RNA–Protein interactions for RNA: ENST00000562037.1

NAGPA-204, Transcript of N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase, humanhuman

TSL 2

Gene NAGPA, Length 615 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAGPA-204ENST00000562037 NISCHQ9Y2I1 1504 aa48.41■■■■■ 5.34
NAGPA-204ENST00000562037 CCDC180Q9P1Z9 1646 aa43.27■■■■■ 4.52
NAGPA-204ENST00000562037 ABCC9O60706 1549 aa42.76■■■■■ 4.44
NAGPA-204ENST00000562037 RB1CC1Q8TDY2 1594 aa40.91■■■■■ 4.14
NAGPA-204ENST00000562037 NACADO15069 1562 aa40.72■■■■■ 4.11
NAGPA-204ENST00000562037 DCAF8L2P0C7V8 631 aa40.7■■■■■ 4.11
NAGPA-204ENST00000562037 MYO15BQ96JP2 1530 aa40.24■■■■■ 4.03
NAGPA-204ENST00000562037 ZCCHC6Q5VYS8 1495 aaKnown RBP40.24■■■■■ 4.03
NAGPA-204ENST00000562037 UNC13AQ9UPW8 1703 aa40.16■■■■■ 4.02
NAGPA-204ENST00000562037 DCAF1Q9Y4B6 1507 aa39.96■■■■□ 3.99
NAGPA-204ENST00000562037 PABPN1Q86U42 306 aaKnown RBP eCLIP39.88■■■■□ 3.97
NAGPA-204ENST00000562037 BICRAQ9NZM4 1560 aa39.72■■■■□ 3.95
NAGPA-204ENST00000562037 DNAJC5BQ9UF47 199 aa39.59■■■■□ 3.93
NAGPA-204ENST00000562037 SCRIBQ14160 1630 aa39.54■■■■□ 3.92
NAGPA-204ENST00000562037 SHROOM4Q9ULL8 1493 aa39.1■■■■□ 3.85
NAGPA-204ENST00000562037 EIF4G1Q04637 1599 aaKnown RBP38.69■■■■□ 3.78
NAGPA-204ENST00000562037 CC2D2AQ9P2K1 1620 aa38.67■■■■□ 3.78
NAGPA-204ENST00000562037 CECR2Q9BXF3 1484 aa38.42■■■■□ 3.74
NAGPA-204ENST00000562037 SMARCA4P51532 1647 aa37.72■■■■□ 3.63
NAGPA-204ENST00000562037 BAZ1AQ9NRL2 1556 aaPredicted RBP37.55■■■■□ 3.6
NAGPA-204ENST00000562037 ATAD2BQ9ULI0 1458 aa37.54■■■■□ 3.6
NAGPA-204ENST00000562037 NCAPD3P42695 1498 aa37.53■■■■□ 3.6
NAGPA-204ENST00000562037 SMARCA2P51531 1590 aa37.48■■■■□ 3.59
NAGPA-204ENST00000562037 HMGXB3Q12766 1538 aa37.36■■■■□ 3.57
NAGPA-204ENST00000562037 MROH2BQ7Z745 1585 aa37.35■■■■□ 3.57
NAGPA-204ENST00000562037 PEG3Q9GZU2 1588 aa37.26■■■■□ 3.56
NAGPA-204ENST00000562037 BAZ1BQ9UIG0 1483 aaKnown RBP37.24■■■■□ 3.55
NAGPA-204ENST00000562037 WIZO95785 1651 aa37.01■■■■□ 3.52
NAGPA-204ENST00000562037 NESP48681 1621 aa36.91■■■■□ 3.5
NAGPA-204ENST00000562037 ERCC6Q03468 1493 aa36.88■■■■□ 3.49
NAGPA-204ENST00000562037 RSF1Q96T23 1441 aaPredicted RBP36.71■■■■□ 3.47
NAGPA-204ENST00000562037 LAMC3Q9Y6N6 1575 aa36.68■■■■□ 3.46
NAGPA-204ENST00000562037 CUX2O14529 1486 aa36.56■■■■□ 3.44
NAGPA-204ENST00000562037 KIF21AQ7Z4S6 1674 aa36.54■■■■□ 3.44
NAGPA-204ENST00000562037 TOP2AP11388 1531 aaKnown RBP36.49■■■■□ 3.43
NAGPA-204ENST00000562037 CADPSQ9ULU8 1353 aa36.43■■■■□ 3.42
NAGPA-204ENST00000562037 THOC2Q8NI27 1593 aaKnown RBP36.43■■■■□ 3.42
NAGPA-204ENST00000562037 PDS5BQ9NTI5 1447 aa36.4■■■■□ 3.42
NAGPA-204ENST00000562037 CFTRP13569 1480 aa36.14■■■■□ 3.38
NAGPA-204ENST00000562037 MRC2Q9UBG0 1479 aa36.1■■■■□ 3.37
NAGPA-204ENST00000562037 FANCD2Q9BXW9 1451 aa36.07■■■■□ 3.37
NAGPA-204ENST00000562037 CEP164Q9UPV0 1460 aa36.07■■■■□ 3.37
NAGPA-204ENST00000562037 CCDC88BA6NC98 1476 aa36.06■■■■□ 3.36
NAGPA-204ENST00000562037 PRDM2Q13029 1718 aa36.03■■■■□ 3.36
NAGPA-204ENST00000562037 WDR62O43379 1518 aa35.99■■■■□ 3.35
NAGPA-204ENST00000562037 DNAJC5Q9H3Z4 198 aa35.91■■■■□ 3.34
NAGPA-204ENST00000562037 URB2Q14146 1524 aaKnown RBP35.77■■■■□ 3.32
NAGPA-204ENST00000562037 SUPT5HO00267 1087 aaKnown RBP35.56■■■■□ 3.28
NAGPA-204ENST00000562037 TOPBP1Q92547 1522 aa35.47■■■■□ 3.27
NAGPA-204ENST00000562037 DNMBPQ6XZF7 1577 aa35.39■■■■□ 3.26
NAGPA-204ENST00000562037 ABCC8Q09428 1581 aa35.34■■■■□ 3.25
NAGPA-204ENST00000562037 IFT140Q96RY7 1462 aa35.29■■■■□ 3.24
NAGPA-204ENST00000562037 ZNF608Q9ULD9 1512 aaPredicted RBP35.25■■■■□ 3.23
NAGPA-204ENST00000562037 TARBP1Q13395 1621 aaKnown RBP35.14■■■■□ 3.22
NAGPA-204ENST00000562037 POLA1P09884 1462 aaPredicted RBP35.13■■■■□ 3.21
NAGPA-204ENST00000562037 EIF4G3O43432 1585 aaKnown RBP35.13■■■■□ 3.21
NAGPA-204ENST00000562037 CUX1P39880 1505 aa35.07■■■■□ 3.21
NAGPA-204ENST00000562037 RAD54L2Q9Y4B4 1467 aa35.03■■■■□ 3.2
NAGPA-204ENST00000562037 FGD5Q6ZNL6 1462 aa35■■■■□ 3.19
NAGPA-204ENST00000562037 AQRO60306 1485 aaKnown RBP eCLIP34.98■■■■□ 3.19
NAGPA-204ENST00000562037 OSCARQ8IYS5 282 aa34.96■■■■□ 3.19
NAGPA-204ENST00000562037 SOGA1O94964 1423 aa34.96■■■■□ 3.19
NAGPA-204ENST00000562037 CHD1O14646 1710 aa34.84■■■■□ 3.17
NAGPA-204ENST00000562037 TDRD9Q8NDG6 1382 aaKnown RBP34.84■■■■□ 3.17
NAGPA-204ENST00000562037 WDR97A6NE52 1622 aa34.8■■■■□ 3.16
NAGPA-204ENST00000562037 TRIM41Q8WV44 630 aa34.68■■■■□ 3.14
NAGPA-204ENST00000562037 BIVM-ERCC5R4GMW8 1640 aa34.68■■■■□ 3.14
NAGPA-204ENST00000562037 SYNJ1O43426 1573 aa34.66■■■■□ 3.14
NAGPA-204ENST00000562037 FBLN2P98095 1184 aa34.66■■■■□ 3.14
NAGPA-204ENST00000562037 SNAPC4Q5SXM2 1469 aa34.65■■■■□ 3.14
NAGPA-204ENST00000562037 PBRM1Q86U86 1689 aa34.65■■■■□ 3.14
NAGPA-204ENST00000562037 TOP2BQ02880 1626 aa34.65■■■■□ 3.14
NAGPA-204ENST00000562037 WRNQ14191 1432 aaPredicted RBP eCLIP34.64■■■■□ 3.14
NAGPA-204ENST00000562037 GRIN2BQ13224 1484 aa34.59■■■■□ 3.13
NAGPA-204ENST00000562037 ABCA10Q8WWZ4 1543 aa34.59■■■■□ 3.13
NAGPA-204ENST00000562037 RIMBP3CA6NJZ7 1639 aa34.59■■■■□ 3.13
NAGPA-204ENST00000562037 RIMBP3BA6NNM3 1639 aa34.59■■■■□ 3.13
NAGPA-204ENST00000562037 RIMBP3Q9UFD9 1639 aa34.59■■■■□ 3.13
NAGPA-204ENST00000562037 ABCA5Q8WWZ7 1642 aa34.56■■■■□ 3.12
NAGPA-204ENST00000562037 GAPVD1Q14C86 1478 aa34.56■■■■□ 3.12
NAGPA-204ENST00000562037 MAGI1Q96QZ7 1491 aaPredicted RBP34.53■■■■□ 3.12
NAGPA-204ENST00000562037 ARHGEF11O15085 1522 aa34.47■■■■□ 3.11
NAGPA-204ENST00000562037 CHMP7Q8WUX9 453 aaPredicted RBP34.44■■■■□ 3.1
NAGPA-204ENST00000562037 SYNJ2O15056 1496 aa34.41■■■■□ 3.1
NAGPA-204ENST00000562037 CLASP1Q7Z460 1538 aa34.32■■■■□ 3.08
NAGPA-204ENST00000562037 ADAMTS12P58397 1594 aa34.26■■■■□ 3.07
NAGPA-204ENST00000562037 ERICH3Q5RHP9 1530 aa34.18■■■■□ 3.06
NAGPA-204ENST00000562037 ARAP1Q96P48 1450 aa34.17■■■■□ 3.06
NAGPA-204ENST00000562037 GRIN2AQ12879 1464 aa34.16■■■■□ 3.06
NAGPA-204ENST00000562037 CYB5RLQ6IPT4 315 aa34.16■■■■□ 3.06
NAGPA-204ENST00000562037 FHAD1B1AJZ9 1412 aa34.11■■■■□ 3.05
NAGPA-204ENST00000562037 CEP170Q5SW79 1584 aa34.07■■■■□ 3.05
NAGPA-204ENST00000562037 NUP160Q12769 1436 aa33.99■■■■□ 3.03
NAGPA-204ENST00000562037 KIF27Q86VH2 1401 aa33.92■■■■□ 3.02
NAGPA-204ENST00000562037 ERCC6L2Q5T890 1561 aa33.89■■■■□ 3.02
NAGPA-204ENST00000562037 CUL7Q14999 1698 aa33.85■■■■□ 3.01
NAGPA-204ENST00000562037 SHROOM2Q13796 1616 aa33.85■■■■□ 3.01
NAGPA-204ENST00000562037 IGF1RP08069 1367 aa33.83■■■■□ 3.01
NAGPA-204ENST00000562037 RUSC2Q8N2Y8 1516 aa33.77■■■■□ 3
NAGPA-204ENST00000562037 PRG4Q92954 1404 aaPredicted RBP33.66■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms