8 1495 aaKnown RBP33.75■■■□□ 2.99
KLHDC4-210ENST00000562913 UNC13AQ9UPW8 1703 aa33.69■■■□□ 2.98
KLHDC4-210ENST00000562913 PABPN1Q86U42 306 aaKnown RBP eCLIP33.64■■■□□ 2.98
KLHDC4-210ENST00000562913 DNAJC5BQ9UF47 199 aa33.56■■■□□ 2.96
KLHDC4-210ENST00000562913 DCAF1Q9Y4B6 1507 aa33.56■■■□□ 2.96
KLHDC4-210ENST00000562913 BICRAQ9NZM4 1560 aa33.43■■■□□ 2.94
KLHDC4-210ENST00000562913 SCRIBQ14160 1630 aa33.17■■■□□ 2.9
KLHDC4-210ENST00000562913 SHROOM4Q9ULL8 1493 aa32.97■■■□□ 2.87
KLHDC4-210ENST00000562913 CC2D2AQ9P2K1 1620 aa32.59■■■□□ 2.81
KLHDC4-210ENST00000562913 EIF4G1Q04637 1599 aaKnown RBP32.58■■■□□ 2.81
KLHDC4-210ENST00000562913 CECR2Q9BXF3 1484 aa32.44■■■□□ 2.78
KLHDC4-210ENST00000562913 SMARCA4P51532 1647 aa31.65■■■□□ 2.66
KLHDC4-210ENST00000562913 NCAPD3P42695 1498 aa31.63■■■□□ 2.65
KLHDC4-210ENST00000562913 ATAD2BQ9ULI0 1458 aa31.59■■■□□ 2.65
KLHDC4-210ENST00000562913 BAZ1AQ9NRL2 1556 aaPredicted RBP31.52■■■□□ 2.64
KLHDC4-210ENST00000562913 SMARCA2P51531 1590 aa31.51■■■□□ 2.64
KLHDC4-210ENST00000562913 HMGXB3Q12766 1538 aa31.43■■■□□ 2.62
KLHDC4-210ENST00000562913 MROH2BQ7Z745 1585 aa31.34■■■□□ 2.61
KLHDC4-210ENST00000562913 PEG3Q9GZU2 1588 aa31.31■■■□□ 2.6
KLHDC4-210ENST00000562913 BAZ1BQ9UIG0 1483 aaKnown RBP31.31■■■□□ 2.6
KLHDC4-210ENST00000562913 ERCC6Q03468 1493 aa31.11■■■□□ 2.57
KLHDC4-210ENST00000562913 NESP48681 1621 aa31.08■■■□□ 2.57
KLHDC4-210ENST00000562913 WIZO95785 1651 aa30.99■■■□□ 2.55
KLHDC4-210ENST00000562913 CUX2O14529 1486 aa30.92■■■□□ 2.54
KLHDC4-210ENST00000562913 LAMC3Q9Y6N6 1575 aa30.88■■■□□ 2.53
KLHDC4-210ENST00000562913 RSF1Q96T23 1441 aaPredicted RBP30.79■■■□□ 2.52
KLHDC4-210ENST00000562913 CADPSQ9ULU8 1353 aa30.69■■■□□ 2.5
KLHDC4-210ENST00000562913 KIF21AQ7Z4S6 1674 aa30.68■■■□□ 2.5
KLHDC4-210ENST00000562913 THOC2Q8NI27 1593 aaKnown RBP30.68■■■□□ 2.5
KLHDC4-210ENST00000562913 PDS5BQ9NTI5 1447 aa30.68■■■□□ 2.5
KLHDC4-210ENST00000562913 TOP2AP11388 1531 aaKnown RBP30.59■■■□□ 2.49
KLHDC4-210ENST00000562913 DNAJC5Q9H3Z4 198 aa30.57■■■□□ 2.48
KLHDC4-210ENST00000562913 MRC2Q9UBG0 1479 aa30.41■■■□□ 2.46
KLHDC4-210ENST00000562913 CFTRP13569 1480 aa30.4■■■□□ 2.46
KLHDC4-210ENST00000562913 CEP164Q9UPV0 1460 aa30.36■■■□□ 2.45
KLHDC4-210ENST00000562913 FANCD2Q9BXW9 1451 aa30.35■■■□□ 2.45
KLHDC4-210ENST00000562913 WDR62O43379 1518 aa30.32■■■□□ 2.44
KLHDC4-210ENST00000562913 CCDC88BA6NC98 1476 aa30.25■■■□□ 2.43
KLHDC4-210ENST00000562913 PRDM2Q13029 1718 aa30.14■■■□□ 2.42
KLHDC4-210ENST00000562913 URB2Q14146 1524 aaKnown RBP30.09■■■□□ 2.41
KLHDC4-210ENST00000562913 TOPBP1Q92547 1522 aa29.81■■■□□ 2.36
KLHDC4-210ENST00000562913 ABCC8Q09428 1581 aa29.74■■■□□ 2.35
KLHDC4-210ENST00000562913 IFT140Q96RY7 1462 aa29.73■■■□□ 2.35
KLHDC4-210ENST00000562913 DNMBPQ6XZF7 1577 aa29.73■■■□□ 2.35
KLHDC4-210ENST00000562913 SUPT5HO00267 1087 aaKnown RBP29.69■■■□□ 2.34
KLHDC4-210ENST00000562913 ZNF608Q9ULD9 1512 aaPredicted RBP29.68■■■□□ 2.34
KLHDC4-210ENST00000562913 OSCARQ8IYS5 282 aa29.58■■■□□ 2.33
KLHDC4-210ENST00000562913 TARBP1Q13395 1621 aaKnown RBP29.53■■■□□ 2.32
KLHDC4-210ENST00000562913 POLA1P09884 1462 aaPredicted RBP29.53■■■□□ 2.32
KLHDC4-210ENST00000562913 EIF4G3O43432 1585 aaKnown RBP29.52■■■□□ 2.32
KLHDC4-210ENST00000562913 AQRO60306 1485 aaKnown RBP eCLIP29.45■■■□□ 2.31
KLHDC4-210ENST00000562913 RAD54L2Q9Y4B4 1467 aa29.43■■■□□ 2.3
KLHDC4-210ENST00000562913 CUX1P39880 1505 aa29.42■■■□□ 2.3
KLHDC4-210ENST00000562913 SOGA1O94964 1423 aa29.4■■■□□ 2.3
KLHDC4-210ENST00000562913 FGD5Q6ZNL6 1462 aa29.4■■■□□ 2.3
KLHDC4-210ENST00000562913 TRIM41Q8WV44 630 aa29.39■■■□□ 2.3
KLHDC4-210ENST00000562913 TDRD9Q8NDG6 1382 aaKnown RBP29.32■■■□□ 2.28
KLHDC4-210ENST00000562913 CHD1O14646 1710 aa29.26■■■□□ 2.27
KLHDC4-210ENST00000562913 WDR97A6NE52 1622 aa29.22■■■□□ 2.27
KLHDC4-210ENST00000562913 FBLN2P98095 1184 aa29.21■■■□□ 2.27
KLHDC4-210ENST00000562913 RIMBP3CA6NJZ7 1639 aa29.17■■■□□ 2.26
KLHDC4-210ENST00000562913 RIMBP3BA6NNM3 1639 aa29.17■■■□□ 2.26
KLHDC4-210ENST00000562913 RIMBP3Q9UFD9 1639 aa29.17■■■□□ 2.26
KLHDC4-210ENST00000562913 SNAPC4Q5SXM2 1469 aa29.15■■■□□ 2.26
KLHDC4-210ENST00000562913 GRIN2BQ13224 1484 aa29.1■■■□□ 2.25
KLHDC4-210ENST00000562913 ARHGEF11O15085 1522 aa29.1■■■□□ 2.25
KLHDC4-210ENST00000562913 MAGI1Q96QZ7 1491 aaPredicted RBP29.07■■■□□ 2.24
KLHDC4-210ENST00000562913 ABCA10Q8WWZ4 1543 aa29.06■■■□□ 2.24
KLHDC4-210ENST00000562913 GAPVD1Q14C86 1478 aa29.05■■■□□ 2.24
KLHDC4-210ENST00000562913 WRNQ14191 1432 aaPredicted RBP eCLIP29.03■■■□□ 2.24
KLHDC4-210ENST00000562913 PBRM1Q86U86 1689 aa29.03■■■□□ 2.24
KLHDC4-210ENST00000562913 TOP2BQ02880 1626 aa29.02■■■□□ 2.24
KLHDC4-210ENST00000562913 BIVM-ERCC5R4GMW8 1640 aa29.02■■■□□ 2.24
KLHDC4-210ENST00000562913 SYNJ1O43426 1573 aa29.02■■■□□ 2.24
KLHDC4-210ENST00000562913 CHMP7Q8WUX9 453 aaPredicted RBP29.02■■■□□ 2.24
KLHDC4-210ENST00000562913 ABCA5Q8WWZ7 1642 aa29.01■■■□□ 2.23
KLHDC4-210ENST00000562913 SYNJ2O15056 1496 aa28.97■■■□□ 2.23
KLHDC4-210ENST00000562913 CLASP1Q7Z460 1538 aa28.9■■■□□ 2.22
KLHDC4-210ENST00000562913 CYB5RLQ6IPT4 315 aa28.89■■■□□ 2.22
KLHDC4-210ENST00000562913 ARAP1Q96P48 1450 aa28.85■■■□□ 2.21
KLHDC4-210ENST00000562913 ADAMTS12P58397 1594 aa28.76■■■□□ 2.19
KLHDC4-210ENST00000562913 GRIN2AQ12879 1464 aa28.73■■■□□ 2.19
KLHDC4-210ENST00000562913 ERICH3Q5RHP9 1530 aa28.7■■■□□ 2.19
KLHDC4-210ENST00000562913 FHAD1B1AJZ9 1412 aa28.69■■■□□ 2.18
KLHDC4-210ENST00000562913 CEP170Q5SW79 1584 aa28.63■■■□□ 2.17
KLHDC4-210ENST00000562913 NUP160Q12769 1436 aa28.61■■■□□ 2.17
KLHDC4-210ENST00000562913 ERCC6L2Q5T890 1561 aa28.51■■■□□ 2.15
KLHDC4-210ENST00000562913 TRHP20396 242 aaPredicted RBP28.47■■■□□ 2.15
KLHDC4-210ENST00000562913 KIF27Q86VH2 1401 aa28.46■■■□□ 2.15
KLHDC4-210ENST00000562913 SHROOM2Q13796 1616 aa28.46■■■□□ 2.15
KLHDC4-210ENST00000562913 IGF1RP08069 1367 aa28.42■■■□□ 2.14
KLHDC4-210ENST00000562913 CUL7Q14999 1698 aa28.35■■■□□ 2.13
KLHDC4-210ENST00000562913 RUSC2Q8N2Y8 1516 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 169 ms