RNA–Protein interactions for RNA: ENST00000561848.1

MTHFSD-206, Transcript of methenyltetrahydrofolate synthetase domain containing, humanhuman

TSL 2

Gene MTHFSD, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFSD-206ENST00000561848 NISCHQ9Y2I1 1504 aa50.27■■■■■ 5.64
MTHFSD-206ENST00000561848 ABCC9O60706 1549 aa44.64■■■■■ 4.74
MTHFSD-206ENST00000561848 CCDC180Q9P1Z9 1646 aa44.64■■■■■ 4.74
MTHFSD-206ENST00000561848 RB1CC1Q8TDY2 1594 aa42.43■■■■■ 4.38
MTHFSD-206ENST00000561848 DCAF8L2P0C7V8 631 aa42.29■■■■■ 4.36
MTHFSD-206ENST00000561848 NACADO15069 1562 aa42.13■■■■■ 4.33
MTHFSD-206ENST00000561848 ZCCHC6Q5VYS8 1495 aaKnown RBP41.95■■■■■ 4.31
MTHFSD-206ENST00000561848 MYO15BQ96JP2 1530 aa41.78■■■■■ 4.28
MTHFSD-206ENST00000561848 DCAF1Q9Y4B6 1507 aa41.72■■■■■ 4.27
MTHFSD-206ENST00000561848 PABPN1Q86U42 306 aaKnown RBP eCLIP41.63■■■■■ 4.25
MTHFSD-206ENST00000561848 DNAJC5BQ9UF47 199 aa41.55■■■■■ 4.24
MTHFSD-206ENST00000561848 UNC13AQ9UPW8 1703 aa41.5■■■■■ 4.23
MTHFSD-206ENST00000561848 BICRAQ9NZM4 1560 aa41.2■■■■■ 4.19
MTHFSD-206ENST00000561848 SCRIBQ14160 1630 aa40.96■■■■■ 4.15
MTHFSD-206ENST00000561848 SHROOM4Q9ULL8 1493 aa40.5■■■■■ 4.07
MTHFSD-206ENST00000561848 CC2D2AQ9P2K1 1620 aa40.24■■■■■ 4.03
MTHFSD-206ENST00000561848 EIF4G1Q04637 1599 aaKnown RBP40.2■■■■■ 4.03
MTHFSD-206ENST00000561848 CECR2Q9BXF3 1484 aa40.1■■■■■ 4.01
MTHFSD-206ENST00000561848 BAZ1AQ9NRL2 1556 aaPredicted RBP38.95■■■■□ 3.83
MTHFSD-206ENST00000561848 SMARCA4P51532 1647 aa38.95■■■■□ 3.83
MTHFSD-206ENST00000561848 ATAD2BQ9ULI0 1458 aa38.9■■■■□ 3.82
MTHFSD-206ENST00000561848 NCAPD3P42695 1498 aa38.87■■■■□ 3.81
MTHFSD-206ENST00000561848 SMARCA2P51531 1590 aa38.76■■■■□ 3.8
MTHFSD-206ENST00000561848 MROH2BQ7Z745 1585 aa38.68■■■■□ 3.78
MTHFSD-206ENST00000561848 HMGXB3Q12766 1538 aa38.66■■■■□ 3.78
MTHFSD-206ENST00000561848 BAZ1BQ9UIG0 1483 aaKnown RBP38.6■■■■□ 3.77
MTHFSD-206ENST00000561848 PEG3Q9GZU2 1588 aa38.57■■■■□ 3.77
MTHFSD-206ENST00000561848 ERCC6Q03468 1493 aa38.51■■■■□ 3.76
MTHFSD-206ENST00000561848 RSF1Q96T23 1441 aaPredicted RBP38.45■■■■□ 3.75
MTHFSD-206ENST00000561848 NESP48681 1621 aa38.41■■■■□ 3.74
MTHFSD-206ENST00000561848 WIZO95785 1651 aa38.24■■■■□ 3.71
MTHFSD-206ENST00000561848 CUX2O14529 1486 aa38.17■■■■□ 3.7
MTHFSD-206ENST00000561848 LAMC3Q9Y6N6 1575 aa38.01■■■■□ 3.67
MTHFSD-206ENST00000561848 TOP2AP11388 1531 aaKnown RBP37.95■■■■□ 3.67
MTHFSD-206ENST00000561848 THOC2Q8NI27 1593 aaKnown RBP37.89■■■■□ 3.66
MTHFSD-206ENST00000561848 KIF21AQ7Z4S6 1674 aa37.88■■■■□ 3.66
MTHFSD-206ENST00000561848 DNAJC5Q9H3Z4 198 aa37.84■■■■□ 3.65
MTHFSD-206ENST00000561848 PDS5BQ9NTI5 1447 aa37.79■■■■□ 3.64
MTHFSD-206ENST00000561848 CADPSQ9ULU8 1353 aa37.77■■■■□ 3.64
MTHFSD-206ENST00000561848 SUPT5HO00267 1087 aaKnown RBP37.71■■■■□ 3.63
MTHFSD-206ENST00000561848 MRC2Q9UBG0 1479 aa37.52■■■■□ 3.6
MTHFSD-206ENST00000561848 CCDC88BA6NC98 1476 aa37.5■■■■□ 3.59
MTHFSD-206ENST00000561848 CEP164Q9UPV0 1460 aa37.45■■■■□ 3.59
MTHFSD-206ENST00000561848 FANCD2Q9BXW9 1451 aa37.43■■■■□ 3.58
MTHFSD-206ENST00000561848 WDR62O43379 1518 aa37.38■■■■□ 3.57
MTHFSD-206ENST00000561848 CFTRP13569 1480 aa37.38■■■■□ 3.57
MTHFSD-206ENST00000561848 URB2Q14146 1524 aaKnown RBP37.11■■■■□ 3.53
MTHFSD-206ENST00000561848 PRDM2Q13029 1718 aa37.03■■■■□ 3.52
MTHFSD-206ENST00000561848 TOPBP1Q92547 1522 aa36.74■■■■□ 3.47
MTHFSD-206ENST00000561848 ZNF608Q9ULD9 1512 aaPredicted RBP36.66■■■■□ 3.46
MTHFSD-206ENST00000561848 IFT140Q96RY7 1462 aa36.62■■■■□ 3.45
MTHFSD-206ENST00000561848 DNMBPQ6XZF7 1577 aa36.61■■■■□ 3.45
MTHFSD-206ENST00000561848 TRIM41Q8WV44 630 aa36.59■■■■□ 3.45
MTHFSD-206ENST00000561848 ABCC8Q09428 1581 aa36.58■■■■□ 3.45
MTHFSD-206ENST00000561848 OSCARQ8IYS5 282 aa36.48■■■■□ 3.43
MTHFSD-206ENST00000561848 EIF4G3O43432 1585 aaKnown RBP36.46■■■■□ 3.43
MTHFSD-206ENST00000561848 POLA1P09884 1462 aaPredicted RBP36.39■■■■□ 3.42
MTHFSD-206ENST00000561848 TARBP1Q13395 1621 aaKnown RBP36.35■■■■□ 3.41
MTHFSD-206ENST00000561848 AQRO60306 1485 aaKnown RBP eCLIP36.35■■■■□ 3.41
MTHFSD-206ENST00000561848 RAD54L2Q9Y4B4 1467 aa36.32■■■■□ 3.41
MTHFSD-206ENST00000561848 CUX1P39880 1505 aa36.26■■■■□ 3.4
MTHFSD-206ENST00000561848 WRNQ14191 1432 aaPredicted RBP eCLIP36.25■■■■□ 3.39
MTHFSD-206ENST00000561848 FGD5Q6ZNL6 1462 aa36.24■■■■□ 3.39
MTHFSD-206ENST00000561848 SOGA1O94964 1423 aa36.2■■■■□ 3.39
MTHFSD-206ENST00000561848 TDRD9Q8NDG6 1382 aaKnown RBP36.17■■■■□ 3.38
MTHFSD-206ENST00000561848 FBLN2P98095 1184 aa36.15■■■■□ 3.38
MTHFSD-206ENST00000561848 CHD1O14646 1710 aa36.13■■■■□ 3.37
MTHFSD-206ENST00000561848 TOP2BQ02880 1626 aa36.12■■■■□ 3.37
MTHFSD-206ENST00000561848 RIMBP3CA6NJZ7 1639 aa36.09■■■■□ 3.37
MTHFSD-206ENST00000561848 RIMBP3BA6NNM3 1639 aa36.09■■■■□ 3.37
MTHFSD-206ENST00000561848 RIMBP3Q9UFD9 1639 aa36.09■■■■□ 3.37
MTHFSD-206ENST00000561848 BIVM-ERCC5R4GMW8 1640 aa36.09■■■■□ 3.37
MTHFSD-206ENST00000561848 SYNJ1O43426 1573 aa36.04■■■■□ 3.36
MTHFSD-206ENST00000561848 SNAPC4Q5SXM2 1469 aa36.01■■■■□ 3.36
MTHFSD-206ENST00000561848 ARHGEF11O15085 1522 aa35.99■■■■□ 3.35
MTHFSD-206ENST00000561848 WDR97A6NE52 1622 aa35.9■■■■□ 3.34
MTHFSD-206ENST00000561848 GRIN2BQ13224 1484 aa35.85■■■■□ 3.33
MTHFSD-206ENST00000561848 ABCA10Q8WWZ4 1543 aa35.83■■■■□ 3.33
MTHFSD-206ENST00000561848 CHMP7Q8WUX9 453 aaPredicted RBP35.8■■■■□ 3.32
MTHFSD-206ENST00000561848 MAGI1Q96QZ7 1491 aaPredicted RBP35.79■■■■□ 3.32
MTHFSD-206ENST00000561848 PBRM1Q86U86 1689 aa35.78■■■■□ 3.32
MTHFSD-206ENST00000561848 GAPVD1Q14C86 1478 aa35.78■■■■□ 3.32
MTHFSD-206ENST00000561848 CYB5RLQ6IPT4 315 aa35.75■■■■□ 3.31
MTHFSD-206ENST00000561848 ABCA5Q8WWZ7 1642 aa35.71■■■■□ 3.31
MTHFSD-206ENST00000561848 SYNJ2O15056 1496 aa35.69■■■■□ 3.3
MTHFSD-206ENST00000561848 ARAP1Q96P48 1450 aa35.67■■■■□ 3.3
MTHFSD-206ENST00000561848 CLASP1Q7Z460 1538 aa35.65■■■■□ 3.3
MTHFSD-206ENST00000561848 CHIC1Q5VXU3 224 aa35.52■■■■□ 3.28
MTHFSD-206ENST00000561848 KIF27Q86VH2 1401 aa35.5■■■■□ 3.27
MTHFSD-206ENST00000561848 ADAMTS12P58397 1594 aa35.47■■■■□ 3.27
MTHFSD-206ENST00000561848 ERICH3Q5RHP9 1530 aa35.42■■■■□ 3.26
MTHFSD-206ENST00000561848 GRIN2AQ12879 1464 aa35.41■■■■□ 3.26
MTHFSD-206ENST00000561848 TRHP20396 242 aaPredicted RBP35.34■■■■□ 3.25
MTHFSD-206ENST00000561848 CEP170Q5SW79 1584 aa35.32■■■■□ 3.24
MTHFSD-206ENST00000561848 FHAD1B1AJZ9 1412 aa35.3■■■■□ 3.24
MTHFSD-206ENST00000561848 IGF1RP08069 1367 aa35.29■■■■□ 3.24
MTHFSD-206ENST00000561848 ERCC6L2Q5T890 1561 aa35.25■■■■□ 3.23
MTHFSD-206ENST00000561848 NUP160Q12769 1436 aa35.23■■■■□ 3.23
MTHFSD-206ENST00000561848 EEA1Q15075 1411 aa35.17■■■■□ 3.22
MTHFSD-206ENST00000561848 RUSC2Q8N2Y8 1516 aa35.16■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms