RNA–Protein interactions for RNA: ENST00000562890.1

SCAPER-204, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 3

Gene SCAPER, Length 671 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-204ENST00000562890 NISCHQ9Y2I1 1504 aa16.5■□□□□ 0.23
SCAPER-204ENST00000562890 AEBP2Q6ZN18 517 aaPredicted RBP15.28■□□□□ 0.04
SCAPER-204ENST00000562890 CCDC180Q9P1Z9 1646 aa14.67□□□□□ -0.06
SCAPER-204ENST00000562890 CHIC1Q5VXU3 224 aa14.67□□□□□ -0.06
SCAPER-204ENST00000562890 ABCC9O60706 1549 aa14.42□□□□□ -0.1
SCAPER-204ENST00000562890 RB1CC1Q8TDY2 1594 aa13.84□□□□□ -0.19
SCAPER-204ENST00000562890 NACADO15069 1562 aa13.83□□□□□ -0.19
SCAPER-204ENST00000562890 DCAF8L2P0C7V8 631 aa13.81□□□□□ -0.2
SCAPER-204ENST00000562890 MYO15BQ96JP2 1530 aa13.74□□□□□ -0.21
SCAPER-204ENST00000562890 ZCCHC6Q5VYS8 1495 aaKnown RBP13.7□□□□□ -0.22
SCAPER-204ENST00000562890 DCAF1Q9Y4B6 1507 aa13.65□□□□□ -0.22
SCAPER-204ENST00000562890 UNC13AQ9UPW8 1703 aa13.59□□□□□ -0.23
SCAPER-204ENST00000562890 PABPN1Q86U42 306 aaKnown RBP eCLIP13.5□□□□□ -0.25
SCAPER-204ENST00000562890 BICRAQ9NZM4 1560 aa13.47□□□□□ -0.25
SCAPER-204ENST00000562890 DNAJC5BQ9UF47 199 aa13.41□□□□□ -0.26
SCAPER-204ENST00000562890 SCRIBQ14160 1630 aa13.35□□□□□ -0.27
SCAPER-204ENST00000562890 SHROOM4Q9ULL8 1493 aa13.26□□□□□ -0.29
SCAPER-204ENST00000562890 EIF4G1Q04637 1599 aaKnown RBP13.09□□□□□ -0.31
SCAPER-204ENST00000562890 CC2D2AQ9P2K1 1620 aa13.06□□□□□ -0.32
SCAPER-204ENST00000562890 SENP3Q9H4L4 574 aaPredicted RBP12.98□□□□□ -0.33
SCAPER-204ENST00000562890 CECR2Q9BXF3 1484 aa12.97□□□□□ -0.33
SCAPER-204ENST00000562890 PHF23Q9BUL5 403 aaPredicted RBP12.89□□□□□ -0.35
SCAPER-204ENST00000562890 SMARCA4P51532 1647 aa12.8□□□□□ -0.36
SCAPER-204ENST00000562890 NCAPD3P42695 1498 aa12.79□□□□□ -0.36
SCAPER-204ENST00000562890 ATAD2BQ9ULI0 1458 aa12.77□□□□□ -0.37
SCAPER-204ENST00000562890 BAZ1AQ9NRL2 1556 aaPredicted RBP12.77□□□□□ -0.37
SCAPER-204ENST00000562890 SMARCA2P51531 1590 aa12.72□□□□□ -0.37
SCAPER-204ENST00000562890 MROH2BQ7Z745 1585 aa12.72□□□□□ -0.37
SCAPER-204ENST00000562890 PEG3Q9GZU2 1588 aa12.7□□□□□ -0.38
SCAPER-204ENST00000562890 HMGXB3Q12766 1538 aa12.67□□□□□ -0.38
SCAPER-204ENST00000562890 BAZ1BQ9UIG0 1483 aaKnown RBP12.61□□□□□ -0.39
SCAPER-204ENST00000562890 WIZO95785 1651 aa12.58□□□□□ -0.4
SCAPER-204ENST00000562890 RSF1Q96T23 1441 aaPredicted RBP12.54□□□□□ -0.4
SCAPER-204ENST00000562890 NESP48681 1621 aa12.48□□□□□ -0.41
SCAPER-204ENST00000562890 LAMC3Q9Y6N6 1575 aa12.43□□□□□ -0.42
SCAPER-204ENST00000562890 CADPSQ9ULU8 1353 aa12.41□□□□□ -0.42
SCAPER-204ENST00000562890 TOP2AP11388 1531 aaKnown RBP12.4□□□□□ -0.42
SCAPER-204ENST00000562890 ERCC6Q03468 1493 aa12.4□□□□□ -0.43
SCAPER-204ENST00000562890 PDS5BQ9NTI5 1447 aa12.35□□□□□ -0.43
SCAPER-204ENST00000562890 CUX2O14529 1486 aa12.34□□□□□ -0.43
SCAPER-204ENST00000562890 KIF21AQ7Z4S6 1674 aa12.32□□□□□ -0.44
SCAPER-204ENST00000562890 CFTRP13569 1480 aa12.31□□□□□ -0.44
SCAPER-204ENST00000562890 CCDC88BA6NC98 1476 aa12.3□□□□□ -0.44
SCAPER-204ENST00000562890 THOC2Q8NI27 1593 aaKnown RBP12.29□□□□□ -0.44
SCAPER-204ENST00000562890 FANCD2Q9BXW9 1451 aa12.22□□□□□ -0.45
SCAPER-204ENST00000562890 MRC2Q9UBG0 1479 aa12.21□□□□□ -0.46
SCAPER-204ENST00000562890 CEP164Q9UPV0 1460 aa12.2□□□□□ -0.46
SCAPER-204ENST00000562890 PRDM2Q13029 1718 aa12.2□□□□□ -0.46
SCAPER-204ENST00000562890 WDR62O43379 1518 aa12.18□□□□□ -0.46
SCAPER-204ENST00000562890 SUPT5HO00267 1087 aaKnown RBP12.16□□□□□ -0.46
SCAPER-204ENST00000562890 URB2Q14146 1524 aaKnown RBP12.12□□□□□ -0.47
SCAPER-204ENST00000562890 DNAJC5Q9H3Z4 198 aa12.12□□□□□ -0.47
SCAPER-204ENST00000562890 FOXD1Q16676 465 aa12.1□□□□□ -0.47
SCAPER-204ENST00000562890 ABCC8Q09428 1581 aa12.04□□□□□ -0.48
SCAPER-204ENST00000562890 TOPBP1Q92547 1522 aa12.03□□□□□ -0.48
SCAPER-204ENST00000562890 DNMBPQ6XZF7 1577 aa12□□□□□ -0.49
SCAPER-204ENST00000562890 IFT140Q96RY7 1462 aa11.96□□□□□ -0.49
SCAPER-204ENST00000562890 ZNF608Q9ULD9 1512 aaPredicted RBP11.93□□□□□ -0.5
SCAPER-204ENST00000562890 TARBP1Q13395 1621 aaKnown RBP11.93□□□□□ -0.5
SCAPER-204ENST00000562890 POLA1P09884 1462 aaPredicted RBP11.92□□□□□ -0.5
SCAPER-204ENST00000562890 CUX1P39880 1505 aa11.91□□□□□ -0.5
SCAPER-204ENST00000562890 SOGA1O94964 1423 aa11.9□□□□□ -0.5
SCAPER-204ENST00000562890 RAD54L2Q9Y4B4 1467 aa11.89□□□□□ -0.51
SCAPER-204ENST00000562890 FGD5Q6ZNL6 1462 aa11.88□□□□□ -0.51
SCAPER-204ENST00000562890 AQRO60306 1485 aaKnown RBP eCLIP11.87□□□□□ -0.51
SCAPER-204ENST00000562890 OSCARQ8IYS5 282 aa11.86□□□□□ -0.51
SCAPER-204ENST00000562890 EIF4G3O43432 1585 aaKnown RBP11.84□□□□□ -0.51
SCAPER-204ENST00000562890 TDRD9Q8NDG6 1382 aaKnown RBP11.83□□□□□ -0.52
SCAPER-204ENST00000562890 WRNQ14191 1432 aaPredicted RBP eCLIP11.8□□□□□ -0.52
SCAPER-204ENST00000562890 WDR97A6NE52 1622 aa11.8□□□□□ -0.52
SCAPER-204ENST00000562890 BIVM-ERCC5R4GMW8 1640 aa11.8□□□□□ -0.52
SCAPER-204ENST00000562890 PLPPR3Q6T4P5 718 aa11.8□□□□□ -0.52
SCAPER-204ENST00000562890 TOP2BQ02880 1626 aa11.79□□□□□ -0.52
SCAPER-204ENST00000562890 SYNJ1O43426 1573 aa11.78□□□□□ -0.52
SCAPER-204ENST00000562890 ABCA10Q8WWZ4 1543 aa11.77□□□□□ -0.52
SCAPER-204ENST00000562890 GRIN2BQ13224 1484 aa11.74□□□□□ -0.53
SCAPER-204ENST00000562890 CHD1O14646 1710 aa11.74□□□□□ -0.53
SCAPER-204ENST00000562890 GAPVD1Q14C86 1478 aa11.73□□□□□ -0.53
SCAPER-204ENST00000562890 ABCA5Q8WWZ7 1642 aa11.72□□□□□ -0.53
SCAPER-204ENST00000562890 FBLN2P98095 1184 aa11.72□□□□□ -0.53
SCAPER-204ENST00000562890 SNAPC4Q5SXM2 1469 aa11.71□□□□□ -0.53
SCAPER-204ENST00000562890 PBRM1Q86U86 1689 aa11.71□□□□□ -0.54
SCAPER-204ENST00000562890 MAGI1Q96QZ7 1491 aaPredicted RBP11.7□□□□□ -0.54
SCAPER-204ENST00000562890 CHMP7Q8WUX9 453 aaPredicted RBP11.69□□□□□ -0.54
SCAPER-204ENST00000562890 SYNJ2O15056 1496 aa11.67□□□□□ -0.54
SCAPER-204ENST00000562890 RIMBP3CA6NJZ7 1639 aa11.64□□□□□ -0.55
SCAPER-204ENST00000562890 RIMBP3BA6NNM3 1639 aa11.64□□□□□ -0.55
SCAPER-204ENST00000562890 RIMBP3Q9UFD9 1639 aa11.64□□□□□ -0.55
SCAPER-204ENST00000562890 ERICH3Q5RHP9 1530 aa11.62□□□□□ -0.55
SCAPER-204ENST00000562890 ARHGEF11O15085 1522 aa11.61□□□□□ -0.55
SCAPER-204ENST00000562890 CLASP1Q7Z460 1538 aa11.61□□□□□ -0.55
SCAPER-204ENST00000562890 TRIM41Q8WV44 630 aa11.61□□□□□ -0.55
SCAPER-204ENST00000562890 FHAD1B1AJZ9 1412 aa11.6□□□□□ -0.55
SCAPER-204ENST00000562890 ADAMTS12P58397 1594 aa11.58□□□□□ -0.55
SCAPER-204ENST00000562890 GRIN2AQ12879 1464 aa11.58□□□□□ -0.56
SCAPER-204ENST00000562890 IGF1RP08069 1367 aa11.58□□□□□ -0.56
SCAPER-204ENST00000562890 CYB5RLQ6IPT4 315 aa11.56□□□□□ -0.56
SCAPER-204ENST00000562890 KIF27Q86VH2 1401 aa11.56□□□□□ -0.56
SCAPER-204ENST00000562890 NUP160Q12769 1436 aa11.55□□□□□ -0.56
SCAPER-204ENST00000562890 CEP170Q5SW79 1584 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms