RNA–Protein interactions for RNA: ENST00000562712.5

CDH11-204, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 613 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-204ENST00000562712 NISCHQ9Y2I1 1504 aa30.32■■■□□ 2.44
CDH11-204ENST00000562712 CCDC180Q9P1Z9 1646 aa26.97■■□□□ 1.91
CDH11-204ENST00000562712 ABCC9O60706 1549 aa26.53■■□□□ 1.84
CDH11-204ENST00000562712 RB1CC1Q8TDY2 1594 aa25.44■■□□□ 1.66
CDH11-204ENST00000562712 NACADO15069 1562 aa25.34■■□□□ 1.65
CDH11-204ENST00000562712 ZCCHC6Q5VYS8 1495 aaKnown RBP25.3■■□□□ 1.64
CDH11-204ENST00000562712 DCAF8L2P0C7V8 631 aa25.24■■□□□ 1.63
CDH11-204ENST00000562712 MYO15BQ96JP2 1530 aa25.12■■□□□ 1.61
CDH11-204ENST00000562712 DCAF1Q9Y4B6 1507 aa25.12■■□□□ 1.61
CDH11-204ENST00000562712 UNC13AQ9UPW8 1703 aa24.99■■□□□ 1.59
CDH11-204ENST00000562712 BICRAQ9NZM4 1560 aa24.74■■□□□ 1.55
CDH11-204ENST00000562712 PABPN1Q86U42 306 aaKnown RBP eCLIP24.65■■□□□ 1.54
CDH11-204ENST00000562712 DNAJC5BQ9UF47 199 aa24.55■■□□□ 1.52
CDH11-204ENST00000562712 SCRIBQ14160 1630 aa24.53■■□□□ 1.52
CDH11-204ENST00000562712 SHROOM4Q9ULL8 1493 aa24.43■■□□□ 1.5
CDH11-204ENST00000562712 EIF4G1Q04637 1599 aaKnown RBP24.08■■□□□ 1.44
CDH11-204ENST00000562712 CC2D2AQ9P2K1 1620 aa24.04■■□□□ 1.44
CDH11-204ENST00000562712 CECR2Q9BXF3 1484 aa23.87■■□□□ 1.41
CDH11-204ENST00000562712 BAZ1AQ9NRL2 1556 aaPredicted RBP23.47■■□□□ 1.35
CDH11-204ENST00000562712 SMARCA4P51532 1647 aa23.45■■□□□ 1.34
CDH11-204ENST00000562712 NCAPD3P42695 1498 aa23.36■■□□□ 1.33
CDH11-204ENST00000562712 MROH2BQ7Z745 1585 aa23.35■■□□□ 1.33
CDH11-204ENST00000562712 ATAD2BQ9ULI0 1458 aa23.34■■□□□ 1.33
CDH11-204ENST00000562712 SMARCA2P51531 1590 aa23.31■■□□□ 1.32
CDH11-204ENST00000562712 HMGXB3Q12766 1538 aa23.28■■□□□ 1.32
CDH11-204ENST00000562712 PEG3Q9GZU2 1588 aa23.24■■□□□ 1.31
CDH11-204ENST00000562712 RSF1Q96T23 1441 aaPredicted RBP23.24■■□□□ 1.31
CDH11-204ENST00000562712 BAZ1BQ9UIG0 1483 aaKnown RBP23.12■■□□□ 1.29
CDH11-204ENST00000562712 WIZO95785 1651 aa23.1■■□□□ 1.29
CDH11-204ENST00000562712 NESP48681 1621 aa22.9■■□□□ 1.26
CDH11-204ENST00000562712 SUPT5HO00267 1087 aaKnown RBP22.89■■□□□ 1.25
CDH11-204ENST00000562712 TOP2AP11388 1531 aaKnown RBP22.88■■□□□ 1.25
CDH11-204ENST00000562712 ERCC6Q03468 1493 aa22.85■■□□□ 1.25
CDH11-204ENST00000562712 LAMC3Q9Y6N6 1575 aa22.82■■□□□ 1.24
CDH11-204ENST00000562712 CUX2O14529 1486 aa22.78■■□□□ 1.24
CDH11-204ENST00000562712 THOC2Q8NI27 1593 aaKnown RBP22.71■■□□□ 1.23
CDH11-204ENST00000562712 KIF21AQ7Z4S6 1674 aa22.71■■□□□ 1.23
CDH11-204ENST00000562712 CCDC88BA6NC98 1476 aa22.65■■□□□ 1.22
CDH11-204ENST00000562712 CADPSQ9ULU8 1353 aa22.62■■□□□ 1.21
CDH11-204ENST00000562712 PDS5BQ9NTI5 1447 aa22.59■■□□□ 1.21
CDH11-204ENST00000562712 CFTRP13569 1480 aa22.48■■□□□ 1.19
CDH11-204ENST00000562712 MRC2Q9UBG0 1479 aa22.44■■□□□ 1.18
CDH11-204ENST00000562712 PRDM2Q13029 1718 aa22.43■■□□□ 1.18
CDH11-204ENST00000562712 WDR62O43379 1518 aa22.43■■□□□ 1.18
CDH11-204ENST00000562712 CEP164Q9UPV0 1460 aa22.41■■□□□ 1.18
CDH11-204ENST00000562712 FANCD2Q9BXW9 1451 aa22.4■■□□□ 1.18
CDH11-204ENST00000562712 DNAJC5Q9H3Z4 198 aa22.3■■□□□ 1.16
CDH11-204ENST00000562712 URB2Q14146 1524 aaKnown RBP22.23■■□□□ 1.15
CDH11-204ENST00000562712 TOPBP1Q92547 1522 aa22.04■■□□□ 1.12
CDH11-204ENST00000562712 ABCC8Q09428 1581 aa22.01■■□□□ 1.11
CDH11-204ENST00000562712 DNMBPQ6XZF7 1577 aa22.01■■□□□ 1.11
CDH11-204ENST00000562712 IFT140Q96RY7 1462 aa21.94■■□□□ 1.1
CDH11-204ENST00000562712 CUX1P39880 1505 aa21.89■■□□□ 1.09
CDH11-204ENST00000562712 ZNF608Q9ULD9 1512 aaPredicted RBP21.89■■□□□ 1.09
CDH11-204ENST00000562712 WRNQ14191 1432 aaPredicted RBP eCLIP21.89■■□□□ 1.09
CDH11-204ENST00000562712 TARBP1Q13395 1621 aaKnown RBP21.87■■□□□ 1.09
CDH11-204ENST00000562712 EIF4G3O43432 1585 aaKnown RBP21.86■■□□□ 1.09
CDH11-204ENST00000562712 POLA1P09884 1462 aaPredicted RBP21.83■■□□□ 1.08
CDH11-204ENST00000562712 TOP2BQ02880 1626 aa21.79■■□□□ 1.08
CDH11-204ENST00000562712 SYNJ1O43426 1573 aa21.78■■□□□ 1.08
CDH11-204ENST00000562712 BIVM-ERCC5R4GMW8 1640 aa21.77■■□□□ 1.07
CDH11-204ENST00000562712 FGD5Q6ZNL6 1462 aa21.76■■□□□ 1.07
CDH11-204ENST00000562712 SOGA1O94964 1423 aa21.73■■□□□ 1.07
CDH11-204ENST00000562712 RAD54L2Q9Y4B4 1467 aa21.71■■□□□ 1.07
CDH11-204ENST00000562712 WDR97A6NE52 1622 aa21.69■■□□□ 1.06
CDH11-204ENST00000562712 AQRO60306 1485 aaKnown RBP eCLIP21.67■■□□□ 1.06
CDH11-204ENST00000562712 CHD1O14646 1710 aa21.65■■□□□ 1.06
CDH11-204ENST00000562712 TRIM41Q8WV44 630 aa21.64■■□□□ 1.05
CDH11-204ENST00000562712 OSCARQ8IYS5 282 aa21.63■■□□□ 1.05
CDH11-204ENST00000562712 ABCA10Q8WWZ4 1543 aa21.59■■□□□ 1.05
CDH11-204ENST00000562712 CHIC1Q5VXU3 224 aa21.57■■□□□ 1.04
CDH11-204ENST00000562712 TDRD9Q8NDG6 1382 aaKnown RBP21.56■■□□□ 1.04
CDH11-204ENST00000562712 PBRM1Q86U86 1689 aa21.53■■□□□ 1.04
CDH11-204ENST00000562712 ABCA5Q8WWZ7 1642 aa21.52■■□□□ 1.04
CDH11-204ENST00000562712 SNAPC4Q5SXM2 1469 aa21.52■■□□□ 1.03
CDH11-204ENST00000562712 RIMBP3CA6NJZ7 1639 aa21.5■■□□□ 1.03
CDH11-204ENST00000562712 RIMBP3BA6NNM3 1639 aa21.5■■□□□ 1.03
CDH11-204ENST00000562712 RIMBP3Q9UFD9 1639 aa21.5■■□□□ 1.03
CDH11-204ENST00000562712 GRIN2BQ13224 1484 aa21.48■■□□□ 1.03
CDH11-204ENST00000562712 MAGI1Q96QZ7 1491 aaPredicted RBP21.48■■□□□ 1.03
CDH11-204ENST00000562712 GAPVD1Q14C86 1478 aa21.46■■□□□ 1.03
CDH11-204ENST00000562712 ARHGEF11O15085 1522 aa21.45■■□□□ 1.02
CDH11-204ENST00000562712 KIF27Q86VH2 1401 aa21.42■■□□□ 1.02
CDH11-204ENST00000562712 CLASP1Q7Z460 1538 aa21.39■■□□□ 1.01
CDH11-204ENST00000562712 SYNJ2O15056 1496 aa21.39■■□□□ 1.01
CDH11-204ENST00000562712 FBLN2P98095 1184 aa21.35■■□□□ 1.01
CDH11-204ENST00000562712 ERICH3Q5RHP9 1530 aa21.34■■□□□ 1.01
CDH11-204ENST00000562712 ADAMTS12P58397 1594 aa21.33■■□□□ 1.01
CDH11-204ENST00000562712 IGF1RP08069 1367 aa21.32■■□□□ 1
CDH11-204ENST00000562712 RUSC2Q8N2Y8 1516 aa21.29■■□□□ 1
CDH11-204ENST00000562712 CHMP7Q8WUX9 453 aaPredicted RBP21.27■■□□□ 1
CDH11-204ENST00000562712 ARAP1Q96P48 1450 aa21.26■□□□□ 0.99
CDH11-204ENST00000562712 FHAD1B1AJZ9 1412 aa21.23■□□□□ 0.99
CDH11-204ENST00000562712 EEA1Q15075 1411 aa21.23■□□□□ 0.99
CDH11-204ENST00000562712 GRIN2AQ12879 1464 aa21.23■□□□□ 0.99
CDH11-204ENST00000562712 CSRNP3Q8WYN3 585 aa21.19■□□□□ 0.98
CDH11-204ENST00000562712 CEP170Q5SW79 1584 aa21.19■□□□□ 0.98
CDH11-204ENST00000562712 CUL7Q14999 1698 aa21.18■□□□□ 0.98
CDH11-204ENST00000562712 CARMIL1Q5VZK9 1371 aa21.18■□□□□ 0.98
CDH11-204ENST00000562712 NUP160Q12769 1436 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms