RNA–Protein interactions for RNA: ENST00000561996.1

CPT1A-207, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 4

Gene CPT1A, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-207ENST00000561996 NISCHQ9Y2I1 1504 aa46.04■■■■■ 4.96
CPT1A-207ENST00000561996 CCDC180Q9P1Z9 1646 aa41.17■■■■■ 4.18
CPT1A-207ENST00000561996 ABCC9O60706 1549 aa40.8■■■■■ 4.12
CPT1A-207ENST00000561996 RB1CC1Q8TDY2 1594 aa39.06■■■■□ 3.84
CPT1A-207ENST00000561996 NACADO15069 1562 aa38.9■■■■□ 3.82
CPT1A-207ENST00000561996 DCAF8L2P0C7V8 631 aa38.64■■■■□ 3.78
CPT1A-207ENST00000561996 MYO15BQ96JP2 1530 aa38.54■■■■□ 3.76
CPT1A-207ENST00000561996 ZCCHC6Q5VYS8 1495 aaKnown RBP38.23■■■■□ 3.71
CPT1A-207ENST00000561996 DCAF1Q9Y4B6 1507 aa38.14■■■■□ 3.7
CPT1A-207ENST00000561996 PABPN1Q86U42 306 aaKnown RBP eCLIP38.03■■■■□ 3.68
CPT1A-207ENST00000561996 UNC13AQ9UPW8 1703 aa37.99■■■■□ 3.67
CPT1A-207ENST00000561996 DNAJC5BQ9UF47 199 aa37.97■■■■□ 3.67
CPT1A-207ENST00000561996 BICRAQ9NZM4 1560 aa37.84■■■■□ 3.65
CPT1A-207ENST00000561996 SHROOM4Q9ULL8 1493 aa37.56■■■■□ 3.6
CPT1A-207ENST00000561996 SCRIBQ14160 1630 aa37.44■■■■□ 3.58
CPT1A-207ENST00000561996 EIF4G1Q04637 1599 aaKnown RBP36.91■■■■□ 3.5
CPT1A-207ENST00000561996 CC2D2AQ9P2K1 1620 aa36.88■■■■□ 3.49
CPT1A-207ENST00000561996 CECR2Q9BXF3 1484 aa36.78■■■■□ 3.48
CPT1A-207ENST00000561996 NCAPD3P42695 1498 aa35.92■■■■□ 3.34
CPT1A-207ENST00000561996 ATAD2BQ9ULI0 1458 aa35.8■■■■□ 3.32
CPT1A-207ENST00000561996 SMARCA4P51532 1647 aa35.8■■■■□ 3.32
CPT1A-207ENST00000561996 SMARCA2P51531 1590 aa35.76■■■■□ 3.31
CPT1A-207ENST00000561996 BAZ1AQ9NRL2 1556 aaPredicted RBP35.74■■■■□ 3.31
CPT1A-207ENST00000561996 HMGXB3Q12766 1538 aa35.67■■■■□ 3.3
CPT1A-207ENST00000561996 PEG3Q9GZU2 1588 aa35.54■■■■□ 3.28
CPT1A-207ENST00000561996 BAZ1BQ9UIG0 1483 aaKnown RBP35.48■■■■□ 3.27
CPT1A-207ENST00000561996 MROH2BQ7Z745 1585 aa35.42■■■■□ 3.26
CPT1A-207ENST00000561996 ERCC6Q03468 1493 aa35.26■■■■□ 3.23
CPT1A-207ENST00000561996 CUX2O14529 1486 aa35.16■■■■□ 3.22
CPT1A-207ENST00000561996 NESP48681 1621 aa35.11■■■■□ 3.21
CPT1A-207ENST00000561996 LAMC3Q9Y6N6 1575 aa35.03■■■■□ 3.2
CPT1A-207ENST00000561996 WIZO95785 1651 aa34.95■■■■□ 3.19
CPT1A-207ENST00000561996 RSF1Q96T23 1441 aaPredicted RBP34.86■■■■□ 3.17
CPT1A-207ENST00000561996 PDS5BQ9NTI5 1447 aa34.86■■■■□ 3.17
CPT1A-207ENST00000561996 CADPSQ9ULU8 1353 aa34.83■■■■□ 3.17
CPT1A-207ENST00000561996 DNAJC5Q9H3Z4 198 aa34.75■■■■□ 3.15
CPT1A-207ENST00000561996 THOC2Q8NI27 1593 aaKnown RBP34.73■■■■□ 3.15
CPT1A-207ENST00000561996 TOP2AP11388 1531 aaKnown RBP34.65■■■■□ 3.14
CPT1A-207ENST00000561996 KIF21AQ7Z4S6 1674 aa34.63■■■■□ 3.13
CPT1A-207ENST00000561996 CFTRP13569 1480 aa34.5■■■■□ 3.11
CPT1A-207ENST00000561996 MRC2Q9UBG0 1479 aa34.49■■■■□ 3.11
CPT1A-207ENST00000561996 CEP164Q9UPV0 1460 aa34.41■■■■□ 3.1
CPT1A-207ENST00000561996 FANCD2Q9BXW9 1451 aa34.39■■■■□ 3.1
CPT1A-207ENST00000561996 WDR62O43379 1518 aa34.39■■■■□ 3.1
CPT1A-207ENST00000561996 CCDC88BA6NC98 1476 aa34.22■■■■□ 3.07
CPT1A-207ENST00000561996 PRDM2Q13029 1718 aa34.06■■■■□ 3.04
CPT1A-207ENST00000561996 URB2Q14146 1524 aaKnown RBP34.05■■■■□ 3.04
CPT1A-207ENST00000561996 ABCC8Q09428 1581 aa33.81■■■■□ 3
CPT1A-207ENST00000561996 TOPBP1Q92547 1522 aa33.76■■■■□ 3
CPT1A-207ENST00000561996 IFT140Q96RY7 1462 aa33.75■■■□□ 2.99
CPT1A-207ENST00000561996 DNMBPQ6XZF7 1577 aa33.68■■■□□ 2.98
CPT1A-207ENST00000561996 OSCARQ8IYS5 282 aa33.59■■■□□ 2.97
CPT1A-207ENST00000561996 ZNF608Q9ULD9 1512 aaPredicted RBP33.56■■■□□ 2.96
CPT1A-207ENST00000561996 SUPT5HO00267 1087 aaKnown RBP33.47■■■□□ 2.95
CPT1A-207ENST00000561996 POLA1P09884 1462 aaPredicted RBP33.44■■■□□ 2.94
CPT1A-207ENST00000561996 TARBP1Q13395 1621 aaKnown RBP33.42■■■□□ 2.94
CPT1A-207ENST00000561996 EIF4G3O43432 1585 aaKnown RBP33.39■■■□□ 2.94
CPT1A-207ENST00000561996 SOGA1O94964 1423 aa33.32■■■□□ 2.92
CPT1A-207ENST00000561996 AQRO60306 1485 aaKnown RBP eCLIP33.31■■■□□ 2.92
CPT1A-207ENST00000561996 CUX1P39880 1505 aa33.27■■■□□ 2.92
CPT1A-207ENST00000561996 FGD5Q6ZNL6 1462 aa33.26■■■□□ 2.92
CPT1A-207ENST00000561996 RAD54L2Q9Y4B4 1467 aa33.26■■■□□ 2.92
CPT1A-207ENST00000561996 TRIM41Q8WV44 630 aa33.25■■■□□ 2.91
CPT1A-207ENST00000561996 WDR97A6NE52 1622 aa33.22■■■□□ 2.91
CPT1A-207ENST00000561996 TDRD9Q8NDG6 1382 aaKnown RBP33.17■■■□□ 2.9
CPT1A-207ENST00000561996 FBLN2P98095 1184 aa33.03■■■□□ 2.88
CPT1A-207ENST00000561996 CHD1O14646 1710 aa33.02■■■□□ 2.88
CPT1A-207ENST00000561996 GRIN2BQ13224 1484 aa33.02■■■□□ 2.88
CPT1A-207ENST00000561996 MAGI1Q96QZ7 1491 aaPredicted RBP33■■■□□ 2.87
CPT1A-207ENST00000561996 RIMBP3CA6NJZ7 1639 aa33■■■□□ 2.87
CPT1A-207ENST00000561996 RIMBP3BA6NNM3 1639 aa33■■■□□ 2.87
CPT1A-207ENST00000561996 RIMBP3Q9UFD9 1639 aa33■■■□□ 2.87
CPT1A-207ENST00000561996 SNAPC4Q5SXM2 1469 aa32.99■■■□□ 2.87
CPT1A-207ENST00000561996 ARHGEF11O15085 1522 aa32.99■■■□□ 2.87
CPT1A-207ENST00000561996 ABCA10Q8WWZ4 1543 aa32.96■■■□□ 2.87
CPT1A-207ENST00000561996 GAPVD1Q14C86 1478 aa32.92■■■□□ 2.86
CPT1A-207ENST00000561996 CHMP7Q8WUX9 453 aaPredicted RBP32.91■■■□□ 2.86
CPT1A-207ENST00000561996 WRNQ14191 1432 aaPredicted RBP eCLIP32.91■■■□□ 2.862e-10■■■■■ 91.9
CPT1A-207ENST00000561996 SYNJ2O15056 1496 aa32.87■■■□□ 2.85
CPT1A-207ENST00000561996 TOP2BQ02880 1626 aa32.85■■■□□ 2.85
CPT1A-207ENST00000561996 BIVM-ERCC5R4GMW8 1640 aa32.83■■■□□ 2.85
CPT1A-207ENST00000561996 ABCA5Q8WWZ7 1642 aa32.82■■■□□ 2.84
CPT1A-207ENST00000561996 SYNJ1O43426 1573 aa32.79■■■□□ 2.84
CPT1A-207ENST00000561996 PBRM1Q86U86 1689 aa32.78■■■□□ 2.84
CPT1A-207ENST00000561996 CLASP1Q7Z460 1538 aa32.76■■■□□ 2.83
CPT1A-207ENST00000561996 CYB5RLQ6IPT4 315 aa32.72■■■□□ 2.83
CPT1A-207ENST00000561996 ARAP1Q96P48 1450 aa32.67■■■□□ 2.82
CPT1A-207ENST00000561996 GRIN2AQ12879 1464 aa32.56■■■□□ 2.8
CPT1A-207ENST00000561996 ERICH3Q5RHP9 1530 aa32.56■■■□□ 2.8
CPT1A-207ENST00000561996 ADAMTS12P58397 1594 aa32.55■■■□□ 2.8
CPT1A-207ENST00000561996 FHAD1B1AJZ9 1412 aa32.55■■■□□ 2.8
CPT1A-207ENST00000561996 NUP160Q12769 1436 aa32.47■■■□□ 2.79
CPT1A-207ENST00000561996 CEP170Q5SW79 1584 aa32.38■■■□□ 2.77
CPT1A-207ENST00000561996 KIF27Q86VH2 1401 aa32.28■■■□□ 2.76
CPT1A-207ENST00000561996 TRHP20396 242 aaPredicted RBP32.25■■■□□ 2.75
CPT1A-207ENST00000561996 SHROOM2Q13796 1616 aa32.24■■■□□ 2.75
CPT1A-207ENST00000561996 IGF1RP08069 1367 aa32.2■■■□□ 2.75
CPT1A-207ENST00000561996 ERCC6L2Q5T890 1561 aa32.18■■■□□ 2.74
CPT1A-207ENST00000561996 JPH4Q96JJ6 628 aa32.13■■■□□ 2.73
CPT1A-207ENST00000561996 CUL7Q14999 1698 aa32.11■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms