RNA–Protein interactions for RNA: ENST00000561785.5

TGFB1I1-204, transforming growth factor beta 1 induced transcript 1, humanhuman

TSL 4

Gene TGFB1I1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1I1-204ENST00000561785 NISCHQ9Y2I1 1504 aa35.15■■■■□ 3.22
TGFB1I1-204ENST00000561785 ABCC9O60706 1549 aa31.59■■■□□ 2.65
TGFB1I1-204ENST00000561785 CCDC180Q9P1Z9 1646 aa31.49■■■□□ 2.63
TGFB1I1-204ENST00000561785 RB1CC1Q8TDY2 1594 aa30■■■□□ 2.39
TGFB1I1-204ENST00000561785 NACADO15069 1562 aa29.81■■■□□ 2.36
TGFB1I1-204ENST00000561785 DNAJC5BQ9UF47 199 aa29.75■■■□□ 2.35
TGFB1I1-204ENST00000561785 DCAF8L2P0C7V8 631 aa29.64■■■□□ 2.34
TGFB1I1-204ENST00000561785 PABPN1Q86U42 306 aaKnown RBP eCLIP29.43■■■□□ 2.3
TGFB1I1-204ENST00000561785 MYO15BQ96JP2 1530 aa29.41■■■□□ 2.3
TGFB1I1-204ENST00000561785 UNC13AQ9UPW8 1703 aa29.34■■■□□ 2.29
TGFB1I1-204ENST00000561785 BICRAQ9NZM4 1560 aa29.21■■■□□ 2.27
TGFB1I1-204ENST00000561785 ZCCHC6Q5VYS8 1495 aaKnown RBP29.12■■■□□ 2.25
TGFB1I1-204ENST00000561785 DCAF1Q9Y4B6 1507 aa29.02■■■□□ 2.24
TGFB1I1-204ENST00000561785 SHROOM4Q9ULL8 1493 aa28.74■■■□□ 2.19
TGFB1I1-204ENST00000561785 SCRIBQ14160 1630 aa28.72■■■□□ 2.19
TGFB1I1-204ENST00000561785 CC2D2AQ9P2K1 1620 aa28.52■■■□□ 2.16
TGFB1I1-204ENST00000561785 EIF4G1Q04637 1599 aaKnown RBP28.46■■■□□ 2.15
TGFB1I1-204ENST00000561785 CECR2Q9BXF3 1484 aa28.46■■■□□ 2.15
TGFB1I1-204ENST00000561785 NCAPD3P42695 1498 aa27.56■■■□□ 2
TGFB1I1-204ENST00000561785 ATAD2BQ9ULI0 1458 aa27.47■■□□□ 1.99
TGFB1I1-204ENST00000561785 SMARCA4P51532 1647 aa27.4■■□□□ 1.98
TGFB1I1-204ENST00000561785 SMARCA2P51531 1590 aa27.34■■□□□ 1.97
TGFB1I1-204ENST00000561785 HMGXB3Q12766 1538 aa27.32■■□□□ 1.96
TGFB1I1-204ENST00000561785 DNAJC5Q9H3Z4 198 aa27.3■■□□□ 1.96
TGFB1I1-204ENST00000561785 BAZ1AQ9NRL2 1556 aaPredicted RBP27.25■■□□□ 1.95
TGFB1I1-204ENST00000561785 ERCC6Q03468 1493 aa27.23■■□□□ 1.95
TGFB1I1-204ENST00000561785 CUX2O14529 1486 aa27.21■■□□□ 1.95
TGFB1I1-204ENST00000561785 BAZ1BQ9UIG0 1483 aaKnown RBP27.16■■□□□ 1.94
TGFB1I1-204ENST00000561785 PEG3Q9GZU2 1588 aa27.15■■□□□ 1.94
TGFB1I1-204ENST00000561785 NESP48681 1621 aa27.15■■□□□ 1.94
TGFB1I1-204ENST00000561785 MROH2BQ7Z745 1585 aa27.09■■□□□ 1.93
TGFB1I1-204ENST00000561785 LAMC3Q9Y6N6 1575 aa26.9■■□□□ 1.9
TGFB1I1-204ENST00000561785 THOC2Q8NI27 1593 aaKnown RBP26.85■■□□□ 1.89
TGFB1I1-204ENST00000561785 KIF21AQ7Z4S6 1674 aa26.75■■□□□ 1.87
TGFB1I1-204ENST00000561785 PDS5BQ9NTI5 1447 aa26.74■■□□□ 1.87
TGFB1I1-204ENST00000561785 WIZO95785 1651 aa26.74■■□□□ 1.87
TGFB1I1-204ENST00000561785 CADPSQ9ULU8 1353 aa26.71■■□□□ 1.87
TGFB1I1-204ENST00000561785 RSF1Q96T23 1441 aaPredicted RBP26.53■■□□□ 1.84
TGFB1I1-204ENST00000561785 MRC2Q9UBG0 1479 aa26.53■■□□□ 1.84
TGFB1I1-204ENST00000561785 WDR62O43379 1518 aa26.48■■□□□ 1.83
TGFB1I1-204ENST00000561785 CFTRP13569 1480 aa26.41■■□□□ 1.82
TGFB1I1-204ENST00000561785 CEP164Q9UPV0 1460 aa26.4■■□□□ 1.82
TGFB1I1-204ENST00000561785 TOP2AP11388 1531 aaKnown RBP26.39■■□□□ 1.82
TGFB1I1-204ENST00000561785 FANCD2Q9BXW9 1451 aa26.39■■□□□ 1.82
TGFB1I1-204ENST00000561785 URB2Q14146 1524 aaKnown RBP26.2■■□□□ 1.79
TGFB1I1-204ENST00000561785 CCDC88BA6NC98 1476 aa26.12■■□□□ 1.77
TGFB1I1-204ENST00000561785 PRDM2Q13029 1718 aa26.05■■□□□ 1.76
TGFB1I1-204ENST00000561785 TRIM41Q8WV44 630 aa26.04■■□□□ 1.76
TGFB1I1-204ENST00000561785 OSCARQ8IYS5 282 aa25.98■■□□□ 1.75
TGFB1I1-204ENST00000561785 TOPBP1Q92547 1522 aa25.9■■□□□ 1.74
TGFB1I1-204ENST00000561785 ZNF608Q9ULD9 1512 aaPredicted RBP25.9■■□□□ 1.74
TGFB1I1-204ENST00000561785 IFT140Q96RY7 1462 aa25.89■■□□□ 1.73
TGFB1I1-204ENST00000561785 ABCC8Q09428 1581 aa25.8■■□□□ 1.72
TGFB1I1-204ENST00000561785 DNMBPQ6XZF7 1577 aa25.78■■□□□ 1.72
TGFB1I1-204ENST00000561785 EIF4G3O43432 1585 aaKnown RBP25.7■■□□□ 1.71
TGFB1I1-204ENST00000561785 TARBP1Q13395 1621 aaKnown RBP25.67■■□□□ 1.7
TGFB1I1-204ENST00000561785 AQRO60306 1485 aaKnown RBP eCLIP25.65■■□□□ 1.7
TGFB1I1-204ENST00000561785 RIMBP3CA6NJZ7 1639 aa25.64■■□□□ 1.7
TGFB1I1-204ENST00000561785 RIMBP3BA6NNM3 1639 aa25.64■■□□□ 1.7
TGFB1I1-204ENST00000561785 RIMBP3Q9UFD9 1639 aa25.64■■□□□ 1.7
TGFB1I1-204ENST00000561785 POLA1P09884 1462 aaPredicted RBP25.64■■□□□ 1.69
TGFB1I1-204ENST00000561785 ARHGEF11O15085 1522 aa25.57■■□□□ 1.68
TGFB1I1-204ENST00000561785 RAD54L2Q9Y4B4 1467 aa25.56■■□□□ 1.68
TGFB1I1-204ENST00000561785 SOGA1O94964 1423 aa25.51■■□□□ 1.67
TGFB1I1-204ENST00000561785 CHD1O14646 1710 aa25.51■■□□□ 1.67
TGFB1I1-204ENST00000561785 TDRD9Q8NDG6 1382 aaKnown RBP25.48■■□□□ 1.67
TGFB1I1-204ENST00000561785 FGD5Q6ZNL6 1462 aa25.47■■□□□ 1.67
TGFB1I1-204ENST00000561785 CUX1P39880 1505 aa25.46■■□□□ 1.67
TGFB1I1-204ENST00000561785 FBLN2P98095 1184 aa25.44■■□□□ 1.66
TGFB1I1-204ENST00000561785 CYB5RLQ6IPT4 315 aa25.39■■□□□ 1.66
TGFB1I1-204ENST00000561785 SNAPC4Q5SXM2 1469 aa25.36■■□□□ 1.65
TGFB1I1-204ENST00000561785 WDR97A6NE52 1622 aa25.36■■□□□ 1.65
TGFB1I1-204ENST00000561785 ARAP1Q96P48 1450 aa25.34■■□□□ 1.65
TGFB1I1-204ENST00000561785 MAGI1Q96QZ7 1491 aaPredicted RBP25.28■■□□□ 1.64
TGFB1I1-204ENST00000561785 SUPT5HO00267 1087 aaKnown RBP25.28■■□□□ 1.64
TGFB1I1-204ENST00000561785 GRIN2BQ13224 1484 aa25.28■■□□□ 1.64
TGFB1I1-204ENST00000561785 CHMP7Q8WUX9 453 aaPredicted RBP25.25■■□□□ 1.63
TGFB1I1-204ENST00000561785 CLASP1Q7Z460 1538 aa25.25■■□□□ 1.63
TGFB1I1-204ENST00000561785 SYNJ2O15056 1496 aa25.21■■□□□ 1.63
TGFB1I1-204ENST00000561785 GAPVD1Q14C86 1478 aa25.19■■□□□ 1.62
TGFB1I1-204ENST00000561785 SYNJ1O43426 1573 aa25.18■■□□□ 1.62
TGFB1I1-204ENST00000561785 ABCA10Q8WWZ4 1543 aa25.17■■□□□ 1.62
TGFB1I1-204ENST00000561785 PBRM1Q86U86 1689 aa25.15■■□□□ 1.62
TGFB1I1-204ENST00000561785 ABCA5Q8WWZ7 1642 aa25.13■■□□□ 1.61
TGFB1I1-204ENST00000561785 TRHP20396 242 aaPredicted RBP25.08■■□□□ 1.61
TGFB1I1-204ENST00000561785 WRNQ14191 1432 aaPredicted RBP eCLIP25.04■■□□□ 1.6
TGFB1I1-204ENST00000561785 TOP2BQ02880 1626 aa25.01■■□□□ 1.59
TGFB1I1-204ENST00000561785 BIVM-ERCC5R4GMW8 1640 aa25■■□□□ 1.59
TGFB1I1-204ENST00000561785 GRIN2AQ12879 1464 aa24.96■■□□□ 1.59
TGFB1I1-204ENST00000561785 ADAMTS12P58397 1594 aa24.93■■□□□ 1.58
TGFB1I1-204ENST00000561785 NUP160Q12769 1436 aa24.91■■□□□ 1.58
TGFB1I1-204ENST00000561785 CEP170Q5SW79 1584 aa24.88■■□□□ 1.57
TGFB1I1-204ENST00000561785 ERCC6L2Q5T890 1561 aa24.88■■□□□ 1.57
TGFB1I1-204ENST00000561785 FHAD1B1AJZ9 1412 aa24.87■■□□□ 1.57
TGFB1I1-204ENST00000561785 ERICH3Q5RHP9 1530 aa24.84■■□□□ 1.57
TGFB1I1-204ENST00000561785 SHROOM2Q13796 1616 aa24.78■■□□□ 1.56
TGFB1I1-204ENST00000561785 PRG4Q92954 1404 aaPredicted RBP24.65■■□□□ 1.54
TGFB1I1-204ENST00000561785 JPH4Q96JJ6 628 aa24.64■■□□□ 1.54
TGFB1I1-204ENST00000561785 RUSC2Q8N2Y8 1516 aa24.59■■□□□ 1.53
TGFB1I1-204ENST00000561785 IGF1RP08069 1367 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms