RNA–Protein interactions for RNA: ENST00000562327.5

SCAMP5-204, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 4

Gene SCAMP5, Length 579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-204ENST00000562327 NISCHQ9Y2I1 1504 aa49.58■■■■■ 5.53
SCAMP5-204ENST00000562327 CCDC180Q9P1Z9 1646 aa44.37■■■■■ 4.69
SCAMP5-204ENST00000562327 ABCC9O60706 1549 aa44.09■■■■■ 4.65
SCAMP5-204ENST00000562327 RB1CC1Q8TDY2 1594 aa42.05■■■■■ 4.32
SCAMP5-204ENST00000562327 NACADO15069 1562 aa41.85■■■■■ 4.29
SCAMP5-204ENST00000562327 DCAF8L2P0C7V8 631 aa41.48■■■■■ 4.23
SCAMP5-204ENST00000562327 MYO15BQ96JP2 1530 aa41.44■■■■■ 4.22
SCAMP5-204ENST00000562327 ZCCHC6Q5VYS8 1495 aaKnown RBP41.2■■■■■ 4.19
SCAMP5-204ENST00000562327 UNC13AQ9UPW8 1703 aa41.19■■■■■ 4.18
SCAMP5-204ENST00000562327 DNAJC5BQ9UF47 199 aa41.19■■■■■ 4.18
SCAMP5-204ENST00000562327 PABPN1Q86U42 306 aaKnown RBP eCLIP41.04■■■■■ 4.16
SCAMP5-204ENST00000562327 DCAF1Q9Y4B6 1507 aa40.99■■■■■ 4.15
SCAMP5-204ENST00000562327 BICRAQ9NZM4 1560 aa40.96■■■■■ 4.15
SCAMP5-204ENST00000562327 SCRIBQ14160 1630 aa40.43■■■■■ 4.06
SCAMP5-204ENST00000562327 SHROOM4Q9ULL8 1493 aa40.36■■■■■ 4.05
SCAMP5-204ENST00000562327 CC2D2AQ9P2K1 1620 aa39.87■■■■□ 3.97
SCAMP5-204ENST00000562327 EIF4G1Q04637 1599 aaKnown RBP39.86■■■■□ 3.97
SCAMP5-204ENST00000562327 CECR2Q9BXF3 1484 aa39.68■■■■□ 3.94
SCAMP5-204ENST00000562327 NCAPD3P42695 1498 aa38.67■■■■□ 3.78
SCAMP5-204ENST00000562327 SMARCA4P51532 1647 aa38.63■■■■□ 3.77
SCAMP5-204ENST00000562327 ATAD2BQ9ULI0 1458 aa38.6■■■■□ 3.77
SCAMP5-204ENST00000562327 SMARCA2P51531 1590 aa38.44■■■■□ 3.74
SCAMP5-204ENST00000562327 BAZ1AQ9NRL2 1556 aaPredicted RBP38.44■■■■□ 3.74
SCAMP5-204ENST00000562327 HMGXB3Q12766 1538 aa38.43■■■■□ 3.74
SCAMP5-204ENST00000562327 PEG3Q9GZU2 1588 aa38.3■■■■□ 3.72
SCAMP5-204ENST00000562327 MROH2BQ7Z745 1585 aa38.23■■■■□ 3.71
SCAMP5-204ENST00000562327 BAZ1BQ9UIG0 1483 aaKnown RBP38.18■■■■□ 3.7
SCAMP5-204ENST00000562327 NESP48681 1621 aa38■■■■□ 3.67
SCAMP5-204ENST00000562327 ERCC6Q03468 1493 aa37.96■■■■□ 3.67
SCAMP5-204ENST00000562327 CUX2O14529 1486 aa37.89■■■■□ 3.66
SCAMP5-204ENST00000562327 WIZO95785 1651 aa37.76■■■■□ 3.64
SCAMP5-204ENST00000562327 LAMC3Q9Y6N6 1575 aa37.72■■■■□ 3.63
SCAMP5-204ENST00000562327 THOC2Q8NI27 1593 aaKnown RBP37.6■■■■□ 3.61
SCAMP5-204ENST00000562327 DNAJC5Q9H3Z4 198 aa37.53■■■■□ 3.6
SCAMP5-204ENST00000562327 RSF1Q96T23 1441 aaPredicted RBP37.52■■■■□ 3.6
SCAMP5-204ENST00000562327 KIF21AQ7Z4S6 1674 aa37.5■■■■□ 3.59
SCAMP5-204ENST00000562327 CADPSQ9ULU8 1353 aa37.47■■■■□ 3.59
SCAMP5-204ENST00000562327 PDS5BQ9NTI5 1447 aa37.44■■■■□ 3.58
SCAMP5-204ENST00000562327 TOP2AP11388 1531 aaKnown RBP37.31■■■■□ 3.56
SCAMP5-204ENST00000562327 MRC2Q9UBG0 1479 aa37.16■■■■□ 3.54
SCAMP5-204ENST00000562327 CFTRP13569 1480 aa37.14■■■■□ 3.54
SCAMP5-204ENST00000562327 WDR62O43379 1518 aa37.12■■■■□ 3.53
SCAMP5-204ENST00000562327 FANCD2Q9BXW9 1451 aa37.05■■■■□ 3.52
SCAMP5-204ENST00000562327 CEP164Q9UPV0 1460 aa37.04■■■■□ 3.52
SCAMP5-204ENST00000562327 CCDC88BA6NC98 1476 aa36.87■■■■□ 3.49
SCAMP5-204ENST00000562327 URB2Q14146 1524 aaKnown RBP36.79■■■■□ 3.48
SCAMP5-204ENST00000562327 PRDM2Q13029 1718 aa36.76■■■■□ 3.47
SCAMP5-204ENST00000562327 TOPBP1Q92547 1522 aa36.41■■■■□ 3.42
SCAMP5-204ENST00000562327 IFT140Q96RY7 1462 aa36.31■■■■□ 3.4
SCAMP5-204ENST00000562327 ZNF608Q9ULD9 1512 aaPredicted RBP36.29■■■■□ 3.4
SCAMP5-204ENST00000562327 DNMBPQ6XZF7 1577 aa36.28■■■■□ 3.4
SCAMP5-204ENST00000562327 ABCC8Q09428 1581 aa36.24■■■■□ 3.39
SCAMP5-204ENST00000562327 TARBP1Q13395 1621 aaKnown RBP36.1■■■■□ 3.37
SCAMP5-204ENST00000562327 EIF4G3O43432 1585 aaKnown RBP36.1■■■■□ 3.37
SCAMP5-204ENST00000562327 OSCARQ8IYS5 282 aa36.08■■■■□ 3.37
SCAMP5-204ENST00000562327 POLA1P09884 1462 aaPredicted RBP36.06■■■■□ 3.36
SCAMP5-204ENST00000562327 AQRO60306 1485 aaKnown RBP eCLIP35.94■■■■□ 3.34
SCAMP5-204ENST00000562327 RAD54L2Q9Y4B4 1467 aa35.91■■■■□ 3.34
SCAMP5-204ENST00000562327 CUX1P39880 1505 aa35.9■■■■□ 3.34
SCAMP5-204ENST00000562327 TRIM41Q8WV44 630 aa35.9■■■■□ 3.34
SCAMP5-204ENST00000562327 SUPT5HO00267 1087 aaKnown RBP35.87■■■■□ 3.33
SCAMP5-204ENST00000562327 FGD5Q6ZNL6 1462 aa35.86■■■■□ 3.33
SCAMP5-204ENST00000562327 SOGA1O94964 1423 aa35.82■■■■□ 3.32
SCAMP5-204ENST00000562327 TDRD9Q8NDG6 1382 aaKnown RBP35.74■■■■□ 3.31
SCAMP5-204ENST00000562327 CHD1O14646 1710 aa35.74■■■■□ 3.31
SCAMP5-204ENST00000562327 RIMBP3CA6NJZ7 1639 aa35.72■■■■□ 3.31
SCAMP5-204ENST00000562327 RIMBP3BA6NNM3 1639 aa35.72■■■■□ 3.31
SCAMP5-204ENST00000562327 RIMBP3Q9UFD9 1639 aa35.72■■■■□ 3.31
SCAMP5-204ENST00000562327 WDR97A6NE52 1622 aa35.69■■■■□ 3.3
SCAMP5-204ENST00000562327 ARHGEF11O15085 1522 aa35.65■■■■□ 3.3
SCAMP5-204ENST00000562327 SNAPC4Q5SXM2 1469 aa35.6■■■■□ 3.29
SCAMP5-204ENST00000562327 GRIN2BQ13224 1484 aa35.5■■■■□ 3.27
SCAMP5-204ENST00000562327 MAGI1Q96QZ7 1491 aaPredicted RBP35.49■■■■□ 3.27
SCAMP5-204ENST00000562327 ABCA10Q8WWZ4 1543 aa35.48■■■■□ 3.27
SCAMP5-204ENST00000562327 FBLN2P98095 1184 aa35.48■■■■□ 3.27
SCAMP5-204ENST00000562327 ABCA5Q8WWZ7 1642 aa35.44■■■■□ 3.26
SCAMP5-204ENST00000562327 PBRM1Q86U86 1689 aa35.41■■■■□ 3.26
SCAMP5-204ENST00000562327 CLASP1Q7Z460 1538 aa35.41■■■■□ 3.26
SCAMP5-204ENST00000562327 GAPVD1Q14C86 1478 aa35.41■■■■□ 3.26
SCAMP5-204ENST00000562327 BIVM-ERCC5R4GMW8 1640 aa35.39■■■■□ 3.26
SCAMP5-204ENST00000562327 SYNJ1O43426 1573 aa35.38■■■■□ 3.25
SCAMP5-204ENST00000562327 SYNJ2O15056 1496 aa35.37■■■■□ 3.25
SCAMP5-204ENST00000562327 TOP2BQ02880 1626 aa35.37■■■■□ 3.25
SCAMP5-204ENST00000562327 ARAP1Q96P48 1450 aa35.35■■■■□ 3.25
SCAMP5-204ENST00000562327 WRNQ14191 1432 aaPredicted RBP eCLIP35.33■■■■□ 3.25
SCAMP5-204ENST00000562327 CHMP7Q8WUX9 453 aaPredicted RBP35.29■■■■□ 3.24
SCAMP5-204ENST00000562327 CYB5RLQ6IPT4 315 aa35.23■■■■□ 3.23
SCAMP5-204ENST00000562327 ADAMTS12P58397 1594 aa35.14■■■■□ 3.22
SCAMP5-204ENST00000562327 GRIN2AQ12879 1464 aa35.08■■■■□ 3.21
SCAMP5-204ENST00000562327 ERICH3Q5RHP9 1530 aa35.01■■■■□ 3.2
SCAMP5-204ENST00000562327 NUP160Q12769 1436 aa34.99■■■■□ 3.19
SCAMP5-204ENST00000562327 CEP170Q5SW79 1584 aa34.99■■■■□ 3.19
SCAMP5-204ENST00000562327 FHAD1B1AJZ9 1412 aa34.98■■■■□ 3.19
SCAMP5-204ENST00000562327 ERCC6L2Q5T890 1561 aa34.89■■■■□ 3.18
SCAMP5-204ENST00000562327 SHROOM2Q13796 1616 aa34.82■■■■□ 3.16
SCAMP5-204ENST00000562327 TRHP20396 242 aaPredicted RBP34.67■■■■□ 3.14
SCAMP5-204ENST00000562327 RUSC2Q8N2Y8 1516 aa34.65■■■■□ 3.14
SCAMP5-204ENST00000562327 IGF1RP08069 1367 aa34.62■■■■□ 3.13
SCAMP5-204ENST00000562327 KIF27Q86VH2 1401 aa34.6■■■■□ 3.13
SCAMP5-204ENST00000562327 PRG4Q92954 1404 aaPredicted RBP34.55■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms