RNA–Protein interactions for RNA: ENST00000562784.1

PKM-206, Transcript of pyruvate kinase M1/2, humanhuman

TSL 2

Gene PKM, Length 529 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-206ENST00000562784 NISCHQ9Y2I1 1504 aa26.97■■□□□ 1.91
PKM-206ENST00000562784 CCDC180Q9P1Z9 1646 aa23.9■■□□□ 1.42
PKM-206ENST00000562784 ABCC9O60706 1549 aa23.54■■□□□ 1.36
PKM-206ENST00000562784 RB1CC1Q8TDY2 1594 aa22.53■■□□□ 1.2
PKM-206ENST00000562784 NACADO15069 1562 aa22.51■■□□□ 1.19
PKM-206ENST00000562784 DCAF8L2P0C7V8 631 aa22.51■■□□□ 1.19
PKM-206ENST00000562784 ZCCHC6Q5VYS8 1495 aaKnown RBP22.47■■□□□ 1.19
PKM-206ENST00000562784 MYO15BQ96JP2 1530 aa22.38■■□□□ 1.17
PKM-206ENST00000562784 DCAF1Q9Y4B6 1507 aa22.29■■□□□ 1.16
PKM-206ENST00000562784 UNC13AQ9UPW8 1703 aa22.04■■□□□ 1.12
PKM-206ENST00000562784 PABPN1Q86U42 306 aaKnown RBP eCLIP22.03■■□□□ 1.12
PKM-206ENST00000562784 BICRAQ9NZM4 1560 aa21.98■■□□□ 1.11
PKM-206ENST00000562784 SCRIBQ14160 1630 aa21.87■■□□□ 1.09
PKM-206ENST00000562784 DNAJC5BQ9UF47 199 aa21.78■■□□□ 1.08
PKM-206ENST00000562784 SHROOM4Q9ULL8 1493 aa21.6■■□□□ 1.05
PKM-206ENST00000562784 EIF4G1Q04637 1599 aaKnown RBP21.34■■□□□ 1.01
PKM-206ENST00000562784 CC2D2AQ9P2K1 1620 aa21.26■□□□□ 0.99
PKM-206ENST00000562784 CECR2Q9BXF3 1484 aa21.13■□□□□ 0.97
PKM-206ENST00000562784 SMARCA4P51532 1647 aa20.91■□□□□ 0.94
PKM-206ENST00000562784 BAZ1AQ9NRL2 1556 aaPredicted RBP20.85■□□□□ 0.93
PKM-206ENST00000562784 ATAD2BQ9ULI0 1458 aa20.85■□□□□ 0.93
PKM-206ENST00000562784 NCAPD3P42695 1498 aa20.84■□□□□ 0.93
PKM-206ENST00000562784 MROH2BQ7Z745 1585 aa20.83■□□□□ 0.92
PKM-206ENST00000562784 SMARCA2P51531 1590 aa20.73■□□□□ 0.91
PKM-206ENST00000562784 PEG3Q9GZU2 1588 aa20.72■□□□□ 0.91
PKM-206ENST00000562784 HMGXB3Q12766 1538 aa20.68■□□□□ 0.9
PKM-206ENST00000562784 BAZ1BQ9UIG0 1483 aaKnown RBP20.62■□□□□ 0.89
PKM-206ENST00000562784 RSF1Q96T23 1441 aaPredicted RBP20.57■□□□□ 0.88
PKM-206ENST00000562784 WIZO95785 1651 aa20.56■□□□□ 0.88
PKM-206ENST00000562784 NESP48681 1621 aa20.39■□□□□ 0.86
PKM-206ENST00000562784 TOP2AP11388 1531 aaKnown RBP20.32■□□□□ 0.84
PKM-206ENST00000562784 LAMC3Q9Y6N6 1575 aa20.22■□□□□ 0.83
PKM-206ENST00000562784 CADPSQ9ULU8 1353 aa20.21■□□□□ 0.83
PKM-206ENST00000562784 ERCC6Q03468 1493 aa20.19■□□□□ 0.82
PKM-206ENST00000562784 CCDC88BA6NC98 1476 aa20.13■□□□□ 0.81
PKM-206ENST00000562784 CFTRP13569 1480 aa20.1■□□□□ 0.81
PKM-206ENST00000562784 PDS5BQ9NTI5 1447 aa20.09■□□□□ 0.81
PKM-206ENST00000562784 KIF21AQ7Z4S6 1674 aa20.06■□□□□ 0.8
PKM-206ENST00000562784 THOC2Q8NI27 1593 aaKnown RBP20.04■□□□□ 0.8
PKM-206ENST00000562784 CUX2O14529 1486 aa20.03■□□□□ 0.8
PKM-206ENST00000562784 SUPT5HO00267 1087 aaKnown RBP19.97■□□□□ 0.79
PKM-206ENST00000562784 FANCD2Q9BXW9 1451 aa19.97■□□□□ 0.79
PKM-206ENST00000562784 MRC2Q9UBG0 1479 aa19.92■□□□□ 0.78
PKM-206ENST00000562784 CEP164Q9UPV0 1460 aa19.92■□□□□ 0.78
PKM-206ENST00000562784 WDR62O43379 1518 aa19.87■□□□□ 0.77
PKM-206ENST00000562784 URB2Q14146 1524 aaKnown RBP19.82■□□□□ 0.76
PKM-206ENST00000562784 PRDM2Q13029 1718 aa19.8■□□□□ 0.76
PKM-206ENST00000562784 DNAJC5Q9H3Z4 198 aa19.67■□□□□ 0.74
PKM-206ENST00000562784 TOPBP1Q92547 1522 aa19.66■□□□□ 0.74
PKM-206ENST00000562784 DNMBPQ6XZF7 1577 aa19.6■□□□□ 0.73
PKM-206ENST00000562784 ABCC8Q09428 1581 aa19.57■□□□□ 0.72
PKM-206ENST00000562784 CUX1P39880 1505 aa19.52■□□□□ 0.72
PKM-206ENST00000562784 IFT140Q96RY7 1462 aa19.52■□□□□ 0.72
PKM-206ENST00000562784 ZNF608Q9ULD9 1512 aaPredicted RBP19.51■□□□□ 0.71
PKM-206ENST00000562784 POLA1P09884 1462 aaPredicted RBP19.5■□□□□ 0.71
PKM-206ENST00000562784 RAD54L2Q9Y4B4 1467 aa19.46■□□□□ 0.71
PKM-206ENST00000562784 TARBP1Q13395 1621 aaKnown RBP19.45■□□□□ 0.7
PKM-206ENST00000562784 FGD5Q6ZNL6 1462 aa19.44■□□□□ 0.7
PKM-206ENST00000562784 SOGA1O94964 1423 aa19.41■□□□□ 0.7
PKM-206ENST00000562784 AQRO60306 1485 aaKnown RBP eCLIP19.38■□□□□ 0.694e-17■■■■■ 27.8
PKM-206ENST00000562784 EIF4G3O43432 1585 aaKnown RBP19.36■□□□□ 0.69
PKM-206ENST00000562784 WRNQ14191 1432 aaPredicted RBP eCLIP19.34■□□□□ 0.69
PKM-206ENST00000562784 TDRD9Q8NDG6 1382 aaKnown RBP19.33■□□□□ 0.69
PKM-206ENST00000562784 SYNJ1O43426 1573 aa19.33■□□□□ 0.69
PKM-206ENST00000562784 TOP2BQ02880 1626 aa19.29■□□□□ 0.68
PKM-206ENST00000562784 BIVM-ERCC5R4GMW8 1640 aa19.28■□□□□ 0.68
PKM-206ENST00000562784 WDR97A6NE52 1622 aa19.25■□□□□ 0.67
PKM-206ENST00000562784 ABCA10Q8WWZ4 1543 aa19.24■□□□□ 0.67
PKM-206ENST00000562784 OSCARQ8IYS5 282 aa19.2■□□□□ 0.66
PKM-206ENST00000562784 SNAPC4Q5SXM2 1469 aa19.17■□□□□ 0.66
PKM-206ENST00000562784 GRIN2BQ13224 1484 aa19.16■□□□□ 0.66
PKM-206ENST00000562784 GAPVD1Q14C86 1478 aa19.16■□□□□ 0.66
PKM-206ENST00000562784 ABCA5Q8WWZ7 1642 aa19.16■□□□□ 0.66
PKM-206ENST00000562784 MAGI1Q96QZ7 1491 aaPredicted RBP19.09■□□□□ 0.65
PKM-206ENST00000562784 CHD1O14646 1710 aa19.09■□□□□ 0.65
PKM-206ENST00000562784 FBLN2P98095 1184 aa19.08■□□□□ 0.64
PKM-206ENST00000562784 PBRM1Q86U86 1689 aa19.08■□□□□ 0.64
PKM-206ENST00000562784 SYNJ2O15056 1496 aa19.04■□□□□ 0.64
PKM-206ENST00000562784 CHMP7Q8WUX9 453 aaPredicted RBP19.02■□□□□ 0.64
PKM-206ENST00000562784 ADAMTS12P58397 1594 aa18.98■□□□□ 0.63
PKM-206ENST00000562784 ERICH3Q5RHP9 1530 aa18.97■□□□□ 0.63
PKM-206ENST00000562784 CLASP1Q7Z460 1538 aa18.95■□□□□ 0.62
PKM-206ENST00000562784 FHAD1B1AJZ9 1412 aa18.94■□□□□ 0.62
PKM-206ENST00000562784 TRIM41Q8WV44 630 aa18.94■□□□□ 0.62
PKM-206ENST00000562784 IGF1RP08069 1367 aa18.93■□□□□ 0.62
PKM-206ENST00000562784 GRIN2AQ12879 1464 aa18.92■□□□□ 0.62
PKM-206ENST00000562784 ARHGEF11O15085 1522 aa18.92■□□□□ 0.62
PKM-206ENST00000562784 RIMBP3CA6NJZ7 1639 aa18.92■□□□□ 0.62
PKM-206ENST00000562784 RIMBP3BA6NNM3 1639 aa18.92■□□□□ 0.62
PKM-206ENST00000562784 RIMBP3Q9UFD9 1639 aa18.92■□□□□ 0.62
PKM-206ENST00000562784 KIF27Q86VH2 1401 aa18.91■□□□□ 0.62
PKM-206ENST00000562784 NUP160Q12769 1436 aa18.88■□□□□ 0.61
PKM-206ENST00000562784 CEP170Q5SW79 1584 aa18.86■□□□□ 0.61
PKM-206ENST00000562784 RUSC2Q8N2Y8 1516 aa18.86■□□□□ 0.61
PKM-206ENST00000562784 ARAP1Q96P48 1450 aa18.8■□□□□ 0.6
PKM-206ENST00000562784 CARMIL1Q5VZK9 1371 aa18.76■□□□□ 0.59
PKM-206ENST00000562784 CYB5RLQ6IPT4 315 aa18.75■□□□□ 0.59
PKM-206ENST00000562784 ERCC6L2Q5T890 1561 aa18.75■□□□□ 0.59
PKM-206ENST00000562784 CUL7Q14999 1698 aa18.75■□□□□ 0.59
PKM-206ENST00000562784 SHROOM2Q13796 1616 aa18.71■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms