RNA–Protein interactions for RNA: ENST00000562174.5

EDC3-204, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-204ENST00000562174 NISCHQ9Y2I1 1504 aa29.32■■■□□ 2.28
EDC3-204ENST00000562174 CCDC180Q9P1Z9 1646 aa26.25■■□□□ 1.79
EDC3-204ENST00000562174 ABCC9O60706 1549 aa25.95■■□□□ 1.74
EDC3-204ENST00000562174 RB1CC1Q8TDY2 1594 aa24.86■■□□□ 1.57
EDC3-204ENST00000562174 NACADO15069 1562 aa24.75■■□□□ 1.55
EDC3-204ENST00000562174 DCAF8L2P0C7V8 631 aa24.59■■□□□ 1.53
EDC3-204ENST00000562174 MYO15BQ96JP2 1530 aa24.5■■□□□ 1.51
EDC3-204ENST00000562174 ZCCHC6Q5VYS8 1495 aaKnown RBP24.39■■□□□ 1.5
EDC3-204ENST00000562174 DCAF1Q9Y4B6 1507 aa24.26■■□□□ 1.47
EDC3-204ENST00000562174 UNC13AQ9UPW8 1703 aa24.18■■□□□ 1.46
EDC3-204ENST00000562174 PABPN1Q86U42 306 aaKnown RBP eCLIP24.15■■□□□ 1.46
EDC3-204ENST00000562174 BICRAQ9NZM4 1560 aa24.06■■□□□ 1.44
EDC3-204ENST00000562174 DNAJC5BQ9UF47 199 aa23.99■■□□□ 1.43
EDC3-204ENST00000562174 SCRIBQ14160 1630 aa23.92■■□□□ 1.42
EDC3-204ENST00000562174 SHROOM4Q9ULL8 1493 aa23.89■■□□□ 1.42
EDC3-204ENST00000562174 EIF4G1Q04637 1599 aaKnown RBP23.49■■□□□ 1.35
EDC3-204ENST00000562174 CC2D2AQ9P2K1 1620 aa23.46■■□□□ 1.35
EDC3-204ENST00000562174 CECR2Q9BXF3 1484 aa23.37■■□□□ 1.33
EDC3-204ENST00000562174 SMARCA4P51532 1647 aa22.84■■□□□ 1.25
EDC3-204ENST00000562174 NCAPD3P42695 1498 aa22.81■■□□□ 1.24
EDC3-204ENST00000562174 SMARCA2P51531 1590 aa22.78■■□□□ 1.24
EDC3-204ENST00000562174 BAZ1AQ9NRL2 1556 aaPredicted RBP22.78■■□□□ 1.24
EDC3-204ENST00000562174 ATAD2BQ9ULI0 1458 aa22.78■■□□□ 1.24
EDC3-204ENST00000562174 HMGXB3Q12766 1538 aa22.72■■□□□ 1.23
EDC3-204ENST00000562174 BAZ1BQ9UIG0 1483 aaKnown RBP22.62■■□□□ 1.21
EDC3-204ENST00000562174 PEG3Q9GZU2 1588 aa22.61■■□□□ 1.21
EDC3-204ENST00000562174 MROH2BQ7Z745 1585 aa22.57■■□□□ 1.2
EDC3-204ENST00000562174 ERCC6Q03468 1493 aa22.46■■□□□ 1.19
EDC3-204ENST00000562174 NESP48681 1621 aa22.34■■□□□ 1.17
EDC3-204ENST00000562174 CUX2O14529 1486 aa22.33■■□□□ 1.16
EDC3-204ENST00000562174 WIZO95785 1651 aa22.3■■□□□ 1.16
EDC3-204ENST00000562174 LAMC3Q9Y6N6 1575 aa22.29■■□□□ 1.16
EDC3-204ENST00000562174 RSF1Q96T23 1441 aaPredicted RBP22.21■■□□□ 1.15
EDC3-204ENST00000562174 PDS5BQ9NTI5 1447 aa22.16■■□□□ 1.14
EDC3-204ENST00000562174 CADPSQ9ULU8 1353 aa22.13■■□□□ 1.13
EDC3-204ENST00000562174 THOC2Q8NI27 1593 aaKnown RBP22.12■■□□□ 1.13
EDC3-204ENST00000562174 TOP2AP11388 1531 aaKnown RBP22.11■■□□□ 1.13
EDC3-204ENST00000562174 KIF21AQ7Z4S6 1674 aa22.07■■□□□ 1.12
EDC3-204ENST00000562174 MRC2Q9UBG0 1479 aa21.96■■□□□ 1.11
EDC3-204ENST00000562174 CFTRP13569 1480 aa21.95■■□□□ 1.1
EDC3-204ENST00000562174 CEP164Q9UPV0 1460 aa21.94■■□□□ 1.1
EDC3-204ENST00000562174 DNAJC5Q9H3Z4 198 aa21.91■■□□□ 1.1
EDC3-204ENST00000562174 FANCD2Q9BXW9 1451 aa21.9■■□□□ 1.1
EDC3-204ENST00000562174 WDR62O43379 1518 aa21.89■■□□□ 1.09
EDC3-204ENST00000562174 CCDC88BA6NC98 1476 aa21.79■■□□□ 1.08
EDC3-204ENST00000562174 PRDM2Q13029 1718 aa21.74■■□□□ 1.07
EDC3-204ENST00000562174 URB2Q14146 1524 aaKnown RBP21.68■■□□□ 1.06
EDC3-204ENST00000562174 TOPBP1Q92547 1522 aa21.5■■□□□ 1.03
EDC3-204ENST00000562174 ABCC8Q09428 1581 aa21.5■■□□□ 1.03
EDC3-204ENST00000562174 DNMBPQ6XZF7 1577 aa21.48■■□□□ 1.03
EDC3-204ENST00000562174 IFT140Q96RY7 1462 aa21.47■■□□□ 1.03
EDC3-204ENST00000562174 SUPT5HO00267 1087 aaKnown RBP21.38■■□□□ 1.01
EDC3-204ENST00000562174 ZNF608Q9ULD9 1512 aaPredicted RBP21.35■■□□□ 1.01
EDC3-204ENST00000562174 POLA1P09884 1462 aaPredicted RBP21.31■■□□□ 1
EDC3-204ENST00000562174 EIF4G3O43432 1585 aaKnown RBP21.31■■□□□ 1
EDC3-204ENST00000562174 TARBP1Q13395 1621 aaKnown RBP21.28■■□□□ 1
EDC3-204ENST00000562174 OSCARQ8IYS5 282 aa21.27■■□□□ 1
EDC3-204ENST00000562174 CUX1P39880 1505 aa21.22■□□□□ 0.99
EDC3-204ENST00000562174 FGD5Q6ZNL6 1462 aa21.21■□□□□ 0.99
EDC3-204ENST00000562174 SOGA1O94964 1423 aa21.19■□□□□ 0.98
EDC3-204ENST00000562174 AQRO60306 1485 aaKnown RBP eCLIP21.19■□□□□ 0.985e-8■■■■□ 24.7
EDC3-204ENST00000562174 RAD54L2Q9Y4B4 1467 aa21.19■□□□□ 0.98
EDC3-204ENST00000562174 WDR97A6NE52 1622 aa21.15■□□□□ 0.98
EDC3-204ENST00000562174 TRIM41Q8WV44 630 aa21.1■□□□□ 0.97
EDC3-204ENST00000562174 TDRD9Q8NDG6 1382 aaKnown RBP21.1■□□□□ 0.97
EDC3-204ENST00000562174 CHD1O14646 1710 aa21.05■□□□□ 0.96
EDC3-204ENST00000562174 SNAPC4Q5SXM2 1469 aa21.04■□□□□ 0.96
EDC3-204ENST00000562174 GRIN2BQ13224 1484 aa21.02■□□□□ 0.96
EDC3-204ENST00000562174 FBLN2P98095 1184 aa21.02■□□□□ 0.96
EDC3-204ENST00000562174 MAGI1Q96QZ7 1491 aaPredicted RBP21.01■□□□□ 0.95
EDC3-204ENST00000562174 ABCA10Q8WWZ4 1543 aa20.99■□□□□ 0.95
EDC3-204ENST00000562174 WRNQ14191 1432 aaPredicted RBP eCLIP20.98■□□□□ 0.95
EDC3-204ENST00000562174 RIMBP3CA6NJZ7 1639 aa20.98■□□□□ 0.95
EDC3-204ENST00000562174 RIMBP3BA6NNM3 1639 aa20.98■□□□□ 0.95
EDC3-204ENST00000562174 RIMBP3Q9UFD9 1639 aa20.98■□□□□ 0.95
EDC3-204ENST00000562174 GAPVD1Q14C86 1478 aa20.97■□□□□ 0.95
EDC3-204ENST00000562174 ARHGEF11O15085 1522 aa20.97■□□□□ 0.95
EDC3-204ENST00000562174 TOP2BQ02880 1626 aa20.96■□□□□ 0.95
EDC3-204ENST00000562174 BIVM-ERCC5R4GMW8 1640 aa20.95■□□□□ 0.94
EDC3-204ENST00000562174 ABCA5Q8WWZ7 1642 aa20.93■□□□□ 0.94
EDC3-204ENST00000562174 SYNJ2O15056 1496 aa20.93■□□□□ 0.94
EDC3-204ENST00000562174 SYNJ1O43426 1573 aa20.93■□□□□ 0.94
EDC3-204ENST00000562174 PBRM1Q86U86 1689 aa20.93■□□□□ 0.94
EDC3-204ENST00000562174 CHMP7Q8WUX9 453 aaPredicted RBP20.91■□□□□ 0.94
EDC3-204ENST00000562174 CLASP1Q7Z460 1538 aa20.85■□□□□ 0.93
EDC3-204ENST00000562174 ADAMTS12P58397 1594 aa20.79■□□□□ 0.92
EDC3-204ENST00000562174 ARAP1Q96P48 1450 aa20.78■□□□□ 0.92
EDC3-204ENST00000562174 GRIN2AQ12879 1464 aa20.75■□□□□ 0.91
EDC3-204ENST00000562174 ERICH3Q5RHP9 1530 aa20.74■□□□□ 0.91
EDC3-204ENST00000562174 CYB5RLQ6IPT4 315 aa20.74■□□□□ 0.91
EDC3-204ENST00000562174 FHAD1B1AJZ9 1412 aa20.71■□□□□ 0.91
EDC3-204ENST00000562174 NUP160Q12769 1436 aa20.66■□□□□ 0.9
EDC3-204ENST00000562174 CEP170Q5SW79 1584 aa20.63■□□□□ 0.89
EDC3-204ENST00000562174 KIF27Q86VH2 1401 aa20.59■□□□□ 0.89
EDC3-204ENST00000562174 SHROOM2Q13796 1616 aa20.52■□□□□ 0.88
EDC3-204ENST00000562174 CUL7Q14999 1698 aa20.51■□□□□ 0.87
EDC3-204ENST00000562174 RUSC2Q8N2Y8 1516 aa20.49■□□□□ 0.87
EDC3-204ENST00000562174 ERCC6L2Q5T890 1561 aa20.49■□□□□ 0.87
EDC3-204ENST00000562174 IGF1RP08069 1367 aa20.46■□□□□ 0.87
EDC3-204ENST00000562174 TRHP20396 242 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms