RNA–Protein interactions for RNA: ENST00000562138.1

ITGAX-202, Transcript of integrin subunit alpha X, humanhuman

TSL 4

Gene ITGAX, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAX-202ENST00000562138 NISCHQ9Y2I1 1504 aa17.13■□□□□ 0.33
ITGAX-202ENST00000562138 CCDC180Q9P1Z9 1646 aa14.9□□□□□ -0.02
ITGAX-202ENST00000562138 ZCCHC6Q5VYS8 1495 aaKnown RBP14.38□□□□□ -0.11
ITGAX-202ENST00000562138 DCAF1Q9Y4B6 1507 aa14.21□□□□□ -0.13
ITGAX-202ENST00000562138 DCAF8L2P0C7V8 631 aa14.17□□□□□ -0.14
ITGAX-202ENST00000562138 MYO15BQ96JP2 1530 aa14.05□□□□□ -0.16
ITGAX-202ENST00000562138 ABCC9O60706 1549 aa14.03□□□□□ -0.16
ITGAX-202ENST00000562138 SHROOM4Q9ULL8 1493 aa13.94□□□□□ -0.18
ITGAX-202ENST00000562138 NACADO15069 1562 aa13.92□□□□□ -0.18
ITGAX-202ENST00000562138 RB1CC1Q8TDY2 1594 aa13.78□□□□□ -0.2
ITGAX-202ENST00000562138 SCRIBQ14160 1630 aa13.65□□□□□ -0.22
ITGAX-202ENST00000562138 SUPT5HO00267 1087 aaKnown RBP13.51□□□□□ -0.25
ITGAX-202ENST00000562138 UNC13AQ9UPW8 1703 aa13.33□□□□□ -0.28
ITGAX-202ENST00000562138 RSF1Q96T23 1441 aaPredicted RBP13.3□□□□□ -0.28
ITGAX-202ENST00000562138 BICRAQ9NZM4 1560 aa13.28□□□□□ -0.28
ITGAX-202ENST00000562138 PABPN1Q86U42 306 aaKnown RBP eCLIP13.26□□□□□ -0.29
ITGAX-202ENST00000562138 CECR2Q9BXF3 1484 aa13.26□□□□□ -0.29
ITGAX-202ENST00000562138 BAZ1AQ9NRL2 1556 aaPredicted RBP13.24□□□□□ -0.29
ITGAX-202ENST00000562138 MROH2BQ7Z745 1585 aa13.2□□□□□ -0.3
ITGAX-202ENST00000562138 SMARCA4P51532 1647 aa13.12□□□□□ -0.31
ITGAX-202ENST00000562138 WIZO95785 1651 aa13.05□□□□□ -0.32
ITGAX-202ENST00000562138 PEG3Q9GZU2 1588 aa12.99□□□□□ -0.33
ITGAX-202ENST00000562138 TOP2AP11388 1531 aaKnown RBP12.99□□□□□ -0.33
ITGAX-202ENST00000562138 SMARCA2P51531 1590 aa12.97□□□□□ -0.33
ITGAX-202ENST00000562138 CHIC1Q5VXU3 224 aa12.96□□□□□ -0.33
ITGAX-202ENST00000562138 ATAD2BQ9ULI0 1458 aa12.94□□□□□ -0.34
ITGAX-202ENST00000562138 EIF4G1Q04637 1599 aaKnown RBP12.9□□□□□ -0.34
ITGAX-202ENST00000562138 BAZ1BQ9UIG0 1483 aaKnown RBP12.88□□□□□ -0.35
ITGAX-202ENST00000562138 NCAPD3P42695 1498 aa12.86□□□□□ -0.35
ITGAX-202ENST00000562138 CCDC88BA6NC98 1476 aa12.85□□□□□ -0.35
ITGAX-202ENST00000562138 HMGXB3Q12766 1538 aa12.82□□□□□ -0.36
ITGAX-202ENST00000562138 TRIM41Q8WV44 630 aa12.76□□□□□ -0.37
ITGAX-202ENST00000562138 CC2D2AQ9P2K1 1620 aa12.69□□□□□ -0.38
ITGAX-202ENST00000562138 CFTRP13569 1480 aa12.57□□□□□ -0.4
ITGAX-202ENST00000562138 WRNQ14191 1432 aaPredicted RBP eCLIP12.55□□□□□ -0.4
ITGAX-202ENST00000562138 CADPSQ9ULU8 1353 aa12.54□□□□□ -0.4
ITGAX-202ENST00000562138 ABCC8Q09428 1581 aa12.52□□□□□ -0.4
ITGAX-202ENST00000562138 EEA1Q15075 1411 aa12.46□□□□□ -0.41
ITGAX-202ENST00000562138 FAM9AQ8IZU1 332 aaPredicted RBP12.44□□□□□ -0.42
ITGAX-202ENST00000562138 LOC105371045A0A1W2PR82 267 aa12.43□□□□□ -0.42
ITGAX-202ENST00000562138 TOP2BQ02880 1626 aa12.4□□□□□ -0.42
ITGAX-202ENST00000562138 PRDM2Q13029 1718 aa12.4□□□□□ -0.43
ITGAX-202ENST00000562138 SYNJ1O43426 1573 aa12.39□□□□□ -0.43
ITGAX-202ENST00000562138 LAMC3Q9Y6N6 1575 aa12.39□□□□□ -0.43
ITGAX-202ENST00000562138 CSRNP3Q8WYN3 585 aa12.37□□□□□ -0.43
ITGAX-202ENST00000562138 BIVM-ERCC5R4GMW8 1640 aa12.37□□□□□ -0.43
ITGAX-202ENST00000562138 FANCD2Q9BXW9 1451 aa12.36□□□□□ -0.43
ITGAX-202ENST00000562138 PDS5BQ9NTI5 1447 aa12.36□□□□□ -0.43
ITGAX-202ENST00000562138 SOGA1O94964 1423 aa12.35□□□□□ -0.43
ITGAX-202ENST00000562138 CUX1P39880 1505 aa12.34□□□□□ -0.43
ITGAX-202ENST00000562138 DNAJC5BQ9UF47 199 aa12.32□□□□□ -0.44
ITGAX-202ENST00000562138 NESP48681 1621 aa12.3□□□□□ -0.44
ITGAX-202ENST00000562138 CEP164Q9UPV0 1460 aa12.29□□□□□ -0.44
ITGAX-202ENST00000562138 KIF27Q86VH2 1401 aa12.27□□□□□ -0.45
ITGAX-202ENST00000562138 RUSC2Q8N2Y8 1516 aa12.26□□□□□ -0.45
ITGAX-202ENST00000562138 DNMBPQ6XZF7 1577 aa12.25□□□□□ -0.45
ITGAX-202ENST00000562138 GOLGA3Q08378 1498 aa12.23□□□□□ -0.45
ITGAX-202ENST00000562138 TNIKQ9UKE5 1360 aa12.22□□□□□ -0.45
ITGAX-202ENST00000562138 TOPBP1Q92547 1522 aa12.21□□□□□ -0.45
ITGAX-202ENST00000562138 FGD5Q6ZNL6 1462 aa12.21□□□□□ -0.45
ITGAX-202ENST00000562138 UBTFP17480 764 aaKnown RBP12.21□□□□□ -0.45
ITGAX-202ENST00000562138 EHMT2Q96KQ7 1210 aa12.21□□□□□ -0.45
ITGAX-202ENST00000562138 KIF21BO75037 1637 aa12.19□□□□□ -0.46
ITGAX-202ENST00000562138 CUX2O14529 1486 aa12.17□□□□□ -0.46
ITGAX-202ENST00000562138 URB2Q14146 1524 aaKnown RBP12.16□□□□□ -0.46
ITGAX-202ENST00000562138 POLA1P09884 1462 aaPredicted RBP12.15□□□□□ -0.46
ITGAX-202ENST00000562138 ABCA10Q8WWZ4 1543 aa12.15□□□□□ -0.46
ITGAX-202ENST00000562138 PRXQ9BXM0 1461 aa12.14□□□□□ -0.47
ITGAX-202ENST00000562138 ERICH3Q5RHP9 1530 aa12.14□□□□□ -0.47
ITGAX-202ENST00000562138 MRC2Q9UBG0 1479 aa12.14□□□□□ -0.47
ITGAX-202ENST00000562138 IGF1RP08069 1367 aa12.13□□□□□ -0.47
ITGAX-202ENST00000562138 KIF21AQ7Z4S6 1674 aa12.11□□□□□ -0.47
ITGAX-202ENST00000562138 CEP162Q5TB80 1403 aa12.11□□□□□ -0.47
ITGAX-202ENST00000562138 RAPGEF2Q9Y4G8 1499 aa12.1□□□□□ -0.47
ITGAX-202ENST00000562138 ERCC6Q03468 1493 aa12.09□□□□□ -0.47
ITGAX-202ENST00000562138 RAD54L2Q9Y4B4 1467 aa12.09□□□□□ -0.47
ITGAX-202ENST00000562138 CARMIL1Q5VZK9 1371 aa12.08□□□□□ -0.48
ITGAX-202ENST00000562138 WDR62O43379 1518 aa12.04□□□□□ -0.48
ITGAX-202ENST00000562138 CLIP1P30622 1438 aa12.03□□□□□ -0.48
ITGAX-202ENST00000562138 GAPVD1Q14C86 1478 aa12.02□□□□□ -0.48
ITGAX-202ENST00000562138 IFT140Q96RY7 1462 aa12.02□□□□□ -0.48
ITGAX-202ENST00000562138 TDRD9Q8NDG6 1382 aaKnown RBP12.01□□□□□ -0.49
ITGAX-202ENST00000562138 TRIM26Q12899 539 aaPredicted RBP12□□□□□ -0.49
ITGAX-202ENST00000562138 WDR97A6NE52 1622 aa12□□□□□ -0.49
ITGAX-202ENST00000562138 CUL7Q14999 1698 aa12□□□□□ -0.49
ITGAX-202ENST00000562138 TARBP1Q13395 1621 aaKnown RBP11.99□□□□□ -0.49
ITGAX-202ENST00000562138 ABCA5Q8WWZ7 1642 aa11.98□□□□□ -0.49
ITGAX-202ENST00000562138 PCGF6Q9BYE7 350 aa11.94□□□□□ -0.5
ITGAX-202ENST00000562138 GRIN2BQ13224 1484 aa11.94□□□□□ -0.5
ITGAX-202ENST00000562138 VPS8Q8N3P4 1428 aa11.94□□□□□ -0.5
ITGAX-202ENST00000562138 THOC2Q8NI27 1593 aaKnown RBP11.93□□□□□ -0.5
ITGAX-202ENST00000562138 APLP2Q06481 763 aa11.93□□□□□ -0.5
ITGAX-202ENST00000562138 FHAD1B1AJZ9 1412 aa11.92□□□□□ -0.5
ITGAX-202ENST00000562138 RANGAP1P46060 587 aaPredicted RBP11.91□□□□□ -0.5
ITGAX-202ENST00000562138 AQRO60306 1485 aaKnown RBP eCLIP11.9□□□□□ -0.5
ITGAX-202ENST00000562138 ZNF608Q9ULD9 1512 aaPredicted RBP11.86□□□□□ -0.51
ITGAX-202ENST00000562138 ARHGAP35Q9NRY4 1499 aa11.85□□□□□ -0.51
ITGAX-202ENST00000562138 PBRM1Q86U86 1689 aa11.84□□□□□ -0.51
ITGAX-202ENST00000562138 ARAP1Q96P48 1450 aa11.84□□□□□ -0.51
ITGAX-202ENST00000562138 MAGI1Q96QZ7 1491 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms