RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 NISCHQ9Y2I1 1504 aa26.09■■□□□ 1.77
BBS4-205ENST00000562219 CCDC180Q9P1Z9 1646 aa23.59■■□□□ 1.37
BBS4-205ENST00000562219 ABCC9O60706 1549 aa23.55■■□□□ 1.36
BBS4-205ENST00000562219 RB1CC1Q8TDY2 1594 aa22.44■■□□□ 1.18
BBS4-205ENST00000562219 NACADO15069 1562 aa22.25■■□□□ 1.15
BBS4-205ENST00000562219 DNAJC5BQ9UF47 199 aa22.12■■□□□ 1.13
BBS4-205ENST00000562219 UNC13AQ9UPW8 1703 aa22.04■■□□□ 1.12
BBS4-205ENST00000562219 DCAF8L2P0C7V8 631 aa21.93■■□□□ 1.1
BBS4-205ENST00000562219 MYO15BQ96JP2 1530 aa21.9■■□□□ 1.1
BBS4-205ENST00000562219 PABPN1Q86U42 306 aaKnown RBP eCLIP21.82■■□□□ 1.08
BBS4-205ENST00000562219 BICRAQ9NZM4 1560 aa21.78■■□□□ 1.08
BBS4-205ENST00000562219 ZCCHC6Q5VYS8 1495 aaKnown RBP21.61■■□□□ 1.05
BBS4-205ENST00000562219 DCAF1Q9Y4B6 1507 aa21.57■■□□□ 1.04
BBS4-205ENST00000562219 SHROOM4Q9ULL8 1493 aa21.5■■□□□ 1.03
BBS4-205ENST00000562219 SCRIBQ14160 1630 aa21.4■■□□□ 1.02
BBS4-205ENST00000562219 CC2D2AQ9P2K1 1620 aa21.33■■□□□ 1.01
BBS4-205ENST00000562219 EIF4G1Q04637 1599 aaKnown RBP21.26■□□□□ 0.99
BBS4-205ENST00000562219 CECR2Q9BXF3 1484 aa21.24■□□□□ 0.99
BBS4-205ENST00000562219 NCAPD3P42695 1498 aa20.49■□□□□ 0.87
BBS4-205ENST00000562219 DNAJC5Q9H3Z4 198 aa20.43■□□□□ 0.86
BBS4-205ENST00000562219 SMARCA4P51532 1647 aa20.42■□□□□ 0.86
BBS4-205ENST00000562219 ATAD2BQ9ULI0 1458 aa20.4■□□□□ 0.86
BBS4-205ENST00000562219 SMARCA2P51531 1590 aa20.39■□□□□ 0.85
BBS4-205ENST00000562219 HMGXB3Q12766 1538 aa20.39■□□□□ 0.85
BBS4-205ENST00000562219 CUX2O14529 1486 aa20.39■□□□□ 0.85
BBS4-205ENST00000562219 ERCC6Q03468 1493 aa20.37■□□□□ 0.85
BBS4-205ENST00000562219 BAZ1AQ9NRL2 1556 aaPredicted RBP20.28■□□□□ 0.84
BBS4-205ENST00000562219 PEG3Q9GZU2 1588 aa20.23■□□□□ 0.83
BBS4-205ENST00000562219 BAZ1BQ9UIG0 1483 aaKnown RBP20.23■□□□□ 0.83
BBS4-205ENST00000562219 NESP48681 1621 aa20.2■□□□□ 0.82
BBS4-205ENST00000562219 LAMC3Q9Y6N6 1575 aa20.12■□□□□ 0.81
BBS4-205ENST00000562219 THOC2Q8NI27 1593 aaKnown RBP20.11■□□□□ 0.81
BBS4-205ENST00000562219 MROH2BQ7Z745 1585 aa20.08■□□□□ 0.81
BBS4-205ENST00000562219 KIF21AQ7Z4S6 1674 aa20.05■□□□□ 0.8
BBS4-205ENST00000562219 PDS5BQ9NTI5 1447 aa19.93■□□□□ 0.78
BBS4-205ENST00000562219 WIZO95785 1651 aa19.88■□□□□ 0.77
BBS4-205ENST00000562219 CADPSQ9ULU8 1353 aa19.83■□□□□ 0.76
BBS4-205ENST00000562219 MRC2Q9UBG0 1479 aa19.79■□□□□ 0.76
BBS4-205ENST00000562219 WDR62O43379 1518 aa19.78■□□□□ 0.76
BBS4-205ENST00000562219 CEP164Q9UPV0 1460 aa19.69■□□□□ 0.74
BBS4-205ENST00000562219 FANCD2Q9BXW9 1451 aa19.64■□□□□ 0.73
BBS4-205ENST00000562219 TOP2AP11388 1531 aaKnown RBP19.62■□□□□ 0.73
BBS4-205ENST00000562219 CFTRP13569 1480 aa19.61■□□□□ 0.73
BBS4-205ENST00000562219 PRDM2Q13029 1718 aa19.6■□□□□ 0.73
BBS4-205ENST00000562219 RSF1Q96T23 1441 aaPredicted RBP19.59■□□□□ 0.73
BBS4-205ENST00000562219 URB2Q14146 1524 aaKnown RBP19.49■□□□□ 0.71
BBS4-205ENST00000562219 TRIM41Q8WV44 630 aa19.47■□□□□ 0.71
BBS4-205ENST00000562219 OSCARQ8IYS5 282 aa19.35■□□□□ 0.69
BBS4-205ENST00000562219 CCDC88BA6NC98 1476 aa19.34■□□□□ 0.69
BBS4-205ENST00000562219 IFT140Q96RY7 1462 aa19.28■□□□□ 0.68
BBS4-205ENST00000562219 TOPBP1Q92547 1522 aa19.26■□□□□ 0.67
BBS4-205ENST00000562219 ZNF608Q9ULD9 1512 aaPredicted RBP19.25■□□□□ 0.67
BBS4-205ENST00000562219 RIMBP3CA6NJZ7 1639 aa19.23■□□□□ 0.67
BBS4-205ENST00000562219 RIMBP3BA6NNM3 1639 aa19.23■□□□□ 0.67
BBS4-205ENST00000562219 RIMBP3Q9UFD9 1639 aa19.23■□□□□ 0.67
BBS4-205ENST00000562219 EIF4G3O43432 1585 aaKnown RBP19.23■□□□□ 0.67
BBS4-205ENST00000562219 ABCC8Q09428 1581 aa19.23■□□□□ 0.67
BBS4-205ENST00000562219 DNMBPQ6XZF7 1577 aa19.23■□□□□ 0.67
BBS4-205ENST00000562219 TARBP1Q13395 1621 aaKnown RBP19.15■□□□□ 0.66
BBS4-205ENST00000562219 CHD1O14646 1710 aa19.15■□□□□ 0.66
BBS4-205ENST00000562219 ARHGEF11O15085 1522 aa19.12■□□□□ 0.65
BBS4-205ENST00000562219 POLA1P09884 1462 aaPredicted RBP19.05■□□□□ 0.64
BBS4-205ENST00000562219 AQRO60306 1485 aaKnown RBP eCLIP19.04■□□□□ 0.641e-6■■■■■ 40.1
BBS4-205ENST00000562219 WDR97A6NE52 1622 aa18.98■□□□□ 0.63
BBS4-205ENST00000562219 RAD54L2Q9Y4B4 1467 aa18.95■□□□□ 0.62
BBS4-205ENST00000562219 FGD5Q6ZNL6 1462 aa18.92■□□□□ 0.62
BBS4-205ENST00000562219 SOGA1O94964 1423 aa18.91■□□□□ 0.62
BBS4-205ENST00000562219 ARAP1Q96P48 1450 aa18.91■□□□□ 0.62
BBS4-205ENST00000562219 CUX1P39880 1505 aa18.9■□□□□ 0.62
BBS4-205ENST00000562219 FBLN2P98095 1184 aa18.89■□□□□ 0.61
BBS4-205ENST00000562219 CYB5RLQ6IPT4 315 aa18.89■□□□□ 0.61
BBS4-205ENST00000562219 SNAPC4Q5SXM2 1469 aa18.89■□□□□ 0.61
BBS4-205ENST00000562219 TDRD9Q8NDG6 1382 aaKnown RBP18.88■□□□□ 0.61
BBS4-205ENST00000562219 CLASP1Q7Z460 1538 aa18.86■□□□□ 0.61
BBS4-205ENST00000562219 MAGI1Q96QZ7 1491 aaPredicted RBP18.85■□□□□ 0.61
BBS4-205ENST00000562219 PBRM1Q86U86 1689 aa18.85■□□□□ 0.61
BBS4-205ENST00000562219 SYNJ1O43426 1573 aa18.85■□□□□ 0.61
BBS4-205ENST00000562219 GRIN2BQ13224 1484 aa18.81■□□□□ 0.6
BBS4-205ENST00000562219 SYNJ2O15056 1496 aa18.77■□□□□ 0.6
BBS4-205ENST00000562219 CHMP7Q8WUX9 453 aaPredicted RBP18.75■□□□□ 0.59
BBS4-205ENST00000562219 ABCA5Q8WWZ7 1642 aa18.74■□□□□ 0.59
BBS4-205ENST00000562219 GAPVD1Q14C86 1478 aa18.72■□□□□ 0.59
BBS4-205ENST00000562219 TRHP20396 242 aaPredicted RBP18.72■□□□□ 0.59
BBS4-205ENST00000562219 ABCA10Q8WWZ4 1543 aa18.7■□□□□ 0.58
BBS4-205ENST00000562219 BIVM-ERCC5R4GMW8 1640 aa18.63■□□□□ 0.57
BBS4-205ENST00000562219 ADAMTS12P58397 1594 aa18.61■□□□□ 0.57
BBS4-205ENST00000562219 TOP2BQ02880 1626 aa18.6■□□□□ 0.57
BBS4-205ENST00000562219 GRIN2AQ12879 1464 aa18.58■□□□□ 0.57
BBS4-205ENST00000562219 WRNQ14191 1432 aaPredicted RBP eCLIP18.57■□□□□ 0.56
BBS4-205ENST00000562219 CEP170Q5SW79 1584 aa18.55■□□□□ 0.56
BBS4-205ENST00000562219 SUPT5HO00267 1087 aaKnown RBP18.54■□□□□ 0.56
BBS4-205ENST00000562219 ERCC6L2Q5T890 1561 aa18.53■□□□□ 0.56
BBS4-205ENST00000562219 NUP160Q12769 1436 aa18.52■□□□□ 0.56
BBS4-205ENST00000562219 SHROOM2Q13796 1616 aa18.52■□□□□ 0.55
BBS4-205ENST00000562219 ERICH3Q5RHP9 1530 aa18.49■□□□□ 0.55
BBS4-205ENST00000562219 FHAD1B1AJZ9 1412 aa18.48■□□□□ 0.55
BBS4-205ENST00000562219 KIF13AQ9H1H9 1805 aa18.38■□□□□ 0.53
BBS4-205ENST00000562219 RUSC2Q8N2Y8 1516 aa18.36■□□□□ 0.53
BBS4-205ENST00000562219 PRG4Q92954 1404 aaPredicted RBP18.32■□□□□ 0.52
BBS4-205ENST00000562219 AEBP2Q6ZN18 517 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms