RNA–Protein interactions for RNA: ENST00000562458.2

ERN2-204, Transcript of endoplasmic reticulum to nucleus signaling 2, humanhuman

TSL 3

Gene ERN2, Length 759 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERN2-204ENST00000562458 NISCHQ9Y2I1 1504 aa45.9■■■■■ 4.94
ERN2-204ENST00000562458 ABCC9O60706 1549 aa40.79■■■■■ 4.12
ERN2-204ENST00000562458 CCDC180Q9P1Z9 1646 aa40.7■■■■■ 4.11
ERN2-204ENST00000562458 RB1CC1Q8TDY2 1594 aa38.78■■■■□ 3.8
ERN2-204ENST00000562458 NACADO15069 1562 aa38.44■■■■□ 3.74
ERN2-204ENST00000562458 DNAJC5BQ9UF47 199 aa38.39■■■■□ 3.74
ERN2-204ENST00000562458 DCAF8L2P0C7V8 631 aa38.27■■■■□ 3.72
ERN2-204ENST00000562458 ZCCHC6Q5VYS8 1495 aaKnown RBP38.26■■■■□ 3.72
ERN2-204ENST00000562458 MYO15BQ96JP2 1530 aa38.03■■■■□ 3.68
ERN2-204ENST00000562458 DCAF1Q9Y4B6 1507 aa37.94■■■■□ 3.66
ERN2-204ENST00000562458 PABPN1Q86U42 306 aaKnown RBP eCLIP37.93■■■■□ 3.66
ERN2-204ENST00000562458 UNC13AQ9UPW8 1703 aa37.8■■■■□ 3.64
ERN2-204ENST00000562458 BICRAQ9NZM4 1560 aa37.52■■■■□ 3.6
ERN2-204ENST00000562458 SCRIBQ14160 1630 aa37.21■■■■□ 3.55
ERN2-204ENST00000562458 SHROOM4Q9ULL8 1493 aa37.13■■■■□ 3.54
ERN2-204ENST00000562458 CC2D2AQ9P2K1 1620 aa36.83■■■■□ 3.49
ERN2-204ENST00000562458 CECR2Q9BXF3 1484 aa36.8■■■■□ 3.48
ERN2-204ENST00000562458 EIF4G1Q04637 1599 aaKnown RBP36.7■■■■□ 3.46
ERN2-204ENST00000562458 SMARCA4P51532 1647 aa35.59■■■■□ 3.29
ERN2-204ENST00000562458 DNAJC5Q9H3Z4 198 aa35.58■■■■□ 3.29
ERN2-204ENST00000562458 BAZ1AQ9NRL2 1556 aaPredicted RBP35.51■■■■□ 3.28
ERN2-204ENST00000562458 NCAPD3P42695 1498 aa35.44■■■■□ 3.26
ERN2-204ENST00000562458 MROH2BQ7Z745 1585 aa35.43■■■■□ 3.26
ERN2-204ENST00000562458 ATAD2BQ9ULI0 1458 aa35.37■■■■□ 3.25
ERN2-204ENST00000562458 ERCC6Q03468 1493 aa35.33■■■■□ 3.25
ERN2-204ENST00000562458 CUX2O14529 1486 aa35.32■■■■□ 3.24
ERN2-204ENST00000562458 SMARCA2P51531 1590 aa35.25■■■■□ 3.23
ERN2-204ENST00000562458 PEG3Q9GZU2 1588 aa35.22■■■■□ 3.23
ERN2-204ENST00000562458 HMGXB3Q12766 1538 aa35.16■■■■□ 3.22
ERN2-204ENST00000562458 WIZO95785 1651 aa35.06■■■■□ 3.2
ERN2-204ENST00000562458 RSF1Q96T23 1441 aaPredicted RBP35.05■■■■□ 3.2
ERN2-204ENST00000562458 BAZ1BQ9UIG0 1483 aaKnown RBP35.03■■■■□ 3.2
ERN2-204ENST00000562458 NESP48681 1621 aa34.91■■■■□ 3.18
ERN2-204ENST00000562458 LAMC3Q9Y6N6 1575 aa34.74■■■■□ 3.15
ERN2-204ENST00000562458 THOC2Q8NI27 1593 aaKnown RBP34.63■■■■□ 3.13
ERN2-204ENST00000562458 TOP2AP11388 1531 aaKnown RBP34.62■■■■□ 3.13
ERN2-204ENST00000562458 PDS5BQ9NTI5 1447 aa34.58■■■■□ 3.13
ERN2-204ENST00000562458 KIF21AQ7Z4S6 1674 aa34.5■■■■□ 3.11
ERN2-204ENST00000562458 CADPSQ9ULU8 1353 aa34.37■■■■□ 3.09
ERN2-204ENST00000562458 CCDC88BA6NC98 1476 aa34.26■■■■□ 3.07
ERN2-204ENST00000562458 MRC2Q9UBG0 1479 aa34.24■■■■□ 3.07
ERN2-204ENST00000562458 SUPT5HO00267 1087 aaKnown RBP34.23■■■■□ 3.07
ERN2-204ENST00000562458 WDR62O43379 1518 aa34.13■■■■□ 3.05
ERN2-204ENST00000562458 CFTRP13569 1480 aa34.12■■■■□ 3.05
ERN2-204ENST00000562458 CEP164Q9UPV0 1460 aa34.07■■■■□ 3.05
ERN2-204ENST00000562458 FANCD2Q9BXW9 1451 aa33.98■■■■□ 3.03
ERN2-204ENST00000562458 TRIM41Q8WV44 630 aa33.96■■■■□ 3.03
ERN2-204ENST00000562458 PRDM2Q13029 1718 aa33.86■■■■□ 3.01
ERN2-204ENST00000562458 OSCARQ8IYS5 282 aa33.71■■■□□ 2.99
ERN2-204ENST00000562458 URB2Q14146 1524 aaKnown RBP33.66■■■□□ 2.98
ERN2-204ENST00000562458 IFT140Q96RY7 1462 aa33.4■■■□□ 2.94
ERN2-204ENST00000562458 TOPBP1Q92547 1522 aa33.38■■■□□ 2.93
ERN2-204ENST00000562458 ABCC8Q09428 1581 aa33.32■■■□□ 2.92
ERN2-204ENST00000562458 DNMBPQ6XZF7 1577 aa33.32■■■□□ 2.92
ERN2-204ENST00000562458 ZNF608Q9ULD9 1512 aaPredicted RBP33.28■■■□□ 2.92
ERN2-204ENST00000562458 CUX1P39880 1505 aa33.22■■■□□ 2.91
ERN2-204ENST00000562458 RIMBP3CA6NJZ7 1639 aa33.21■■■□□ 2.91
ERN2-204ENST00000562458 RIMBP3BA6NNM3 1639 aa33.21■■■□□ 2.91
ERN2-204ENST00000562458 RIMBP3Q9UFD9 1639 aa33.21■■■□□ 2.91
ERN2-204ENST00000562458 EIF4G3O43432 1585 aaKnown RBP33.13■■■□□ 2.89
ERN2-204ENST00000562458 POLA1P09884 1462 aaPredicted RBP33.11■■■□□ 2.89
ERN2-204ENST00000562458 ARHGEF11O15085 1522 aa33.07■■■□□ 2.89
ERN2-204ENST00000562458 FGD5Q6ZNL6 1462 aa33.05■■■□□ 2.88
ERN2-204ENST00000562458 TARBP1Q13395 1621 aaKnown RBP33.03■■■□□ 2.88
ERN2-204ENST00000562458 RAD54L2Q9Y4B4 1467 aa33■■■□□ 2.87
ERN2-204ENST00000562458 WRNQ14191 1432 aaPredicted RBP eCLIP32.98■■■□□ 2.87
ERN2-204ENST00000562458 AQRO60306 1485 aaKnown RBP eCLIP32.98■■■□□ 2.87
ERN2-204ENST00000562458 SYNJ1O43426 1573 aa32.96■■■□□ 2.87
ERN2-204ENST00000562458 SOGA1O94964 1423 aa32.96■■■□□ 2.87
ERN2-204ENST00000562458 CHD1O14646 1710 aa32.94■■■□□ 2.86
ERN2-204ENST00000562458 FBLN2P98095 1184 aa32.93■■■□□ 2.86
ERN2-204ENST00000562458 BIVM-ERCC5R4GMW8 1640 aa32.92■■■□□ 2.86
ERN2-204ENST00000562458 TOP2BQ02880 1626 aa32.91■■■□□ 2.86
ERN2-204ENST00000562458 CYB5RLQ6IPT4 315 aa32.91■■■□□ 2.86
ERN2-204ENST00000562458 WDR97A6NE52 1622 aa32.79■■■□□ 2.84
ERN2-204ENST00000562458 TDRD9Q8NDG6 1382 aaKnown RBP32.79■■■□□ 2.84
ERN2-204ENST00000562458 ABCA10Q8WWZ4 1543 aa32.72■■■□□ 2.83
ERN2-204ENST00000562458 TRHP20396 242 aaPredicted RBP32.71■■■□□ 2.83
ERN2-204ENST00000562458 ARAP1Q96P48 1450 aa32.7■■■□□ 2.83
ERN2-204ENST00000562458 SNAPC4Q5SXM2 1469 aa32.66■■■□□ 2.82
ERN2-204ENST00000562458 CHMP7Q8WUX9 453 aaPredicted RBP32.65■■■□□ 2.82
ERN2-204ENST00000562458 MAGI1Q96QZ7 1491 aaPredicted RBP32.6■■■□□ 2.81
ERN2-204ENST00000562458 ABCA5Q8WWZ7 1642 aa32.59■■■□□ 2.81
ERN2-204ENST00000562458 GAPVD1Q14C86 1478 aa32.57■■■□□ 2.8
ERN2-204ENST00000562458 GRIN2BQ13224 1484 aa32.56■■■□□ 2.8
ERN2-204ENST00000562458 CLASP1Q7Z460 1538 aa32.52■■■□□ 2.8
ERN2-204ENST00000562458 PBRM1Q86U86 1689 aa32.52■■■□□ 2.8
ERN2-204ENST00000562458 SYNJ2O15056 1496 aa32.48■■■□□ 2.79
ERN2-204ENST00000562458 ERICH3Q5RHP9 1530 aa32.3■■■□□ 2.76
ERN2-204ENST00000562458 ADAMTS12P58397 1594 aa32.26■■■□□ 2.75
ERN2-204ENST00000562458 KIF27Q86VH2 1401 aa32.25■■■□□ 2.75
ERN2-204ENST00000562458 IGF1RP08069 1367 aa32.19■■■□□ 2.74
ERN2-204ENST00000562458 FHAD1B1AJZ9 1412 aa32.18■■■□□ 2.74
ERN2-204ENST00000562458 RUSC2Q8N2Y8 1516 aa32.16■■■□□ 2.74
ERN2-204ENST00000562458 GRIN2AQ12879 1464 aa32.13■■■□□ 2.73
ERN2-204ENST00000562458 CHIC1Q5VXU3 224 aa32.06■■■□□ 2.72
ERN2-204ENST00000562458 AEBP2Q6ZN18 517 aaPredicted RBP32.02■■■□□ 2.72
ERN2-204ENST00000562458 CEP170Q5SW79 1584 aa32.02■■■□□ 2.72
ERN2-204ENST00000562458 CUL7Q14999 1698 aa32.02■■■□□ 2.72
ERN2-204ENST00000562458 NUP160Q12769 1436 aa32■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms