RNA–Protein interactions for RNA: ENST00000562325.5

CDH11-203, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-203ENST00000562325 NISCHQ9Y2I1 1504 aa48.99■■■■■ 5.43
CDH11-203ENST00000562325 ABCC9O60706 1549 aa44.14■■■■■ 4.66
CDH11-203ENST00000562325 CCDC180Q9P1Z9 1646 aa44.1■■■■■ 4.65
CDH11-203ENST00000562325 RB1CC1Q8TDY2 1594 aa42.07■■■■■ 4.33
CDH11-203ENST00000562325 NACADO15069 1562 aa41.78■■■■■ 4.28
CDH11-203ENST00000562325 DNAJC5BQ9UF47 199 aa41.58■■■■■ 4.25
CDH11-203ENST00000562325 MYO15BQ96JP2 1530 aa41.26■■■■■ 4.2
CDH11-203ENST00000562325 DCAF8L2P0C7V8 631 aa41.22■■■■■ 4.19
CDH11-203ENST00000562325 PABPN1Q86U42 306 aaKnown RBP eCLIP41.01■■■■■ 4.16
CDH11-203ENST00000562325 UNC13AQ9UPW8 1703 aa40.94■■■■■ 4.14
CDH11-203ENST00000562325 BICRAQ9NZM4 1560 aa40.78■■■■■ 4.12
CDH11-203ENST00000562325 DCAF1Q9Y4B6 1507 aa40.59■■■■■ 4.09
CDH11-203ENST00000562325 ZCCHC6Q5VYS8 1495 aaKnown RBP40.57■■■■■ 4.08
CDH11-203ENST00000562325 SHROOM4Q9ULL8 1493 aa40.48■■■■■ 4.07
CDH11-203ENST00000562325 SCRIBQ14160 1630 aa39.98■■■■□ 3.99
CDH11-203ENST00000562325 CC2D2AQ9P2K1 1620 aa39.91■■■■□ 3.98
CDH11-203ENST00000562325 CECR2Q9BXF3 1484 aa39.88■■■■□ 3.97
CDH11-203ENST00000562325 EIF4G1Q04637 1599 aaKnown RBP39.82■■■■□ 3.97
CDH11-203ENST00000562325 NCAPD3P42695 1498 aa38.58■■■■□ 3.77
CDH11-203ENST00000562325 DNAJC5Q9H3Z4 198 aa38.5■■■■□ 3.75
CDH11-203ENST00000562325 ATAD2BQ9ULI0 1458 aa38.35■■■■□ 3.73
CDH11-203ENST00000562325 CUX2O14529 1486 aa38.34■■■■□ 3.73
CDH11-203ENST00000562325 SMARCA2P51531 1590 aa38.3■■■■□ 3.72
CDH11-203ENST00000562325 HMGXB3Q12766 1538 aa38.27■■■■□ 3.72
CDH11-203ENST00000562325 SMARCA4P51532 1647 aa38.22■■■■□ 3.71
CDH11-203ENST00000562325 ERCC6Q03468 1493 aa38.2■■■■□ 3.71
CDH11-203ENST00000562325 BAZ1AQ9NRL2 1556 aaPredicted RBP38.07■■■■□ 3.69
CDH11-203ENST00000562325 PEG3Q9GZU2 1588 aa37.98■■■■□ 3.67
CDH11-203ENST00000562325 BAZ1BQ9UIG0 1483 aaKnown RBP37.96■■■■□ 3.67
CDH11-203ENST00000562325 NESP48681 1621 aa37.83■■■■□ 3.65
CDH11-203ENST00000562325 LAMC3Q9Y6N6 1575 aa37.72■■■■□ 3.63
CDH11-203ENST00000562325 MROH2BQ7Z745 1585 aa37.66■■■■□ 3.62
CDH11-203ENST00000562325 THOC2Q8NI27 1593 aaKnown RBP37.59■■■■□ 3.61
CDH11-203ENST00000562325 PDS5BQ9NTI5 1447 aa37.53■■■■□ 3.6
CDH11-203ENST00000562325 CADPSQ9ULU8 1353 aa37.35■■■■□ 3.57
CDH11-203ENST00000562325 KIF21AQ7Z4S6 1674 aa37.34■■■■□ 3.57
CDH11-203ENST00000562325 MRC2Q9UBG0 1479 aa37.16■■■■□ 3.54
CDH11-203ENST00000562325 WIZO95785 1651 aa37.13■■■■□ 3.53
CDH11-203ENST00000562325 WDR62O43379 1518 aa37.09■■■■□ 3.53
CDH11-203ENST00000562325 CEP164Q9UPV0 1460 aa36.96■■■■□ 3.51
CDH11-203ENST00000562325 CFTRP13569 1480 aa36.9■■■■□ 3.5
CDH11-203ENST00000562325 FANCD2Q9BXW9 1451 aa36.88■■■■□ 3.49
CDH11-203ENST00000562325 RSF1Q96T23 1441 aaPredicted RBP36.85■■■■□ 3.49
CDH11-203ENST00000562325 TOP2AP11388 1531 aaKnown RBP36.79■■■■□ 3.48
CDH11-203ENST00000562325 URB2Q14146 1524 aaKnown RBP36.56■■■■□ 3.44
CDH11-203ENST00000562325 TRIM41Q8WV44 630 aa36.52■■■■□ 3.44
CDH11-203ENST00000562325 OSCARQ8IYS5 282 aa36.48■■■■□ 3.43
CDH11-203ENST00000562325 PRDM2Q13029 1718 aa36.42■■■■□ 3.42
CDH11-203ENST00000562325 CCDC88BA6NC98 1476 aa36.32■■■■□ 3.41
CDH11-203ENST00000562325 IFT140Q96RY7 1462 aa36.27■■■■□ 3.4
CDH11-203ENST00000562325 ABCC8Q09428 1581 aa36.19■■■■□ 3.38
CDH11-203ENST00000562325 TOPBP1Q92547 1522 aa36.15■■■■□ 3.38
CDH11-203ENST00000562325 ZNF608Q9ULD9 1512 aaPredicted RBP36.1■■■■□ 3.37
CDH11-203ENST00000562325 DNMBPQ6XZF7 1577 aa36.02■■■■□ 3.36
CDH11-203ENST00000562325 RIMBP3CA6NJZ7 1639 aa35.94■■■■□ 3.34
CDH11-203ENST00000562325 RIMBP3BA6NNM3 1639 aa35.94■■■■□ 3.34
CDH11-203ENST00000562325 RIMBP3Q9UFD9 1639 aa35.94■■■■□ 3.34
CDH11-203ENST00000562325 EIF4G3O43432 1585 aaKnown RBP35.93■■■■□ 3.34
CDH11-203ENST00000562325 ARHGEF11O15085 1522 aa35.86■■■■□ 3.33
CDH11-203ENST00000562325 TARBP1Q13395 1621 aaKnown RBP35.84■■■■□ 3.33
CDH11-203ENST00000562325 POLA1P09884 1462 aaPredicted RBP35.78■■■■□ 3.32
CDH11-203ENST00000562325 AQRO60306 1485 aaKnown RBP eCLIP35.75■■■■□ 3.31
CDH11-203ENST00000562325 WDR97A6NE52 1622 aa35.63■■■■□ 3.29
CDH11-203ENST00000562325 CHD1O14646 1710 aa35.63■■■■□ 3.29
CDH11-203ENST00000562325 SOGA1O94964 1423 aa35.6■■■■□ 3.29
CDH11-203ENST00000562325 RAD54L2Q9Y4B4 1467 aa35.55■■■■□ 3.28
CDH11-203ENST00000562325 CYB5RLQ6IPT4 315 aa35.54■■■■□ 3.28
CDH11-203ENST00000562325 FBLN2P98095 1184 aa35.51■■■■□ 3.28
CDH11-203ENST00000562325 TDRD9Q8NDG6 1382 aaKnown RBP35.5■■■■□ 3.27
CDH11-203ENST00000562325 FGD5Q6ZNL6 1462 aa35.48■■■■□ 3.27
CDH11-203ENST00000562325 ARAP1Q96P48 1450 aa35.47■■■■□ 3.27
CDH11-203ENST00000562325 MAGI1Q96QZ7 1491 aaPredicted RBP35.43■■■■□ 3.26
CDH11-203ENST00000562325 CUX1P39880 1505 aa35.41■■■■□ 3.26
CDH11-203ENST00000562325 SNAPC4Q5SXM2 1469 aa35.41■■■■□ 3.26
CDH11-203ENST00000562325 GRIN2BQ13224 1484 aa35.37■■■■□ 3.25
CDH11-203ENST00000562325 CLASP1Q7Z460 1538 aa35.34■■■■□ 3.25
CDH11-203ENST00000562325 CHMP7Q8WUX9 453 aaPredicted RBP35.32■■■■□ 3.24
CDH11-203ENST00000562325 SYNJ1O43426 1573 aa35.32■■■■□ 3.24
CDH11-203ENST00000562325 SYNJ2O15056 1496 aa35.29■■■■□ 3.24
CDH11-203ENST00000562325 TRHP20396 242 aaPredicted RBP35.19■■■■□ 3.22
CDH11-203ENST00000562325 GAPVD1Q14C86 1478 aa35.18■■■■□ 3.22
CDH11-203ENST00000562325 ABCA10Q8WWZ4 1543 aa35.16■■■■□ 3.22
CDH11-203ENST00000562325 PBRM1Q86U86 1689 aa35.08■■■■□ 3.21
CDH11-203ENST00000562325 ABCA5Q8WWZ7 1642 aa35.07■■■■□ 3.21
CDH11-203ENST00000562325 WRNQ14191 1432 aaPredicted RBP eCLIP34.98■■■■□ 3.19
CDH11-203ENST00000562325 GRIN2AQ12879 1464 aa34.89■■■■□ 3.18
CDH11-203ENST00000562325 SUPT5HO00267 1087 aaKnown RBP34.88■■■■□ 3.17
CDH11-203ENST00000562325 TOP2BQ02880 1626 aa34.84■■■■□ 3.17
CDH11-203ENST00000562325 NUP160Q12769 1436 aa34.82■■■■□ 3.17
CDH11-203ENST00000562325 BIVM-ERCC5R4GMW8 1640 aa34.82■■■■□ 3.16
CDH11-203ENST00000562325 ADAMTS12P58397 1594 aa34.81■■■■□ 3.16
CDH11-203ENST00000562325 FHAD1B1AJZ9 1412 aa34.77■■■■□ 3.16
CDH11-203ENST00000562325 ERICH3Q5RHP9 1530 aa34.73■■■■□ 3.15
CDH11-203ENST00000562325 CEP170Q5SW79 1584 aa34.7■■■■□ 3.15
CDH11-203ENST00000562325 SHROOM2Q13796 1616 aa34.66■■■■□ 3.14
CDH11-203ENST00000562325 ERCC6L2Q5T890 1561 aa34.63■■■■□ 3.13
CDH11-203ENST00000562325 PRG4Q92954 1404 aaPredicted RBP34.43■■■■□ 3.1
CDH11-203ENST00000562325 JPH4Q96JJ6 628 aa34.41■■■■□ 3.1
CDH11-203ENST00000562325 AEBP2Q6ZN18 517 aaPredicted RBP34.37■■■■□ 3.09
CDH11-203ENST00000562325 RUSC2Q8N2Y8 1516 aa34.33■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms