RNA–Protein interactions for RNA: ENST00000562599.5

POLR2C-202, Transcript of RNA polymerase II subunit C, humanhuman

TSL 5

Gene POLR2C, Length 748 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2C-202ENST00000562599 NISCHQ9Y2I1 1504 aa25.77■■□□□ 1.72
POLR2C-202ENST00000562599 CCDC180Q9P1Z9 1646 aa22.58■■□□□ 1.21
POLR2C-202ENST00000562599 ZCCHC6Q5VYS8 1495 aaKnown RBP21.59■■□□□ 1.05
POLR2C-202ENST00000562599 ABCC9O60706 1549 aa21.51■■□□□ 1.03
POLR2C-202ENST00000562599 DCAF8L2P0C7V8 631 aa21.43■■□□□ 1.02
POLR2C-202ENST00000562599 DCAF1Q9Y4B6 1507 aa21.3■■□□□ 1
POLR2C-202ENST00000562599 MYO15BQ96JP2 1530 aa21.12■□□□□ 0.97
POLR2C-202ENST00000562599 NACADO15069 1562 aa21.08■□□□□ 0.97
POLR2C-202ENST00000562599 RB1CC1Q8TDY2 1594 aa20.95■□□□□ 0.94
POLR2C-202ENST00000562599 SHROOM4Q9ULL8 1493 aa20.92■□□□□ 0.94
POLR2C-202ENST00000562599 SCRIBQ14160 1630 aa20.73■□□□□ 0.91
POLR2C-202ENST00000562599 UNC13AQ9UPW8 1703 aa20.47■□□□□ 0.87
POLR2C-202ENST00000562599 PABPN1Q86U42 306 aaKnown RBP eCLIP20.26■□□□□ 0.83
POLR2C-202ENST00000562599 BICRAQ9NZM4 1560 aa20.25■□□□□ 0.83
POLR2C-202ENST00000562599 SUPT5HO00267 1087 aaKnown RBP20.06■□□□□ 0.8
POLR2C-202ENST00000562599 CECR2Q9BXF3 1484 aa20.01■□□□□ 0.79
POLR2C-202ENST00000562599 BAZ1AQ9NRL2 1556 aaPredicted RBP19.93■□□□□ 0.78
POLR2C-202ENST00000562599 RSF1Q96T23 1441 aaPredicted RBP19.91■□□□□ 0.78
POLR2C-202ENST00000562599 MROH2BQ7Z745 1585 aa19.89■□□□□ 0.77
POLR2C-202ENST00000562599 SMARCA4P51532 1647 aa19.85■□□□□ 0.77
POLR2C-202ENST00000562599 WIZO95785 1651 aa19.72■□□□□ 0.75
POLR2C-202ENST00000562599 EIF4G1Q04637 1599 aaKnown RBP19.69■□□□□ 0.74
POLR2C-202ENST00000562599 PEG3Q9GZU2 1588 aa19.59■□□□□ 0.73
POLR2C-202ENST00000562599 SMARCA2P51531 1590 aa19.58■□□□□ 0.73
POLR2C-202ENST00000562599 ATAD2BQ9ULI0 1458 aa19.56■□□□□ 0.72
POLR2C-202ENST00000562599 TOP2AP11388 1531 aaKnown RBP19.53■□□□□ 0.72
POLR2C-202ENST00000562599 BAZ1BQ9UIG0 1483 aaKnown RBP19.48■□□□□ 0.71
POLR2C-202ENST00000562599 CC2D2AQ9P2K1 1620 aa19.45■□□□□ 0.7
POLR2C-202ENST00000562599 NCAPD3P42695 1498 aa19.43■□□□□ 0.7
POLR2C-202ENST00000562599 HMGXB3Q12766 1538 aa19.39■□□□□ 0.69
POLR2C-202ENST00000562599 CCDC88BA6NC98 1476 aa19.32■□□□□ 0.68
POLR2C-202ENST00000562599 DNAJC5BQ9UF47 199 aa19.09■□□□□ 0.65
POLR2C-202ENST00000562599 CHIC1Q5VXU3 224 aa19.07■□□□□ 0.64
POLR2C-202ENST00000562599 CFTRP13569 1480 aa18.95■□□□□ 0.62
POLR2C-202ENST00000562599 CADPSQ9ULU8 1353 aa18.93■□□□□ 0.62
POLR2C-202ENST00000562599 TRIM41Q8WV44 630 aa18.89■□□□□ 0.61
POLR2C-202ENST00000562599 PRDM2Q13029 1718 aa18.86■□□□□ 0.61
POLR2C-202ENST00000562599 ABCC8Q09428 1581 aa18.85■□□□□ 0.61
POLR2C-202ENST00000562599 LAMC3Q9Y6N6 1575 aa18.82■□□□□ 0.6
POLR2C-202ENST00000562599 NESP48681 1621 aa18.8■□□□□ 0.6
POLR2C-202ENST00000562599 WRNQ14191 1432 aaPredicted RBP eCLIP18.77■□□□□ 0.6
POLR2C-202ENST00000562599 FANCD2Q9BXW9 1451 aa18.72■□□□□ 0.59
POLR2C-202ENST00000562599 PDS5BQ9NTI5 1447 aa18.71■□□□□ 0.59
POLR2C-202ENST00000562599 SYNJ1O43426 1573 aa18.67■□□□□ 0.58
POLR2C-202ENST00000562599 CEP164Q9UPV0 1460 aa18.65■□□□□ 0.58
POLR2C-202ENST00000562599 TOP2BQ02880 1626 aa18.63■□□□□ 0.57
POLR2C-202ENST00000562599 BIVM-ERCC5R4GMW8 1640 aa18.61■□□□□ 0.57
POLR2C-202ENST00000562599 CUX1P39880 1505 aa18.61■□□□□ 0.57
POLR2C-202ENST00000562599 KIF21AQ7Z4S6 1674 aa18.59■□□□□ 0.57
POLR2C-202ENST00000562599 DNMBPQ6XZF7 1577 aa18.53■□□□□ 0.56
POLR2C-202ENST00000562599 FAM9AQ8IZU1 332 aaPredicted RBP18.53■□□□□ 0.56
POLR2C-202ENST00000562599 ERCC6Q03468 1493 aa18.51■□□□□ 0.55
POLR2C-202ENST00000562599 TOPBP1Q92547 1522 aa18.49■□□□□ 0.55
POLR2C-202ENST00000562599 URB2Q14146 1524 aaKnown RBP18.48■□□□□ 0.55
POLR2C-202ENST00000562599 MRC2Q9UBG0 1479 aa18.46■□□□□ 0.55
POLR2C-202ENST00000562599 SOGA1O94964 1423 aa18.46■□□□□ 0.55
POLR2C-202ENST00000562599 FGD5Q6ZNL6 1462 aa18.46■□□□□ 0.54
POLR2C-202ENST00000562599 EEA1Q15075 1411 aa18.43■□□□□ 0.54
POLR2C-202ENST00000562599 RUSC2Q8N2Y8 1516 aa18.39■□□□□ 0.53
POLR2C-202ENST00000562599 POLA1P09884 1462 aaPredicted RBP18.38■□□□□ 0.53
POLR2C-202ENST00000562599 CSRNP3Q8WYN3 585 aa18.35■□□□□ 0.53
POLR2C-202ENST00000562599 WDR62O43379 1518 aa18.34■□□□□ 0.53
POLR2C-202ENST00000562599 KIF27Q86VH2 1401 aa18.34■□□□□ 0.53
POLR2C-202ENST00000562599 LOC105371045A0A1W2PR82 267 aa18.34■□□□□ 0.53
POLR2C-202ENST00000562599 RAD54L2Q9Y4B4 1467 aa18.33■□□□□ 0.52
POLR2C-202ENST00000562599 CUX2O14529 1486 aa18.32■□□□□ 0.52
POLR2C-202ENST00000562599 THOC2Q8NI27 1593 aaKnown RBP18.31■□□□□ 0.52
POLR2C-202ENST00000562599 ABCA10Q8WWZ4 1543 aa18.28■□□□□ 0.52
POLR2C-202ENST00000562599 EHMT2Q96KQ7 1210 aa18.28■□□□□ 0.52
POLR2C-202ENST00000562599 WDR97A6NE52 1622 aa18.23■□□□□ 0.51
POLR2C-202ENST00000562599 TARBP1Q13395 1621 aaKnown RBP18.21■□□□□ 0.51
POLR2C-202ENST00000562599 IFT140Q96RY7 1462 aa18.2■□□□□ 0.5
POLR2C-202ENST00000562599 TDRD9Q8NDG6 1382 aaKnown RBP18.17■□□□□ 0.5
POLR2C-202ENST00000562599 KIF21BO75037 1637 aa18.17■□□□□ 0.5
POLR2C-202ENST00000562599 GOLGA3Q08378 1498 aa18.16■□□□□ 0.5
POLR2C-202ENST00000562599 IGF1RP08069 1367 aa18.16■□□□□ 0.5
POLR2C-202ENST00000562599 GAPVD1Q14C86 1478 aa18.14■□□□□ 0.5
POLR2C-202ENST00000562599 ABCA5Q8WWZ7 1642 aa18.14■□□□□ 0.49
POLR2C-202ENST00000562599 UBTFP17480 764 aaKnown RBP18.14■□□□□ 0.49
POLR2C-202ENST00000562599 PRXQ9BXM0 1461 aa18.12■□□□□ 0.49
POLR2C-202ENST00000562599 ERICH3Q5RHP9 1530 aa18.09■□□□□ 0.49
POLR2C-202ENST00000562599 AQRO60306 1485 aaKnown RBP eCLIP18.09■□□□□ 0.492e-6■■■□□ 15.1
POLR2C-202ENST00000562599 RAPGEF2Q9Y4G8 1499 aa18.09■□□□□ 0.49
POLR2C-202ENST00000562599 CARMIL1Q5VZK9 1371 aa18.09■□□□□ 0.49
POLR2C-202ENST00000562599 ZNF608Q9ULD9 1512 aaPredicted RBP18.07■□□□□ 0.48
POLR2C-202ENST00000562599 TNIKQ9UKE5 1360 aa18.06■□□□□ 0.48
POLR2C-202ENST00000562599 CUL7Q14999 1698 aa18.06■□□□□ 0.48
POLR2C-202ENST00000562599 PBRM1Q86U86 1689 aa18.05■□□□□ 0.48
POLR2C-202ENST00000562599 GRIN2BQ13224 1484 aa18.04■□□□□ 0.48
POLR2C-202ENST00000562599 EIF4G3O43432 1585 aaKnown RBP18.02■□□□□ 0.48
POLR2C-202ENST00000562599 FHAD1B1AJZ9 1412 aa17.95■□□□□ 0.46
POLR2C-202ENST00000562599 CEP162Q5TB80 1403 aa17.94■□□□□ 0.46
POLR2C-202ENST00000562599 SNAPC4Q5SXM2 1469 aa17.93■□□□□ 0.46
POLR2C-202ENST00000562599 ADAMTS12P58397 1594 aa17.92■□□□□ 0.46
POLR2C-202ENST00000562599 MAGI1Q96QZ7 1491 aaPredicted RBP17.9■□□□□ 0.46
POLR2C-202ENST00000562599 RANGAP1P46060 587 aaPredicted RBP17.89■□□□□ 0.45
POLR2C-202ENST00000562599 CLIP1P30622 1438 aa17.87■□□□□ 0.45
POLR2C-202ENST00000562599 CHMP7Q8WUX9 453 aaPredicted RBP17.84■□□□□ 0.45
POLR2C-202ENST00000562599 CTTNBP2Q8WZ74 1663 aa17.83■□□□□ 0.44
POLR2C-202ENST00000562599 SYNJ2O15056 1496 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms