RNA–Protein interactions for RNA: ENST00000562474.1

TSC2-218, Transcript of TSC complex subunit 2, humanhuman

TSL 5

Gene TSC2, Length 589 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-218ENST00000562474 NISCHQ9Y2I1 1504 aa27.16■■□□□ 1.94
TSC2-218ENST00000562474 CCDC180Q9P1Z9 1646 aa24.14■■□□□ 1.46
TSC2-218ENST00000562474 ABCC9O60706 1549 aa23.62■■□□□ 1.37
TSC2-218ENST00000562474 DCAF8L2P0C7V8 631 aa22.75■■□□□ 1.23
TSC2-218ENST00000562474 ZCCHC6Q5VYS8 1495 aaKnown RBP22.66■■□□□ 1.22
TSC2-218ENST00000562474 RB1CC1Q8TDY2 1594 aa22.64■■□□□ 1.22
TSC2-218ENST00000562474 NACADO15069 1562 aa22.59■■□□□ 1.21
TSC2-218ENST00000562474 UNC13AQ9UPW8 1703 aa22.39■■□□□ 1.17
TSC2-218ENST00000562474 MYO15BQ96JP2 1530 aa22.37■■□□□ 1.17
TSC2-218ENST00000562474 DCAF1Q9Y4B6 1507 aa22.36■■□□□ 1.17
TSC2-218ENST00000562474 SCRIBQ14160 1630 aa22.17■■□□□ 1.14
TSC2-218ENST00000562474 PABPN1Q86U42 306 aaKnown RBP eCLIP22.07■■□□□ 1.12
TSC2-218ENST00000562474 BICRAQ9NZM4 1560 aa22.04■■□□□ 1.12
TSC2-218ENST00000562474 SHROOM4Q9ULL8 1493 aa21.71■■□□□ 1.07
TSC2-218ENST00000562474 DNAJC5BQ9UF47 199 aa21.56■■□□□ 1.04
TSC2-218ENST00000562474 EIF4G1Q04637 1599 aaKnown RBP21.42■■□□□ 1.02
TSC2-218ENST00000562474 CC2D2AQ9P2K1 1620 aa21.36■■□□□ 1.01
TSC2-218ENST00000562474 CECR2Q9BXF3 1484 aa21.24■□□□□ 0.99
TSC2-218ENST00000562474 SMARCA4P51532 1647 aa21.13■□□□□ 0.97
TSC2-218ENST00000562474 BAZ1AQ9NRL2 1556 aaPredicted RBP21.03■□□□□ 0.96
TSC2-218ENST00000562474 MROH2BQ7Z745 1585 aa21.02■□□□□ 0.95
TSC2-218ENST00000562474 ATAD2BQ9ULI0 1458 aa20.91■□□□□ 0.94
TSC2-218ENST00000562474 WIZO95785 1651 aa20.88■□□□□ 0.93
TSC2-218ENST00000562474 SMARCA2P51531 1590 aa20.87■□□□□ 0.93
TSC2-218ENST00000562474 NCAPD3P42695 1498 aa20.81■□□□□ 0.92
TSC2-218ENST00000562474 PEG3Q9GZU2 1588 aa20.8■□□□□ 0.92
TSC2-218ENST00000562474 HMGXB3Q12766 1538 aa20.78■□□□□ 0.92
TSC2-218ENST00000562474 BAZ1BQ9UIG0 1483 aaKnown RBP20.77■□□□□ 0.92
TSC2-218ENST00000562474 RSF1Q96T23 1441 aaPredicted RBP20.73■□□□□ 0.91
TSC2-218ENST00000562474 TOP2AP11388 1531 aaKnown RBP20.53■□□□□ 0.88
TSC2-218ENST00000562474 NESP48681 1621 aa20.49■□□□□ 0.87
TSC2-218ENST00000562474 SUPT5HO00267 1087 aaKnown RBP20.38■□□□□ 0.85
TSC2-218ENST00000562474 KIF21AQ7Z4S6 1674 aa20.32■□□□□ 0.84
TSC2-218ENST00000562474 LAMC3Q9Y6N6 1575 aa20.31■□□□□ 0.84
TSC2-218ENST00000562474 CCDC88BA6NC98 1476 aa20.29■□□□□ 0.84
TSC2-218ENST00000562474 ERCC6Q03468 1493 aa20.29■□□□□ 0.84
TSC2-218ENST00000562474 CADPSQ9ULU8 1353 aa20.22■□□□□ 0.83
TSC2-218ENST00000562474 PRDM2Q13029 1718 aa20.21■□□□□ 0.83
TSC2-218ENST00000562474 CFTRP13569 1480 aa20.14■□□□□ 0.81
TSC2-218ENST00000562474 THOC2Q8NI27 1593 aaKnown RBP20.13■□□□□ 0.81
TSC2-218ENST00000562474 PDS5BQ9NTI5 1447 aa20.11■□□□□ 0.81
TSC2-218ENST00000562474 FANCD2Q9BXW9 1451 aa20.07■□□□□ 0.8
TSC2-218ENST00000562474 CEP164Q9UPV0 1460 aa20.04■□□□□ 0.8
TSC2-218ENST00000562474 MRC2Q9UBG0 1479 aa19.99■□□□□ 0.79
TSC2-218ENST00000562474 CUX2O14529 1486 aa19.93■□□□□ 0.78
TSC2-218ENST00000562474 WDR62O43379 1518 aa19.92■□□□□ 0.78
TSC2-218ENST00000562474 URB2Q14146 1524 aaKnown RBP19.92■□□□□ 0.78
TSC2-218ENST00000562474 TOPBP1Q92547 1522 aa19.78■□□□□ 0.76
TSC2-218ENST00000562474 DNMBPQ6XZF7 1577 aa19.77■□□□□ 0.76
TSC2-218ENST00000562474 ABCC8Q09428 1581 aa19.71■□□□□ 0.75
TSC2-218ENST00000562474 CUX1P39880 1505 aa19.71■□□□□ 0.75
TSC2-218ENST00000562474 SYNJ1O43426 1573 aa19.61■□□□□ 0.73
TSC2-218ENST00000562474 POLA1P09884 1462 aaPredicted RBP19.61■□□□□ 0.73
TSC2-218ENST00000562474 FGD5Q6ZNL6 1462 aa19.61■□□□□ 0.73
TSC2-218ENST00000562474 RAD54L2Q9Y4B4 1467 aa19.6■□□□□ 0.73
TSC2-218ENST00000562474 ZNF608Q9ULD9 1512 aaPredicted RBP19.59■□□□□ 0.73
TSC2-218ENST00000562474 TARBP1Q13395 1621 aaKnown RBP19.58■□□□□ 0.73
TSC2-218ENST00000562474 IFT140Q96RY7 1462 aa19.56■□□□□ 0.72
TSC2-218ENST00000562474 BIVM-ERCC5R4GMW8 1640 aa19.56■□□□□ 0.72
TSC2-218ENST00000562474 EIF4G3O43432 1585 aaKnown RBP19.54■□□□□ 0.72
TSC2-218ENST00000562474 WRNQ14191 1432 aaPredicted RBP eCLIP19.54■□□□□ 0.72
TSC2-218ENST00000562474 TOP2BQ02880 1626 aa19.53■□□□□ 0.72
TSC2-218ENST00000562474 WDR97A6NE52 1622 aa19.52■□□□□ 0.72
TSC2-218ENST00000562474 SOGA1O94964 1423 aa19.5■□□□□ 0.71
TSC2-218ENST00000562474 AQRO60306 1485 aaKnown RBP eCLIP19.46■□□□□ 0.71
TSC2-218ENST00000562474 TDRD9Q8NDG6 1382 aaKnown RBP19.43■□□□□ 0.7
TSC2-218ENST00000562474 PBRM1Q86U86 1689 aa19.41■□□□□ 0.7
TSC2-218ENST00000562474 CHD1O14646 1710 aa19.37■□□□□ 0.69
TSC2-218ENST00000562474 ABCA5Q8WWZ7 1642 aa19.35■□□□□ 0.69
TSC2-218ENST00000562474 ABCA10Q8WWZ4 1543 aa19.35■□□□□ 0.69
TSC2-218ENST00000562474 GAPVD1Q14C86 1478 aa19.29■□□□□ 0.68
TSC2-218ENST00000562474 SNAPC4Q5SXM2 1469 aa19.29■□□□□ 0.68
TSC2-218ENST00000562474 GRIN2BQ13224 1484 aa19.25■□□□□ 0.67
TSC2-218ENST00000562474 FBLN2P98095 1184 aa19.21■□□□□ 0.67
TSC2-218ENST00000562474 DNAJC5Q9H3Z4 198 aa19.21■□□□□ 0.67
TSC2-218ENST00000562474 MAGI1Q96QZ7 1491 aaPredicted RBP19.17■□□□□ 0.66
TSC2-218ENST00000562474 ADAMTS12P58397 1594 aa19.17■□□□□ 0.66
TSC2-218ENST00000562474 TRIM41Q8WV44 630 aa19.13■□□□□ 0.65
TSC2-218ENST00000562474 OSCARQ8IYS5 282 aa19.12■□□□□ 0.65
TSC2-218ENST00000562474 RUSC2Q8N2Y8 1516 aa19.11■□□□□ 0.65
TSC2-218ENST00000562474 SYNJ2O15056 1496 aa19.11■□□□□ 0.65
TSC2-218ENST00000562474 ERICH3Q5RHP9 1530 aa19.1■□□□□ 0.65
TSC2-218ENST00000562474 CHMP7Q8WUX9 453 aaPredicted RBP19.09■□□□□ 0.65
TSC2-218ENST00000562474 KIF27Q86VH2 1401 aa19.08■□□□□ 0.65
TSC2-218ENST00000562474 GRIN2AQ12879 1464 aa19.03■□□□□ 0.64
TSC2-218ENST00000562474 CUL7Q14999 1698 aa19.02■□□□□ 0.64
TSC2-218ENST00000562474 FHAD1B1AJZ9 1412 aa19.02■□□□□ 0.64
TSC2-218ENST00000562474 CEP170Q5SW79 1584 aa19.02■□□□□ 0.63
TSC2-218ENST00000562474 CLASP1Q7Z460 1538 aa19■□□□□ 0.63
TSC2-218ENST00000562474 CHIC1Q5VXU3 224 aa19■□□□□ 0.63
TSC2-218ENST00000562474 IGF1RP08069 1367 aa18.99■□□□□ 0.63
TSC2-218ENST00000562474 RIMBP3CA6NJZ7 1639 aa18.99■□□□□ 0.63
TSC2-218ENST00000562474 RIMBP3BA6NNM3 1639 aa18.99■□□□□ 0.63
TSC2-218ENST00000562474 RIMBP3Q9UFD9 1639 aa18.99■□□□□ 0.63
TSC2-218ENST00000562474 ARHGEF11O15085 1522 aa18.93■□□□□ 0.62
TSC2-218ENST00000562474 FAM9AQ8IZU1 332 aaPredicted RBP18.91■□□□□ 0.62
TSC2-218ENST00000562474 CARMIL1Q5VZK9 1371 aa18.91■□□□□ 0.62
TSC2-218ENST00000562474 NUP160Q12769 1436 aa18.91■□□□□ 0.62
TSC2-218ENST00000562474 ERCC6L2Q5T890 1561 aa18.87■□□□□ 0.61
TSC2-218ENST00000562474 SHROOM2Q13796 1616 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms