RNA–Protein interactions for RNA: ENST00000561823.1

MAP1LC3B-202, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-202ENST00000561823 NISCHQ9Y2I1 1504 aa42.87■■■■■ 4.45
MAP1LC3B-202ENST00000561823 CCDC180Q9P1Z9 1646 aa38.25■■■■□ 3.71
MAP1LC3B-202ENST00000561823 ABCC9O60706 1549 aa37.95■■■■□ 3.67
MAP1LC3B-202ENST00000561823 RB1CC1Q8TDY2 1594 aa36.27■■■■□ 3.4
MAP1LC3B-202ENST00000561823 NACADO15069 1562 aa36.14■■■■□ 3.38
MAP1LC3B-202ENST00000561823 DCAF8L2P0C7V8 631 aa36.06■■■■□ 3.36
MAP1LC3B-202ENST00000561823 MYO15BQ96JP2 1530 aa35.78■■■■□ 3.32
MAP1LC3B-202ENST00000561823 ZCCHC6Q5VYS8 1495 aaKnown RBP35.6■■■■□ 3.29
MAP1LC3B-202ENST00000561823 DCAF1Q9Y4B6 1507 aa35.45■■■■□ 3.27
MAP1LC3B-202ENST00000561823 PABPN1Q86U42 306 aaKnown RBP eCLIP35.43■■■■□ 3.26
MAP1LC3B-202ENST00000561823 UNC13AQ9UPW8 1703 aa35.36■■■■□ 3.25
MAP1LC3B-202ENST00000561823 DNAJC5BQ9UF47 199 aa35.34■■■■□ 3.25
MAP1LC3B-202ENST00000561823 BICRAQ9NZM4 1560 aa35.21■■■■□ 3.23
MAP1LC3B-202ENST00000561823 SCRIBQ14160 1630 aa34.88■■■■□ 3.17
MAP1LC3B-202ENST00000561823 SHROOM4Q9ULL8 1493 aa34.79■■■■□ 3.16
MAP1LC3B-202ENST00000561823 EIF4G1Q04637 1599 aaKnown RBP34.31■■■■□ 3.08
MAP1LC3B-202ENST00000561823 CC2D2AQ9P2K1 1620 aa34.28■■■■□ 3.08
MAP1LC3B-202ENST00000561823 CECR2Q9BXF3 1484 aa34.17■■■■□ 3.06
MAP1LC3B-202ENST00000561823 NCAPD3P42695 1498 aa33.39■■■□□ 2.94
MAP1LC3B-202ENST00000561823 SMARCA4P51532 1647 aa33.33■■■□□ 2.93
MAP1LC3B-202ENST00000561823 ATAD2BQ9ULI0 1458 aa33.32■■■□□ 2.92
MAP1LC3B-202ENST00000561823 BAZ1AQ9NRL2 1556 aaPredicted RBP33.24■■■□□ 2.91
MAP1LC3B-202ENST00000561823 SMARCA2P51531 1590 aa33.22■■■□□ 2.91
MAP1LC3B-202ENST00000561823 HMGXB3Q12766 1538 aa33.12■■■□□ 2.89
MAP1LC3B-202ENST00000561823 MROH2BQ7Z745 1585 aa33.03■■■□□ 2.88
MAP1LC3B-202ENST00000561823 PEG3Q9GZU2 1588 aa33.03■■■□□ 2.88
MAP1LC3B-202ENST00000561823 BAZ1BQ9UIG0 1483 aaKnown RBP32.99■■■□□ 2.87
MAP1LC3B-202ENST00000561823 ERCC6Q03468 1493 aa32.74■■■□□ 2.83
MAP1LC3B-202ENST00000561823 NESP48681 1621 aa32.7■■■□□ 2.83
MAP1LC3B-202ENST00000561823 WIZO95785 1651 aa32.61■■■□□ 2.81
MAP1LC3B-202ENST00000561823 CUX2O14529 1486 aa32.58■■■□□ 2.81
MAP1LC3B-202ENST00000561823 LAMC3Q9Y6N6 1575 aa32.53■■■□□ 2.8
MAP1LC3B-202ENST00000561823 RSF1Q96T23 1441 aaPredicted RBP32.51■■■□□ 2.79
MAP1LC3B-202ENST00000561823 CADPSQ9ULU8 1353 aa32.4■■■□□ 2.78
MAP1LC3B-202ENST00000561823 PDS5BQ9NTI5 1447 aa32.37■■■□□ 2.77
MAP1LC3B-202ENST00000561823 THOC2Q8NI27 1593 aaKnown RBP32.27■■■□□ 2.76
MAP1LC3B-202ENST00000561823 TOP2AP11388 1531 aaKnown RBP32.26■■■□□ 2.75
MAP1LC3B-202ENST00000561823 KIF21AQ7Z4S6 1674 aa32.23■■■□□ 2.75
MAP1LC3B-202ENST00000561823 DNAJC5Q9H3Z4 198 aa32.2■■■□□ 2.75
MAP1LC3B-202ENST00000561823 CFTRP13569 1480 aa32.09■■■□□ 2.73
MAP1LC3B-202ENST00000561823 MRC2Q9UBG0 1479 aa32.04■■■□□ 2.72
MAP1LC3B-202ENST00000561823 FANCD2Q9BXW9 1451 aa31.99■■■□□ 2.71
MAP1LC3B-202ENST00000561823 CEP164Q9UPV0 1460 aa31.98■■■□□ 2.71
MAP1LC3B-202ENST00000561823 WDR62O43379 1518 aa31.94■■■□□ 2.7
MAP1LC3B-202ENST00000561823 CCDC88BA6NC98 1476 aa31.91■■■□□ 2.7
MAP1LC3B-202ENST00000561823 URB2Q14146 1524 aaKnown RBP31.7■■■□□ 2.67
MAP1LC3B-202ENST00000561823 PRDM2Q13029 1718 aa31.66■■■□□ 2.66
MAP1LC3B-202ENST00000561823 TOPBP1Q92547 1522 aa31.42■■■□□ 2.62
MAP1LC3B-202ENST00000561823 ABCC8Q09428 1581 aa31.4■■■□□ 2.62
MAP1LC3B-202ENST00000561823 IFT140Q96RY7 1462 aa31.34■■■□□ 2.61
MAP1LC3B-202ENST00000561823 SUPT5HO00267 1087 aaKnown RBP31.33■■■□□ 2.61
MAP1LC3B-202ENST00000561823 DNMBPQ6XZF7 1577 aa31.32■■■□□ 2.6
MAP1LC3B-202ENST00000561823 ZNF608Q9ULD9 1512 aaPredicted RBP31.25■■■□□ 2.59
MAP1LC3B-202ENST00000561823 OSCARQ8IYS5 282 aa31.2■■■□□ 2.59
MAP1LC3B-202ENST00000561823 POLA1P09884 1462 aaPredicted RBP31.13■■■□□ 2.57
MAP1LC3B-202ENST00000561823 TARBP1Q13395 1621 aaKnown RBP31.09■■■□□ 2.57
MAP1LC3B-202ENST00000561823 EIF4G3O43432 1585 aaKnown RBP31.05■■■□□ 2.56
MAP1LC3B-202ENST00000561823 AQRO60306 1485 aaKnown RBP eCLIP31.03■■■□□ 2.56
MAP1LC3B-202ENST00000561823 SOGA1O94964 1423 aa31.02■■■□□ 2.56
MAP1LC3B-202ENST00000561823 CUX1P39880 1505 aa31.01■■■□□ 2.55
MAP1LC3B-202ENST00000561823 RAD54L2Q9Y4B4 1467 aa31.01■■■□□ 2.55
MAP1LC3B-202ENST00000561823 FGD5Q6ZNL6 1462 aa30.97■■■□□ 2.55
MAP1LC3B-202ENST00000561823 TDRD9Q8NDG6 1382 aaKnown RBP30.91■■■□□ 2.54
MAP1LC3B-202ENST00000561823 TRIM41Q8WV44 630 aa30.9■■■□□ 2.54
MAP1LC3B-202ENST00000561823 WDR97A6NE52 1622 aa30.81■■■□□ 2.52
MAP1LC3B-202ENST00000561823 FBLN2P98095 1184 aa30.76■■■□□ 2.51
MAP1LC3B-202ENST00000561823 CHD1O14646 1710 aa30.72■■■□□ 2.51
MAP1LC3B-202ENST00000561823 SNAPC4Q5SXM2 1469 aa30.7■■■□□ 2.51
MAP1LC3B-202ENST00000561823 GRIN2BQ13224 1484 aa30.7■■■□□ 2.5
MAP1LC3B-202ENST00000561823 ABCA10Q8WWZ4 1543 aa30.67■■■□□ 2.5
MAP1LC3B-202ENST00000561823 RIMBP3CA6NJZ7 1639 aa30.66■■■□□ 2.5
MAP1LC3B-202ENST00000561823 RIMBP3BA6NNM3 1639 aa30.66■■■□□ 2.5
MAP1LC3B-202ENST00000561823 RIMBP3Q9UFD9 1639 aa30.66■■■□□ 2.5
MAP1LC3B-202ENST00000561823 MAGI1Q96QZ7 1491 aaPredicted RBP30.65■■■□□ 2.5
MAP1LC3B-202ENST00000561823 WRNQ14191 1432 aaPredicted RBP eCLIP30.64■■■□□ 2.5
MAP1LC3B-202ENST00000561823 ARHGEF11O15085 1522 aa30.63■■■□□ 2.49
MAP1LC3B-202ENST00000561823 GAPVD1Q14C86 1478 aa30.63■■■□□ 2.49
MAP1LC3B-202ENST00000561823 CHMP7Q8WUX9 453 aaPredicted RBP30.61■■■□□ 2.49
MAP1LC3B-202ENST00000561823 TOP2BQ02880 1626 aa30.59■■■□□ 2.49
MAP1LC3B-202ENST00000561823 BIVM-ERCC5R4GMW8 1640 aa30.57■■■□□ 2.48
MAP1LC3B-202ENST00000561823 SYNJ1O43426 1573 aa30.56■■■□□ 2.48
MAP1LC3B-202ENST00000561823 SYNJ2O15056 1496 aa30.55■■■□□ 2.48
MAP1LC3B-202ENST00000561823 ABCA5Q8WWZ7 1642 aa30.55■■■□□ 2.48
MAP1LC3B-202ENST00000561823 PBRM1Q86U86 1689 aa30.5■■■□□ 2.47
MAP1LC3B-202ENST00000561823 CLASP1Q7Z460 1538 aa30.44■■■□□ 2.46
MAP1LC3B-202ENST00000561823 CYB5RLQ6IPT4 315 aa30.44■■■□□ 2.46
MAP1LC3B-202ENST00000561823 ARAP1Q96P48 1450 aa30.37■■■□□ 2.45
MAP1LC3B-202ENST00000561823 GRIN2AQ12879 1464 aa30.29■■■□□ 2.44
MAP1LC3B-202ENST00000561823 ADAMTS12P58397 1594 aa30.28■■■□□ 2.44
MAP1LC3B-202ENST00000561823 ERICH3Q5RHP9 1530 aa30.27■■■□□ 2.44
MAP1LC3B-202ENST00000561823 FHAD1B1AJZ9 1412 aa30.27■■■□□ 2.44
MAP1LC3B-202ENST00000561823 NUP160Q12769 1436 aa30.2■■■□□ 2.42
MAP1LC3B-202ENST00000561823 CEP170Q5SW79 1584 aa30.14■■■□□ 2.42
MAP1LC3B-202ENST00000561823 KIF27Q86VH2 1401 aa30.05■■■□□ 2.4
MAP1LC3B-202ENST00000561823 IGF1RP08069 1367 aa30.03■■■□□ 2.4
MAP1LC3B-202ENST00000561823 ERCC6L2Q5T890 1561 aa29.99■■■□□ 2.39
MAP1LC3B-202ENST00000561823 SHROOM2Q13796 1616 aa29.97■■■□□ 2.39
MAP1LC3B-202ENST00000561823 TRHP20396 242 aaPredicted RBP29.96■■■□□ 2.39
MAP1LC3B-202ENST00000561823 JPH4Q96JJ6 628 aa29.92■■■□□ 2.38
MAP1LC3B-202ENST00000561823 PRG4Q92954 1404 aaPredicted RBP29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms