RNA–Protein interactions for RNA: ENST00000562828.5

CMC2-205, Transcript of C-X9-C motif containing 2, humanhuman

TSL 2

Gene CMC2, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC2-205ENST00000562828 NISCHQ9Y2I1 1504 aa34.88■■■■□ 3.17
CMC2-205ENST00000562828 CCDC180Q9P1Z9 1646 aa31.13■■■□□ 2.57
CMC2-205ENST00000562828 ABCC9O60706 1549 aa30.4■■■□□ 2.46
CMC2-205ENST00000562828 RB1CC1Q8TDY2 1594 aa29.22■■■□□ 2.27
CMC2-205ENST00000562828 NACADO15069 1562 aa29.19■■■□□ 2.26
CMC2-205ENST00000562828 ZCCHC6Q5VYS8 1495 aaKnown RBP29.07■■■□□ 2.24
CMC2-205ENST00000562828 MYO15BQ96JP2 1530 aa29.04■■■□□ 2.24
CMC2-205ENST00000562828 DCAF1Q9Y4B6 1507 aa28.89■■■□□ 2.21
CMC2-205ENST00000562828 DCAF8L2P0C7V8 631 aa28.84■■■□□ 2.21
CMC2-205ENST00000562828 UNC13AQ9UPW8 1703 aa28.83■■■□□ 2.21
CMC2-205ENST00000562828 BICRAQ9NZM4 1560 aa28.53■■■□□ 2.16
CMC2-205ENST00000562828 PABPN1Q86U42 306 aaKnown RBP eCLIP28.33■■■□□ 2.13
CMC2-205ENST00000562828 SCRIBQ14160 1630 aa28.32■■■□□ 2.12
CMC2-205ENST00000562828 DNAJC5BQ9UF47 199 aa28.08■■■□□ 2.09
CMC2-205ENST00000562828 SHROOM4Q9ULL8 1493 aa28.06■■■□□ 2.08
CMC2-205ENST00000562828 EIF4G1Q04637 1599 aaKnown RBP27.67■■■□□ 2.02
CMC2-205ENST00000562828 CC2D2AQ9P2K1 1620 aa27.59■■■□□ 2.01
CMC2-205ENST00000562828 CECR2Q9BXF3 1484 aa27.32■■□□□ 1.96
CMC2-205ENST00000562828 SMARCA4P51532 1647 aa27.12■■□□□ 1.93
CMC2-205ENST00000562828 BAZ1AQ9NRL2 1556 aaPredicted RBP26.99■■□□□ 1.91
CMC2-205ENST00000562828 NCAPD3P42695 1498 aa26.94■■□□□ 1.9
CMC2-205ENST00000562828 ATAD2BQ9ULI0 1458 aa26.94■■□□□ 1.9
CMC2-205ENST00000562828 MROH2BQ7Z745 1585 aa26.92■■□□□ 1.9
CMC2-205ENST00000562828 PEG3Q9GZU2 1588 aa26.9■■□□□ 1.9
CMC2-205ENST00000562828 SMARCA2P51531 1590 aa26.87■■□□□ 1.89
CMC2-205ENST00000562828 HMGXB3Q12766 1538 aa26.83■■□□□ 1.89
CMC2-205ENST00000562828 WIZO95785 1651 aa26.64■■□□□ 1.86
CMC2-205ENST00000562828 BAZ1BQ9UIG0 1483 aaKnown RBP26.64■■□□□ 1.86
CMC2-205ENST00000562828 RSF1Q96T23 1441 aaPredicted RBP26.52■■□□□ 1.84
CMC2-205ENST00000562828 NESP48681 1621 aa26.36■■□□□ 1.81
CMC2-205ENST00000562828 TOP2AP11388 1531 aaKnown RBP26.29■■□□□ 1.8
CMC2-205ENST00000562828 LAMC3Q9Y6N6 1575 aa26.24■■□□□ 1.79
CMC2-205ENST00000562828 KIF21AQ7Z4S6 1674 aa26.12■■□□□ 1.77
CMC2-205ENST00000562828 ERCC6Q03468 1493 aa26.1■■□□□ 1.77
CMC2-205ENST00000562828 CADPSQ9ULU8 1353 aa26.08■■□□□ 1.77
CMC2-205ENST00000562828 THOC2Q8NI27 1593 aaKnown RBP26.06■■□□□ 1.76
CMC2-205ENST00000562828 CFTRP13569 1480 aa25.98■■□□□ 1.75
CMC2-205ENST00000562828 CCDC88BA6NC98 1476 aa25.97■■□□□ 1.75
CMC2-205ENST00000562828 CUX2O14529 1486 aa25.97■■□□□ 1.75
CMC2-205ENST00000562828 PDS5BQ9NTI5 1447 aa25.95■■□□□ 1.74
CMC2-205ENST00000562828 PRDM2Q13029 1718 aa25.93■■□□□ 1.74
CMC2-205ENST00000562828 FANCD2Q9BXW9 1451 aa25.81■■□□□ 1.72
CMC2-205ENST00000562828 MRC2Q9UBG0 1479 aa25.78■■□□□ 1.72
CMC2-205ENST00000562828 WDR62O43379 1518 aa25.78■■□□□ 1.72
CMC2-205ENST00000562828 CEP164Q9UPV0 1460 aa25.76■■□□□ 1.71
CMC2-205ENST00000562828 DNAJC5Q9H3Z4 198 aa25.75■■□□□ 1.71
CMC2-205ENST00000562828 URB2Q14146 1524 aaKnown RBP25.65■■□□□ 1.7
CMC2-205ENST00000562828 SUPT5HO00267 1087 aaKnown RBP25.55■■□□□ 1.68
CMC2-205ENST00000562828 TOPBP1Q92547 1522 aa25.43■■□□□ 1.66
CMC2-205ENST00000562828 DNMBPQ6XZF7 1577 aa25.39■■□□□ 1.66
CMC2-205ENST00000562828 ABCC8Q09428 1581 aa25.31■■□□□ 1.64
CMC2-205ENST00000562828 CUX1P39880 1505 aa25.26■■□□□ 1.63
CMC2-205ENST00000562828 TARBP1Q13395 1621 aaKnown RBP25.26■■□□□ 1.63
CMC2-205ENST00000562828 IFT140Q96RY7 1462 aa25.22■■□□□ 1.63
CMC2-205ENST00000562828 ZNF608Q9ULD9 1512 aaPredicted RBP25.21■■□□□ 1.63
CMC2-205ENST00000562828 POLA1P09884 1462 aaPredicted RBP25.21■■□□□ 1.63
CMC2-205ENST00000562828 EIF4G3O43432 1585 aaKnown RBP25.13■■□□□ 1.61
CMC2-205ENST00000562828 FGD5Q6ZNL6 1462 aa25.11■■□□□ 1.61
CMC2-205ENST00000562828 RAD54L2Q9Y4B4 1467 aa25.09■■□□□ 1.61
CMC2-205ENST00000562828 WDR97A6NE52 1622 aa25.08■■□□□ 1.61
CMC2-205ENST00000562828 BIVM-ERCC5R4GMW8 1640 aa25.04■■□□□ 1.6
CMC2-205ENST00000562828 SYNJ1O43426 1573 aa25.02■■□□□ 1.6
CMC2-205ENST00000562828 SOGA1O94964 1423 aa25.01■■□□□ 1.59
CMC2-205ENST00000562828 TOP2BQ02880 1626 aa25■■□□□ 1.59
CMC2-205ENST00000562828 AQRO60306 1485 aaKnown RBP eCLIP24.99■■□□□ 1.59
CMC2-205ENST00000562828 WRNQ14191 1432 aaPredicted RBP eCLIP24.93■■□□□ 1.58
CMC2-205ENST00000562828 TDRD9Q8NDG6 1382 aaKnown RBP24.89■■□□□ 1.57
CMC2-205ENST00000562828 CHD1O14646 1710 aa24.89■■□□□ 1.57
CMC2-205ENST00000562828 ABCA10Q8WWZ4 1543 aa24.88■■□□□ 1.57
CMC2-205ENST00000562828 ABCA5Q8WWZ7 1642 aa24.88■■□□□ 1.57
CMC2-205ENST00000562828 PBRM1Q86U86 1689 aa24.85■■□□□ 1.57
CMC2-205ENST00000562828 SNAPC4Q5SXM2 1469 aa24.77■■□□□ 1.56
CMC2-205ENST00000562828 GRIN2BQ13224 1484 aa24.75■■□□□ 1.55
CMC2-205ENST00000562828 GAPVD1Q14C86 1478 aa24.75■■□□□ 1.55
CMC2-205ENST00000562828 OSCARQ8IYS5 282 aa24.74■■□□□ 1.55
CMC2-205ENST00000562828 MAGI1Q96QZ7 1491 aaPredicted RBP24.72■■□□□ 1.55
CMC2-205ENST00000562828 SYNJ2O15056 1496 aa24.62■■□□□ 1.53
CMC2-205ENST00000562828 ADAMTS12P58397 1594 aa24.62■■□□□ 1.53
CMC2-205ENST00000562828 CLASP1Q7Z460 1538 aa24.6■■□□□ 1.53
CMC2-205ENST00000562828 RIMBP3CA6NJZ7 1639 aa24.58■■□□□ 1.53
CMC2-205ENST00000562828 RIMBP3BA6NNM3 1639 aa24.58■■□□□ 1.53
CMC2-205ENST00000562828 RIMBP3Q9UFD9 1639 aa24.58■■□□□ 1.53
CMC2-205ENST00000562828 ERICH3Q5RHP9 1530 aa24.57■■□□□ 1.52
CMC2-205ENST00000562828 ARHGEF11O15085 1522 aa24.51■■□□□ 1.51
CMC2-205ENST00000562828 FBLN2P98095 1184 aa24.49■■□□□ 1.51
CMC2-205ENST00000562828 GRIN2AQ12879 1464 aa24.48■■□□□ 1.51
CMC2-205ENST00000562828 TRIM41Q8WV44 630 aa24.46■■□□□ 1.51
CMC2-205ENST00000562828 CHMP7Q8WUX9 453 aaPredicted RBP24.45■■□□□ 1.5
CMC2-205ENST00000562828 FHAD1B1AJZ9 1412 aa24.44■■□□□ 1.5
CMC2-205ENST00000562828 CEP170Q5SW79 1584 aa24.44■■□□□ 1.5
CMC2-205ENST00000562828 NUP160Q12769 1436 aa24.41■■□□□ 1.5
CMC2-205ENST00000562828 KIF27Q86VH2 1401 aa24.36■■□□□ 1.49
CMC2-205ENST00000562828 IGF1RP08069 1367 aa24.36■■□□□ 1.49
CMC2-205ENST00000562828 CUL7Q14999 1698 aa24.34■■□□□ 1.49
CMC2-205ENST00000562828 ARAP1Q96P48 1450 aa24.34■■□□□ 1.49
CMC2-205ENST00000562828 SHROOM2Q13796 1616 aa24.33■■□□□ 1.49
CMC2-205ENST00000562828 RUSC2Q8N2Y8 1516 aa24.28■■□□□ 1.48
CMC2-205ENST00000562828 ERCC6L2Q5T890 1561 aa24.27■■□□□ 1.48
CMC2-205ENST00000562828 CARMIL1Q5VZK9 1371 aa24.16■■□□□ 1.46
CMC2-205ENST00000562828 CYB5RLQ6IPT4 315 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms