RNA–Protein interactions for RNA: ENST00000562765.5

SCAMP5-205, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 2

Gene SCAMP5, Length 1,206 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-205ENST00000562765 NISCHQ9Y2I1 1504 aa49.3■■■■■ 5.48
SCAMP5-205ENST00000562765 ABCC9O60706 1549 aa44.36■■■■■ 4.69
SCAMP5-205ENST00000562765 CCDC180Q9P1Z9 1646 aa44.17■■■■■ 4.66
SCAMP5-205ENST00000562765 RB1CC1Q8TDY2 1594 aa42.1■■■■■ 4.33
SCAMP5-205ENST00000562765 NACADO15069 1562 aa41.79■■■■■ 4.28
SCAMP5-205ENST00000562765 DCAF8L2P0C7V8 631 aa41.77■■■■■ 4.28
SCAMP5-205ENST00000562765 DNAJC5BQ9UF47 199 aa41.72■■■■■ 4.27
SCAMP5-205ENST00000562765 PABPN1Q86U42 306 aaKnown RBP eCLIP41.36■■■■■ 4.21
SCAMP5-205ENST00000562765 UNC13AQ9UPW8 1703 aa41.25■■■■■ 4.19
SCAMP5-205ENST00000562765 MYO15BQ96JP2 1530 aa41.13■■■■■ 4.18
SCAMP5-205ENST00000562765 BICRAQ9NZM4 1560 aa40.95■■■■■ 4.15
SCAMP5-205ENST00000562765 ZCCHC6Q5VYS8 1495 aaKnown RBP40.83■■■■■ 4.13
SCAMP5-205ENST00000562765 DCAF1Q9Y4B6 1507 aa40.63■■■■■ 4.1
SCAMP5-205ENST00000562765 SCRIBQ14160 1630 aa40.38■■■■■ 4.06
SCAMP5-205ENST00000562765 SHROOM4Q9ULL8 1493 aa40.19■■■■■ 4.03
SCAMP5-205ENST00000562765 CC2D2AQ9P2K1 1620 aa40.04■■■■■ 4
SCAMP5-205ENST00000562765 CECR2Q9BXF3 1484 aa39.92■■■■□ 3.98
SCAMP5-205ENST00000562765 EIF4G1Q04637 1599 aaKnown RBP39.92■■■■□ 3.98
SCAMP5-205ENST00000562765 NCAPD3P42695 1498 aa38.6■■■■□ 3.77
SCAMP5-205ENST00000562765 ATAD2BQ9ULI0 1458 aa38.52■■■■□ 3.76
SCAMP5-205ENST00000562765 SMARCA4P51532 1647 aa38.47■■■■□ 3.75
SCAMP5-205ENST00000562765 SMARCA2P51531 1590 aa38.35■■■■□ 3.73
SCAMP5-205ENST00000562765 HMGXB3Q12766 1538 aa38.28■■■■□ 3.72
SCAMP5-205ENST00000562765 ERCC6Q03468 1493 aa38.24■■■■□ 3.71
SCAMP5-205ENST00000562765 DNAJC5Q9H3Z4 198 aa38.23■■■■□ 3.71
SCAMP5-205ENST00000562765 BAZ1AQ9NRL2 1556 aaPredicted RBP38.23■■■■□ 3.71
SCAMP5-205ENST00000562765 BAZ1BQ9UIG0 1483 aaKnown RBP38.13■■■■□ 3.69
SCAMP5-205ENST00000562765 NESP48681 1621 aa38.12■■■■□ 3.69
SCAMP5-205ENST00000562765 CUX2O14529 1486 aa38.12■■■■□ 3.69
SCAMP5-205ENST00000562765 MROH2BQ7Z745 1585 aa38.04■■■■□ 3.68
SCAMP5-205ENST00000562765 PEG3Q9GZU2 1588 aa38.03■■■■□ 3.68
SCAMP5-205ENST00000562765 LAMC3Q9Y6N6 1575 aa37.72■■■■□ 3.63
SCAMP5-205ENST00000562765 THOC2Q8NI27 1593 aaKnown RBP37.66■■■■□ 3.62
SCAMP5-205ENST00000562765 WIZO95785 1651 aa37.6■■■■□ 3.61
SCAMP5-205ENST00000562765 KIF21AQ7Z4S6 1674 aa37.6■■■■□ 3.61
SCAMP5-205ENST00000562765 PDS5BQ9NTI5 1447 aa37.52■■■■□ 3.6
SCAMP5-205ENST00000562765 CADPSQ9ULU8 1353 aa37.45■■■■□ 3.59
SCAMP5-205ENST00000562765 RSF1Q96T23 1441 aaPredicted RBP37.22■■■■□ 3.55
SCAMP5-205ENST00000562765 MRC2Q9UBG0 1479 aa37.21■■■■□ 3.55
SCAMP5-205ENST00000562765 WDR62O43379 1518 aa37.11■■■■□ 3.53
SCAMP5-205ENST00000562765 CEP164Q9UPV0 1460 aa37.06■■■■□ 3.52
SCAMP5-205ENST00000562765 FANCD2Q9BXW9 1451 aa37.04■■■■□ 3.52
SCAMP5-205ENST00000562765 TOP2AP11388 1531 aaKnown RBP37.04■■■■□ 3.52
SCAMP5-205ENST00000562765 CFTRP13569 1480 aa37.01■■■■□ 3.51
SCAMP5-205ENST00000562765 URB2Q14146 1524 aaKnown RBP36.77■■■■□ 3.48
SCAMP5-205ENST00000562765 CCDC88BA6NC98 1476 aa36.69■■■■□ 3.46
SCAMP5-205ENST00000562765 TRIM41Q8WV44 630 aa36.63■■■■□ 3.45
SCAMP5-205ENST00000562765 PRDM2Q13029 1718 aa36.62■■■■□ 3.45
SCAMP5-205ENST00000562765 OSCARQ8IYS5 282 aa36.44■■■■□ 3.42
SCAMP5-205ENST00000562765 ZNF608Q9ULD9 1512 aaPredicted RBP36.35■■■■□ 3.41
SCAMP5-205ENST00000562765 TOPBP1Q92547 1522 aa36.34■■■■□ 3.41
SCAMP5-205ENST00000562765 IFT140Q96RY7 1462 aa36.3■■■■□ 3.4
SCAMP5-205ENST00000562765 DNMBPQ6XZF7 1577 aa36.18■■■■□ 3.38
SCAMP5-205ENST00000562765 ABCC8Q09428 1581 aa36.16■■■■□ 3.38
SCAMP5-205ENST00000562765 EIF4G3O43432 1585 aaKnown RBP36.09■■■■□ 3.37
SCAMP5-205ENST00000562765 TARBP1Q13395 1621 aaKnown RBP36.02■■■■□ 3.36
SCAMP5-205ENST00000562765 AQRO60306 1485 aaKnown RBP eCLIP36.01■■■■□ 3.36
SCAMP5-205ENST00000562765 RIMBP3CA6NJZ7 1639 aa36■■■■□ 3.35
SCAMP5-205ENST00000562765 RIMBP3BA6NNM3 1639 aa36■■■■□ 3.35
SCAMP5-205ENST00000562765 RIMBP3Q9UFD9 1639 aa36■■■■□ 3.35
SCAMP5-205ENST00000562765 POLA1P09884 1462 aaPredicted RBP35.97■■■■□ 3.35
SCAMP5-205ENST00000562765 RAD54L2Q9Y4B4 1467 aa35.91■■■■□ 3.34
SCAMP5-205ENST00000562765 CHD1O14646 1710 aa35.86■■■■□ 3.33
SCAMP5-205ENST00000562765 ARHGEF11O15085 1522 aa35.86■■■■□ 3.33
SCAMP5-205ENST00000562765 SOGA1O94964 1423 aa35.82■■■■□ 3.32
SCAMP5-205ENST00000562765 FBLN2P98095 1184 aa35.81■■■■□ 3.32
SCAMP5-205ENST00000562765 TDRD9Q8NDG6 1382 aaKnown RBP35.79■■■■□ 3.32
SCAMP5-205ENST00000562765 FGD5Q6ZNL6 1462 aa35.75■■■■□ 3.31
SCAMP5-205ENST00000562765 CUX1P39880 1505 aa35.73■■■■□ 3.31
SCAMP5-205ENST00000562765 CYB5RLQ6IPT4 315 aa35.67■■■■□ 3.3
SCAMP5-205ENST00000562765 SUPT5HO00267 1087 aaKnown RBP35.65■■■■□ 3.3
SCAMP5-205ENST00000562765 SNAPC4Q5SXM2 1469 aa35.6■■■■□ 3.29
SCAMP5-205ENST00000562765 WDR97A6NE52 1622 aa35.53■■■■□ 3.28
SCAMP5-205ENST00000562765 ARAP1Q96P48 1450 aa35.53■■■■□ 3.28
SCAMP5-205ENST00000562765 CHMP7Q8WUX9 453 aaPredicted RBP35.48■■■■□ 3.27
SCAMP5-205ENST00000562765 GRIN2BQ13224 1484 aa35.47■■■■□ 3.27
SCAMP5-205ENST00000562765 MAGI1Q96QZ7 1491 aaPredicted RBP35.44■■■■□ 3.26
SCAMP5-205ENST00000562765 CLASP1Q7Z460 1538 aa35.4■■■■□ 3.26
SCAMP5-205ENST00000562765 PBRM1Q86U86 1689 aa35.37■■■■□ 3.25
SCAMP5-205ENST00000562765 GAPVD1Q14C86 1478 aa35.36■■■■□ 3.25
SCAMP5-205ENST00000562765 SYNJ2O15056 1496 aa35.35■■■■□ 3.25
SCAMP5-205ENST00000562765 SYNJ1O43426 1573 aa35.35■■■■□ 3.25
SCAMP5-205ENST00000562765 ABCA10Q8WWZ4 1543 aa35.3■■■■□ 3.24
SCAMP5-205ENST00000562765 TRHP20396 242 aaPredicted RBP35.27■■■■□ 3.24
SCAMP5-205ENST00000562765 ABCA5Q8WWZ7 1642 aa35.26■■■■□ 3.24
SCAMP5-205ENST00000562765 WRNQ14191 1432 aaPredicted RBP eCLIP35.15■■■■□ 3.22
SCAMP5-205ENST00000562765 TOP2BQ02880 1626 aa35.1■■■■□ 3.21
SCAMP5-205ENST00000562765 BIVM-ERCC5R4GMW8 1640 aa35.1■■■■□ 3.21
SCAMP5-205ENST00000562765 GRIN2AQ12879 1464 aa35.03■■■■□ 3.2
SCAMP5-205ENST00000562765 ADAMTS12P58397 1594 aa35■■■■□ 3.19
SCAMP5-205ENST00000562765 ERCC6L2Q5T890 1561 aa34.95■■■■□ 3.18
SCAMP5-205ENST00000562765 CEP170Q5SW79 1584 aa34.94■■■■□ 3.18
SCAMP5-205ENST00000562765 NUP160Q12769 1436 aa34.89■■■■□ 3.18
SCAMP5-205ENST00000562765 FHAD1B1AJZ9 1412 aa34.89■■■■□ 3.18
SCAMP5-205ENST00000562765 ERICH3Q5RHP9 1530 aa34.84■■■■□ 3.17
SCAMP5-205ENST00000562765 SHROOM2Q13796 1616 aa34.74■■■■□ 3.15
SCAMP5-205ENST00000562765 PRG4Q92954 1404 aaPredicted RBP34.61■■■■□ 3.13
SCAMP5-205ENST00000562765 JPH4Q96JJ6 628 aa34.59■■■■□ 3.13
SCAMP5-205ENST00000562765 RUSC2Q8N2Y8 1516 aa34.5■■■■□ 3.11
SCAMP5-205ENST00000562765 IGF1RP08069 1367 aa34.46■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms