RNA–Protein interactions for RNA: ENST00000562018.1

RSRP1-209, Transcript of arginine and serine rich protein 1, humanhuman

TSL 4

Gene RSRP1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSRP1-209ENST00000562018 NISCHQ9Y2I1 1504 aa44.34■■■■■ 4.69
RSRP1-209ENST00000562018 CCDC180Q9P1Z9 1646 aa39.52■■■■□ 3.92
RSRP1-209ENST00000562018 ABCC9O60706 1549 aa38.89■■■■□ 3.82
RSRP1-209ENST00000562018 RB1CC1Q8TDY2 1594 aa37.28■■■■□ 3.56
RSRP1-209ENST00000562018 NACADO15069 1562 aa37.17■■■■□ 3.54
RSRP1-209ENST00000562018 DCAF8L2P0C7V8 631 aa37.12■■■■□ 3.53
RSRP1-209ENST00000562018 ZCCHC6Q5VYS8 1495 aaKnown RBP36.91■■■■□ 3.5
RSRP1-209ENST00000562018 MYO15BQ96JP2 1530 aa36.85■■■■□ 3.49
RSRP1-209ENST00000562018 DCAF1Q9Y4B6 1507 aa36.64■■■■□ 3.46
RSRP1-209ENST00000562018 UNC13AQ9UPW8 1703 aa36.51■■■■□ 3.43
RSRP1-209ENST00000562018 PABPN1Q86U42 306 aaKnown RBP eCLIP36.28■■■■□ 3.4
RSRP1-209ENST00000562018 BICRAQ9NZM4 1560 aa36.19■■■■□ 3.38
RSRP1-209ENST00000562018 SCRIBQ14160 1630 aa36.1■■■■□ 3.37
RSRP1-209ENST00000562018 DNAJC5BQ9UF47 199 aa35.83■■■■□ 3.33
RSRP1-209ENST00000562018 SHROOM4Q9ULL8 1493 aa35.72■■■■□ 3.31
RSRP1-209ENST00000562018 EIF4G1Q04637 1599 aaKnown RBP35.25■■■■□ 3.23
RSRP1-209ENST00000562018 CC2D2AQ9P2K1 1620 aa35.16■■■■□ 3.22
RSRP1-209ENST00000562018 CECR2Q9BXF3 1484 aa34.93■■■■□ 3.18
RSRP1-209ENST00000562018 SMARCA4P51532 1647 aa34.48■■■■□ 3.11
RSRP1-209ENST00000562018 BAZ1AQ9NRL2 1556 aaPredicted RBP34.37■■■■□ 3.09
RSRP1-209ENST00000562018 ATAD2BQ9ULI0 1458 aa34.31■■■■□ 3.08
RSRP1-209ENST00000562018 NCAPD3P42695 1498 aa34.28■■■■□ 3.08
RSRP1-209ENST00000562018 SMARCA2P51531 1590 aa34.24■■■■□ 3.07
RSRP1-209ENST00000562018 MROH2BQ7Z745 1585 aa34.2■■■■□ 3.07
RSRP1-209ENST00000562018 HMGXB3Q12766 1538 aa34.14■■■■□ 3.06
RSRP1-209ENST00000562018 PEG3Q9GZU2 1588 aa34.1■■■■□ 3.05
RSRP1-209ENST00000562018 BAZ1BQ9UIG0 1483 aaKnown RBP34.03■■■■□ 3.04
RSRP1-209ENST00000562018 WIZO95785 1651 aa33.84■■■■□ 3.01
RSRP1-209ENST00000562018 RSF1Q96T23 1441 aaPredicted RBP33.7■■■□□ 2.99
RSRP1-209ENST00000562018 NESP48681 1621 aa33.61■■■□□ 2.97
RSRP1-209ENST00000562018 ERCC6Q03468 1493 aa33.51■■■□□ 2.96
RSRP1-209ENST00000562018 TOP2AP11388 1531 aaKnown RBP33.44■■■□□ 2.94
RSRP1-209ENST00000562018 LAMC3Q9Y6N6 1575 aa33.44■■■□□ 2.94
RSRP1-209ENST00000562018 CADPSQ9ULU8 1353 aa33.28■■■□□ 2.92
RSRP1-209ENST00000562018 KIF21AQ7Z4S6 1674 aa33.22■■■□□ 2.91
RSRP1-209ENST00000562018 CUX2O14529 1486 aa33.2■■■□□ 2.91
RSRP1-209ENST00000562018 PDS5BQ9NTI5 1447 aa33.19■■■□□ 2.9
RSRP1-209ENST00000562018 THOC2Q8NI27 1593 aaKnown RBP33.14■■■□□ 2.9
RSRP1-209ENST00000562018 CFTRP13569 1480 aa33.05■■■□□ 2.88
RSRP1-209ENST00000562018 CCDC88BA6NC98 1476 aa33.04■■■□□ 2.88
RSRP1-209ENST00000562018 FANCD2Q9BXW9 1451 aa32.93■■■□□ 2.86
RSRP1-209ENST00000562018 CEP164Q9UPV0 1460 aa32.92■■■□□ 2.86
RSRP1-209ENST00000562018 MRC2Q9UBG0 1479 aa32.91■■■□□ 2.86
RSRP1-209ENST00000562018 PRDM2Q13029 1718 aa32.85■■■□□ 2.85
RSRP1-209ENST00000562018 WDR62O43379 1518 aa32.82■■■□□ 2.84
RSRP1-209ENST00000562018 SUPT5HO00267 1087 aaKnown RBP32.72■■■□□ 2.83
RSRP1-209ENST00000562018 URB2Q14146 1524 aaKnown RBP32.64■■■□□ 2.82
RSRP1-209ENST00000562018 TOPBP1Q92547 1522 aa32.4■■■□□ 2.78
RSRP1-209ENST00000562018 DNAJC5Q9H3Z4 198 aa32.37■■■□□ 2.77
RSRP1-209ENST00000562018 DNMBPQ6XZF7 1577 aa32.35■■■□□ 2.77
RSRP1-209ENST00000562018 ABCC8Q09428 1581 aa32.32■■■□□ 2.76
RSRP1-209ENST00000562018 IFT140Q96RY7 1462 aa32.22■■■□□ 2.75
RSRP1-209ENST00000562018 ZNF608Q9ULD9 1512 aaPredicted RBP32.13■■■□□ 2.73
RSRP1-209ENST00000562018 POLA1P09884 1462 aaPredicted RBP32.11■■■□□ 2.73
RSRP1-209ENST00000562018 CUX1P39880 1505 aa32.1■■■□□ 2.73
RSRP1-209ENST00000562018 TARBP1Q13395 1621 aaKnown RBP32.07■■■□□ 2.72
RSRP1-209ENST00000562018 FGD5Q6ZNL6 1462 aa32.02■■■□□ 2.72
RSRP1-209ENST00000562018 EIF4G3O43432 1585 aaKnown RBP32.02■■■□□ 2.72
RSRP1-209ENST00000562018 RAD54L2Q9Y4B4 1467 aa31.99■■■□□ 2.71
RSRP1-209ENST00000562018 SOGA1O94964 1423 aa31.94■■■□□ 2.7
RSRP1-209ENST00000562018 AQRO60306 1485 aaKnown RBP eCLIP31.91■■■□□ 2.7
RSRP1-209ENST00000562018 TDRD9Q8NDG6 1382 aaKnown RBP31.81■■■□□ 2.68
RSRP1-209ENST00000562018 WRNQ14191 1432 aaPredicted RBP eCLIP31.79■■■□□ 2.68
RSRP1-209ENST00000562018 WDR97A6NE52 1622 aa31.78■■■□□ 2.68
RSRP1-209ENST00000562018 SYNJ1O43426 1573 aa31.77■■■□□ 2.68
RSRP1-209ENST00000562018 BIVM-ERCC5R4GMW8 1640 aa31.77■■■□□ 2.68
RSRP1-209ENST00000562018 TOP2BQ02880 1626 aa31.75■■■□□ 2.67
RSRP1-209ENST00000562018 OSCARQ8IYS5 282 aa31.74■■■□□ 2.67
RSRP1-209ENST00000562018 CHD1O14646 1710 aa31.66■■■□□ 2.66
RSRP1-209ENST00000562018 ABCA10Q8WWZ4 1543 aa31.66■■■□□ 2.66
RSRP1-209ENST00000562018 SNAPC4Q5SXM2 1469 aa31.63■■■□□ 2.65
RSRP1-209ENST00000562018 GRIN2BQ13224 1484 aa31.6■■■□□ 2.65
RSRP1-209ENST00000562018 ABCA5Q8WWZ7 1642 aa31.6■■■□□ 2.65
RSRP1-209ENST00000562018 PBRM1Q86U86 1689 aa31.59■■■□□ 2.65
RSRP1-209ENST00000562018 GAPVD1Q14C86 1478 aa31.59■■■□□ 2.65
RSRP1-209ENST00000562018 FBLN2P98095 1184 aa31.55■■■□□ 2.64
RSRP1-209ENST00000562018 MAGI1Q96QZ7 1491 aaPredicted RBP31.53■■■□□ 2.64
RSRP1-209ENST00000562018 SYNJ2O15056 1496 aa31.42■■■□□ 2.62
RSRP1-209ENST00000562018 CHMP7Q8WUX9 453 aaPredicted RBP31.4■■■□□ 2.62
RSRP1-209ENST00000562018 RIMBP3CA6NJZ7 1639 aa31.35■■■□□ 2.61
RSRP1-209ENST00000562018 RIMBP3BA6NNM3 1639 aa31.35■■■□□ 2.61
RSRP1-209ENST00000562018 RIMBP3Q9UFD9 1639 aa31.35■■■□□ 2.61
RSRP1-209ENST00000562018 ADAMTS12P58397 1594 aa31.32■■■□□ 2.6
RSRP1-209ENST00000562018 ARHGEF11O15085 1522 aa31.31■■■□□ 2.6
RSRP1-209ENST00000562018 TRIM41Q8WV44 630 aa31.3■■■□□ 2.6
RSRP1-209ENST00000562018 ERICH3Q5RHP9 1530 aa31.28■■■□□ 2.6
RSRP1-209ENST00000562018 CLASP1Q7Z460 1538 aa31.28■■■□□ 2.6
RSRP1-209ENST00000562018 GRIN2AQ12879 1464 aa31.21■■■□□ 2.59
RSRP1-209ENST00000562018 FHAD1B1AJZ9 1412 aa31.2■■■□□ 2.59
RSRP1-209ENST00000562018 KIF27Q86VH2 1401 aa31.12■■■□□ 2.57
RSRP1-209ENST00000562018 CEP170Q5SW79 1584 aa31.1■■■□□ 2.57
RSRP1-209ENST00000562018 NUP160Q12769 1436 aa31.07■■■□□ 2.56
RSRP1-209ENST00000562018 ARAP1Q96P48 1450 aa31.06■■■□□ 2.56
RSRP1-209ENST00000562018 IGF1RP08069 1367 aa31.01■■■□□ 2.55
RSRP1-209ENST00000562018 CYB5RLQ6IPT4 315 aa30.99■■■□□ 2.55
RSRP1-209ENST00000562018 CUL7Q14999 1698 aa30.98■■■□□ 2.55
RSRP1-209ENST00000562018 SHROOM2Q13796 1616 aa30.87■■■□□ 2.53
RSRP1-209ENST00000562018 RUSC2Q8N2Y8 1516 aa30.87■■■□□ 2.53
RSRP1-209ENST00000562018 ERCC6L2Q5T890 1561 aa30.87■■■□□ 2.53
RSRP1-209ENST00000562018 CARMIL1Q5VZK9 1371 aa30.82■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 488.7 ms