RNA–Protein interactions for RNA: ENST00000561904.5

E2F4-202, Transcript of E2F transcription factor 4, humanhuman

TSL 3

Gene E2F4, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F4-202ENST00000561904 NISCHQ9Y2I1 1504 aa44.44■■■■■ 4.7
E2F4-202ENST00000561904 ABCC9O60706 1549 aa39.97■■■■□ 3.99
E2F4-202ENST00000561904 CCDC180Q9P1Z9 1646 aa39.84■■■■□ 3.97
E2F4-202ENST00000561904 RB1CC1Q8TDY2 1594 aa37.94■■■■□ 3.66
E2F4-202ENST00000561904 NACADO15069 1562 aa37.65■■■■□ 3.62
E2F4-202ENST00000561904 DCAF8L2P0C7V8 631 aa37.62■■■■□ 3.61
E2F4-202ENST00000561904 DNAJC5BQ9UF47 199 aa37.53■■■■□ 3.6
E2F4-202ENST00000561904 PABPN1Q86U42 306 aaKnown RBP eCLIP37.24■■■■□ 3.55
E2F4-202ENST00000561904 UNC13AQ9UPW8 1703 aa37.19■■■■□ 3.54
E2F4-202ENST00000561904 MYO15BQ96JP2 1530 aa37.06■■■■□ 3.52
E2F4-202ENST00000561904 BICRAQ9NZM4 1560 aa36.9■■■■□ 3.5
E2F4-202ENST00000561904 ZCCHC6Q5VYS8 1495 aaKnown RBP36.82■■■■□ 3.49
E2F4-202ENST00000561904 DCAF1Q9Y4B6 1507 aa36.62■■■■□ 3.45
E2F4-202ENST00000561904 SCRIBQ14160 1630 aa36.43■■■■□ 3.42
E2F4-202ENST00000561904 SHROOM4Q9ULL8 1493 aa36.24■■■■□ 3.39
E2F4-202ENST00000561904 CC2D2AQ9P2K1 1620 aa36.08■■■■□ 3.37
E2F4-202ENST00000561904 EIF4G1Q04637 1599 aaKnown RBP35.97■■■■□ 3.35
E2F4-202ENST00000561904 CECR2Q9BXF3 1484 aa35.96■■■■□ 3.35
E2F4-202ENST00000561904 NCAPD3P42695 1498 aa34.77■■■■□ 3.16
E2F4-202ENST00000561904 ATAD2BQ9ULI0 1458 aa34.71■■■■□ 3.15
E2F4-202ENST00000561904 SMARCA4P51532 1647 aa34.69■■■■□ 3.14
E2F4-202ENST00000561904 SMARCA2P51531 1590 aa34.57■■■■□ 3.12
E2F4-202ENST00000561904 HMGXB3Q12766 1538 aa34.51■■■■□ 3.12
E2F4-202ENST00000561904 BAZ1AQ9NRL2 1556 aaPredicted RBP34.47■■■■□ 3.11
E2F4-202ENST00000561904 ERCC6Q03468 1493 aa34.46■■■■□ 3.11
E2F4-202ENST00000561904 DNAJC5Q9H3Z4 198 aa34.37■■■■□ 3.09
E2F4-202ENST00000561904 BAZ1BQ9UIG0 1483 aaKnown RBP34.37■■■■□ 3.09
E2F4-202ENST00000561904 NESP48681 1621 aa34.36■■■■□ 3.09
E2F4-202ENST00000561904 CUX2O14529 1486 aa34.33■■■■□ 3.09
E2F4-202ENST00000561904 MROH2BQ7Z745 1585 aa34.3■■■■□ 3.08
E2F4-202ENST00000561904 PEG3Q9GZU2 1588 aa34.28■■■■□ 3.08
E2F4-202ENST00000561904 LAMC3Q9Y6N6 1575 aa33.99■■■■□ 3.03
E2F4-202ENST00000561904 THOC2Q8NI27 1593 aaKnown RBP33.95■■■■□ 3.03
E2F4-202ENST00000561904 WIZO95785 1651 aa33.91■■■■□ 3.02
E2F4-202ENST00000561904 KIF21AQ7Z4S6 1674 aa33.9■■■■□ 3.02
E2F4-202ENST00000561904 PDS5BQ9NTI5 1447 aa33.79■■■■□ 3
E2F4-202ENST00000561904 CADPSQ9ULU8 1353 aa33.73■■■□□ 2.99
E2F4-202ENST00000561904 RSF1Q96T23 1441 aaPredicted RBP33.54■■■□□ 2.96
E2F4-202ENST00000561904 MRC2Q9UBG0 1479 aa33.54■■■□□ 2.96
E2F4-202ENST00000561904 WDR62O43379 1518 aa33.45■■■□□ 2.95
E2F4-202ENST00000561904 CEP164Q9UPV0 1460 aa33.41■■■□□ 2.94
E2F4-202ENST00000561904 TOP2AP11388 1531 aaKnown RBP33.41■■■□□ 2.94
E2F4-202ENST00000561904 FANCD2Q9BXW9 1451 aa33.38■■■□□ 2.93
E2F4-202ENST00000561904 CFTRP13569 1480 aa33.34■■■□□ 2.93
E2F4-202ENST00000561904 URB2Q14146 1524 aaKnown RBP33.14■■■□□ 2.9
E2F4-202ENST00000561904 CCDC88BA6NC98 1476 aa33.07■■■□□ 2.88
E2F4-202ENST00000561904 PRDM2Q13029 1718 aa33.04■■■□□ 2.88
E2F4-202ENST00000561904 TRIM41Q8WV44 630 aa32.97■■■□□ 2.87
E2F4-202ENST00000561904 OSCARQ8IYS5 282 aa32.79■■■□□ 2.84
E2F4-202ENST00000561904 TOPBP1Q92547 1522 aa32.76■■■□□ 2.83
E2F4-202ENST00000561904 ZNF608Q9ULD9 1512 aaPredicted RBP32.76■■■□□ 2.83
E2F4-202ENST00000561904 IFT140Q96RY7 1462 aa32.72■■■□□ 2.83
E2F4-202ENST00000561904 DNMBPQ6XZF7 1577 aa32.62■■■□□ 2.81
E2F4-202ENST00000561904 ABCC8Q09428 1581 aa32.58■■■□□ 2.81
E2F4-202ENST00000561904 EIF4G3O43432 1585 aaKnown RBP32.55■■■□□ 2.8
E2F4-202ENST00000561904 TARBP1Q13395 1621 aaKnown RBP32.48■■■□□ 2.79
E2F4-202ENST00000561904 AQRO60306 1485 aaKnown RBP eCLIP32.45■■■□□ 2.792e-7■■■■■ 30.6
E2F4-202ENST00000561904 RIMBP3CA6NJZ7 1639 aa32.44■■■□□ 2.78
E2F4-202ENST00000561904 RIMBP3BA6NNM3 1639 aa32.44■■■□□ 2.78
E2F4-202ENST00000561904 RIMBP3Q9UFD9 1639 aa32.44■■■□□ 2.78
E2F4-202ENST00000561904 POLA1P09884 1462 aaPredicted RBP32.42■■■□□ 2.78
E2F4-202ENST00000561904 RAD54L2Q9Y4B4 1467 aa32.36■■■□□ 2.77
E2F4-202ENST00000561904 CHD1O14646 1710 aa32.34■■■□□ 2.77
E2F4-202ENST00000561904 ARHGEF11O15085 1522 aa32.31■■■□□ 2.76
E2F4-202ENST00000561904 SOGA1O94964 1423 aa32.27■■■□□ 2.76
E2F4-202ENST00000561904 TDRD9Q8NDG6 1382 aaKnown RBP32.25■■■□□ 2.75
E2F4-202ENST00000561904 FBLN2P98095 1184 aa32.25■■■□□ 2.75
E2F4-202ENST00000561904 FGD5Q6ZNL6 1462 aa32.23■■■□□ 2.75
E2F4-202ENST00000561904 CUX1P39880 1505 aa32.21■■■□□ 2.75
E2F4-202ENST00000561904 SUPT5HO00267 1087 aaKnown RBP32.15■■■□□ 2.74
E2F4-202ENST00000561904 SNAPC4Q5SXM2 1469 aa32.1■■■□□ 2.73
E2F4-202ENST00000561904 CYB5RLQ6IPT4 315 aa32.1■■■□□ 2.73
E2F4-202ENST00000561904 WDR97A6NE52 1622 aa32.03■■■□□ 2.72
E2F4-202ENST00000561904 ARAP1Q96P48 1450 aa32.01■■■□□ 2.71
E2F4-202ENST00000561904 GRIN2BQ13224 1484 aa31.97■■■□□ 2.71
E2F4-202ENST00000561904 CHMP7Q8WUX9 453 aaPredicted RBP31.95■■■□□ 2.71
E2F4-202ENST00000561904 MAGI1Q96QZ7 1491 aaPredicted RBP31.94■■■□□ 2.7
E2F4-202ENST00000561904 CLASP1Q7Z460 1538 aa31.91■■■□□ 2.7
E2F4-202ENST00000561904 PBRM1Q86U86 1689 aa31.9■■■□□ 2.7
E2F4-202ENST00000561904 SYNJ1O43426 1573 aa31.87■■■□□ 2.69
E2F4-202ENST00000561904 SYNJ2O15056 1496 aa31.86■■■□□ 2.69
E2F4-202ENST00000561904 GAPVD1Q14C86 1478 aa31.86■■■□□ 2.69
E2F4-202ENST00000561904 ABCA10Q8WWZ4 1543 aa31.82■■■□□ 2.68
E2F4-202ENST00000561904 ABCA5Q8WWZ7 1642 aa31.81■■■□□ 2.68
E2F4-202ENST00000561904 TRHP20396 242 aaPredicted RBP31.75■■■□□ 2.67
E2F4-202ENST00000561904 WRNQ14191 1432 aaPredicted RBP eCLIP31.68■■■□□ 2.66
E2F4-202ENST00000561904 BIVM-ERCC5R4GMW8 1640 aa31.67■■■□□ 2.66
E2F4-202ENST00000561904 TOP2BQ02880 1626 aa31.66■■■□□ 2.66
E2F4-202ENST00000561904 ADAMTS12P58397 1594 aa31.57■■■□□ 2.64
E2F4-202ENST00000561904 GRIN2AQ12879 1464 aa31.57■■■□□ 2.64
E2F4-202ENST00000561904 CEP170Q5SW79 1584 aa31.51■■■□□ 2.63
E2F4-202ENST00000561904 ERCC6L2Q5T890 1561 aa31.51■■■□□ 2.63
E2F4-202ENST00000561904 FHAD1B1AJZ9 1412 aa31.44■■■□□ 2.62
E2F4-202ENST00000561904 NUP160Q12769 1436 aa31.44■■■□□ 2.62
E2F4-202ENST00000561904 ERICH3Q5RHP9 1530 aa31.4■■■□□ 2.62
E2F4-202ENST00000561904 SHROOM2Q13796 1616 aa31.32■■■□□ 2.6
E2F4-202ENST00000561904 PRG4Q92954 1404 aaPredicted RBP31.18■■■□□ 2.58
E2F4-202ENST00000561904 JPH4Q96JJ6 628 aa31.14■■■□□ 2.58
E2F4-202ENST00000561904 RUSC2Q8N2Y8 1516 aa31.14■■■□□ 2.57
E2F4-202ENST00000561904 IGF1RP08069 1367 aa31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms