RNA–Protein interactions for RNA: ENST00000562829.1

TNRC6A-209, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 277 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-209ENST00000562829 NISCHQ9Y2I1 1504 aa41.61■■■■■ 4.25
TNRC6A-209ENST00000562829 CCDC180Q9P1Z9 1646 aa37.25■■■■□ 3.55
TNRC6A-209ENST00000562829 ABCC9O60706 1549 aa37.07■■■■□ 3.53
TNRC6A-209ENST00000562829 RB1CC1Q8TDY2 1594 aa35.37■■■■□ 3.25
TNRC6A-209ENST00000562829 NACADO15069 1562 aa35.16■■■■□ 3.22
TNRC6A-209ENST00000562829 DCAF8L2P0C7V8 631 aa35.12■■■■□ 3.21
TNRC6A-209ENST00000562829 MYO15BQ96JP2 1530 aa34.71■■■■□ 3.15
TNRC6A-209ENST00000562829 UNC13AQ9UPW8 1703 aa34.56■■■■□ 3.12
TNRC6A-209ENST00000562829 ZCCHC6Q5VYS8 1495 aaKnown RBP34.55■■■■□ 3.12
TNRC6A-209ENST00000562829 PABPN1Q86U42 306 aaKnown RBP eCLIP34.53■■■■□ 3.12
TNRC6A-209ENST00000562829 DNAJC5BQ9UF47 199 aa34.47■■■■□ 3.11
TNRC6A-209ENST00000562829 DCAF1Q9Y4B6 1507 aa34.35■■■■□ 3.09
TNRC6A-209ENST00000562829 BICRAQ9NZM4 1560 aa34.28■■■■□ 3.08
TNRC6A-209ENST00000562829 SCRIBQ14160 1630 aa34.01■■■■□ 3.04
TNRC6A-209ENST00000562829 SHROOM4Q9ULL8 1493 aa33.85■■■■□ 3.01
TNRC6A-209ENST00000562829 CC2D2AQ9P2K1 1620 aa33.48■■■□□ 2.95
TNRC6A-209ENST00000562829 EIF4G1Q04637 1599 aaKnown RBP33.46■■■□□ 2.95
TNRC6A-209ENST00000562829 CECR2Q9BXF3 1484 aa33.35■■■□□ 2.93
TNRC6A-209ENST00000562829 SMARCA4P51532 1647 aa32.44■■■□□ 2.78
TNRC6A-209ENST00000562829 NCAPD3P42695 1498 aa32.42■■■□□ 2.78
TNRC6A-209ENST00000562829 ATAD2BQ9ULI0 1458 aa32.39■■■□□ 2.78
TNRC6A-209ENST00000562829 SMARCA2P51531 1590 aa32.33■■■□□ 2.77
TNRC6A-209ENST00000562829 BAZ1AQ9NRL2 1556 aaPredicted RBP32.32■■■□□ 2.76
TNRC6A-209ENST00000562829 HMGXB3Q12766 1538 aa32.24■■■□□ 2.75
TNRC6A-209ENST00000562829 BAZ1BQ9UIG0 1483 aaKnown RBP32.13■■■□□ 2.73
TNRC6A-209ENST00000562829 MROH2BQ7Z745 1585 aa32.08■■■□□ 2.73
TNRC6A-209ENST00000562829 PEG3Q9GZU2 1588 aa32.07■■■□□ 2.72
TNRC6A-209ENST00000562829 ERCC6Q03468 1493 aa32.02■■■□□ 2.72
TNRC6A-209ENST00000562829 NESP48681 1621 aa31.89■■■□□ 2.7
TNRC6A-209ENST00000562829 CUX2O14529 1486 aa31.82■■■□□ 2.68
TNRC6A-209ENST00000562829 WIZO95785 1651 aa31.73■■■□□ 2.67
TNRC6A-209ENST00000562829 LAMC3Q9Y6N6 1575 aa31.7■■■□□ 2.67
TNRC6A-209ENST00000562829 THOC2Q8NI27 1593 aaKnown RBP31.51■■■□□ 2.64
TNRC6A-209ENST00000562829 PDS5BQ9NTI5 1447 aa31.51■■■□□ 2.64
TNRC6A-209ENST00000562829 KIF21AQ7Z4S6 1674 aa31.51■■■□□ 2.63
TNRC6A-209ENST00000562829 DNAJC5Q9H3Z4 198 aa31.49■■■□□ 2.63
TNRC6A-209ENST00000562829 RSF1Q96T23 1441 aaPredicted RBP31.49■■■□□ 2.63
TNRC6A-209ENST00000562829 CADPSQ9ULU8 1353 aa31.47■■■□□ 2.63
TNRC6A-209ENST00000562829 TOP2AP11388 1531 aaKnown RBP31.34■■■□□ 2.61
TNRC6A-209ENST00000562829 MRC2Q9UBG0 1479 aa31.23■■■□□ 2.59
TNRC6A-209ENST00000562829 CEP164Q9UPV0 1460 aa31.18■■■□□ 2.58
TNRC6A-209ENST00000562829 CFTRP13569 1480 aa31.15■■■□□ 2.58
TNRC6A-209ENST00000562829 FANCD2Q9BXW9 1451 aa31.15■■■□□ 2.58
TNRC6A-209ENST00000562829 WDR62O43379 1518 aa31.14■■■□□ 2.57
TNRC6A-209ENST00000562829 CCDC88BA6NC98 1476 aa30.96■■■□□ 2.55
TNRC6A-209ENST00000562829 PRDM2Q13029 1718 aa30.92■■■□□ 2.54
TNRC6A-209ENST00000562829 URB2Q14146 1524 aaKnown RBP30.86■■■□□ 2.53
TNRC6A-209ENST00000562829 TOPBP1Q92547 1522 aa30.58■■■□□ 2.49
TNRC6A-209ENST00000562829 IFT140Q96RY7 1462 aa30.52■■■□□ 2.48
TNRC6A-209ENST00000562829 ABCC8Q09428 1581 aa30.52■■■□□ 2.48
TNRC6A-209ENST00000562829 DNMBPQ6XZF7 1577 aa30.49■■■□□ 2.47
TNRC6A-209ENST00000562829 ZNF608Q9ULD9 1512 aaPredicted RBP30.44■■■□□ 2.46
TNRC6A-209ENST00000562829 OSCARQ8IYS5 282 aa30.4■■■□□ 2.46
TNRC6A-209ENST00000562829 SUPT5HO00267 1087 aaKnown RBP30.36■■■□□ 2.45
TNRC6A-209ENST00000562829 TRIM41Q8WV44 630 aa30.32■■■□□ 2.44
TNRC6A-209ENST00000562829 EIF4G3O43432 1585 aaKnown RBP30.32■■■□□ 2.44
TNRC6A-209ENST00000562829 POLA1P09884 1462 aaPredicted RBP30.28■■■□□ 2.44
TNRC6A-209ENST00000562829 TARBP1Q13395 1621 aaKnown RBP30.26■■■□□ 2.44
TNRC6A-209ENST00000562829 AQRO60306 1485 aaKnown RBP eCLIP30.2■■■□□ 2.431e-13■■■■■ 72.1
TNRC6A-209ENST00000562829 RAD54L2Q9Y4B4 1467 aa30.18■■■□□ 2.42
TNRC6A-209ENST00000562829 SOGA1O94964 1423 aa30.15■■■□□ 2.42
TNRC6A-209ENST00000562829 FGD5Q6ZNL6 1462 aa30.14■■■□□ 2.42
TNRC6A-209ENST00000562829 CUX1P39880 1505 aa30.13■■■□□ 2.41
TNRC6A-209ENST00000562829 TDRD9Q8NDG6 1382 aaKnown RBP30.06■■■□□ 2.4
TNRC6A-209ENST00000562829 CHD1O14646 1710 aa30.05■■■□□ 2.4
TNRC6A-209ENST00000562829 FBLN2P98095 1184 aa30.02■■■□□ 2.4
TNRC6A-209ENST00000562829 RIMBP3CA6NJZ7 1639 aa30■■■□□ 2.39
TNRC6A-209ENST00000562829 RIMBP3BA6NNM3 1639 aa30■■■□□ 2.39
TNRC6A-209ENST00000562829 RIMBP3Q9UFD9 1639 aa30■■■□□ 2.39
TNRC6A-209ENST00000562829 WDR97A6NE52 1622 aa29.99■■■□□ 2.39
TNRC6A-209ENST00000562829 ARHGEF11O15085 1522 aa29.93■■■□□ 2.38
TNRC6A-209ENST00000562829 SNAPC4Q5SXM2 1469 aa29.93■■■□□ 2.38
TNRC6A-209ENST00000562829 GRIN2BQ13224 1484 aa29.87■■■□□ 2.37
TNRC6A-209ENST00000562829 MAGI1Q96QZ7 1491 aaPredicted RBP29.84■■■□□ 2.37
TNRC6A-209ENST00000562829 CHMP7Q8WUX9 453 aaPredicted RBP29.81■■■□□ 2.36
TNRC6A-209ENST00000562829 GAPVD1Q14C86 1478 aa29.8■■■□□ 2.36
TNRC6A-209ENST00000562829 PBRM1Q86U86 1689 aa29.79■■■□□ 2.36
TNRC6A-209ENST00000562829 ABCA10Q8WWZ4 1543 aa29.79■■■□□ 2.36
TNRC6A-209ENST00000562829 WRNQ14191 1432 aaPredicted RBP eCLIP29.74■■■□□ 2.35
TNRC6A-209ENST00000562829 SYNJ2O15056 1496 aa29.74■■■□□ 2.35
TNRC6A-209ENST00000562829 ABCA5Q8WWZ7 1642 aa29.73■■■□□ 2.35
TNRC6A-209ENST00000562829 SYNJ1O43426 1573 aa29.73■■■□□ 2.35
TNRC6A-209ENST00000562829 BIVM-ERCC5R4GMW8 1640 aa29.72■■■□□ 2.35
TNRC6A-209ENST00000562829 TOP2BQ02880 1626 aa29.71■■■□□ 2.35
TNRC6A-209ENST00000562829 CYB5RLQ6IPT4 315 aa29.71■■■□□ 2.35
TNRC6A-209ENST00000562829 CLASP1Q7Z460 1538 aa29.67■■■□□ 2.34
TNRC6A-209ENST00000562829 ARAP1Q96P48 1450 aa29.65■■■□□ 2.34
TNRC6A-209ENST00000562829 ADAMTS12P58397 1594 aa29.51■■■□□ 2.31
TNRC6A-209ENST00000562829 GRIN2AQ12879 1464 aa29.48■■■□□ 2.31
TNRC6A-209ENST00000562829 ERICH3Q5RHP9 1530 aa29.42■■■□□ 2.3
TNRC6A-209ENST00000562829 FHAD1B1AJZ9 1412 aa29.42■■■□□ 2.3
TNRC6A-209ENST00000562829 CEP170Q5SW79 1584 aa29.36■■■□□ 2.29
TNRC6A-209ENST00000562829 TRHP20396 242 aaPredicted RBP29.35■■■□□ 2.29
TNRC6A-209ENST00000562829 NUP160Q12769 1436 aa29.35■■■□□ 2.29
TNRC6A-209ENST00000562829 ERCC6L2Q5T890 1561 aa29.24■■■□□ 2.27
TNRC6A-209ENST00000562829 SHROOM2Q13796 1616 aa29.19■■■□□ 2.26
TNRC6A-209ENST00000562829 KIF27Q86VH2 1401 aa29.17■■■□□ 2.26
TNRC6A-209ENST00000562829 RUSC2Q8N2Y8 1516 aa29.09■■■□□ 2.25
TNRC6A-209ENST00000562829 PRG4Q92954 1404 aaPredicted RBP29.08■■■□□ 2.25
TNRC6A-209ENST00000562829 IGF1RP08069 1367 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms