RNA–Protein interactions for RNA: ENST00000561728.1

AC010542.3-202, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC010542.3, Length 701 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC010542.3-202ENST00000561728 NISCHQ9Y2I1 1504 aa25.2■■□□□ 1.62
AC010542.3-202ENST00000561728 ABCC9O60706 1549 aa24.71■■□□□ 1.55
AC010542.3-202ENST00000561728 DNAJC5BQ9UF47 199 aa24.41■■□□□ 1.5
AC010542.3-202ENST00000561728 DNAJC5Q9H3Z4 198 aa23.53■■□□□ 1.36
AC010542.3-202ENST00000561728 CCDC180Q9P1Z9 1646 aa23.24■■□□□ 1.31
AC010542.3-202ENST00000561728 RB1CC1Q8TDY2 1594 aa22.87■■□□□ 1.25
AC010542.3-202ENST00000561728 PABPN1Q86U42 306 aaKnown RBP eCLIP22.79■■□□□ 1.24
AC010542.3-202ENST00000561728 CECR2Q9BXF3 1484 aa22.41■■□□□ 1.18
AC010542.3-202ENST00000561728 NACADO15069 1562 aa22.34■■□□□ 1.17
AC010542.3-202ENST00000561728 UNC13AQ9UPW8 1703 aa22.26■■□□□ 1.15
AC010542.3-202ENST00000561728 CC2D2AQ9P2K1 1620 aa22.21■■□□□ 1.15
AC010542.3-202ENST00000561728 BICRAQ9NZM4 1560 aa22.18■■□□□ 1.14
AC010542.3-202ENST00000561728 DCAF8L2P0C7V8 631 aa22.03■■□□□ 1.12
AC010542.3-202ENST00000561728 TRIM41Q8WV44 630 aa21.98■■□□□ 1.11
AC010542.3-202ENST00000561728 CUX2O14529 1486 aa21.9■■□□□ 1.1
AC010542.3-202ENST00000561728 EIF4G1Q04637 1599 aaKnown RBP21.81■■□□□ 1.08
AC010542.3-202ENST00000561728 SHROOM4Q9ULL8 1493 aa21.8■■□□□ 1.08
AC010542.3-202ENST00000561728 AEBP2Q6ZN18 517 aaPredicted RBP21.58■■□□□ 1.05
AC010542.3-202ENST00000561728 CHIC1Q5VXU3 224 aa21.56■■□□□ 1.04
AC010542.3-202ENST00000561728 MYO15BQ96JP2 1530 aa21.53■■□□□ 1.04
AC010542.3-202ENST00000561728 ERCC6Q03468 1493 aa21.5■■□□□ 1.03
AC010542.3-202ENST00000561728 SCRIBQ14160 1630 aa21.16■□□□□ 0.98
AC010542.3-202ENST00000561728 THOC2Q8NI27 1593 aaKnown RBP20.85■□□□□ 0.93
AC010542.3-202ENST00000561728 NESP48681 1621 aa20.78■□□□□ 0.92
AC010542.3-202ENST00000561728 DCAF1Q9Y4B6 1507 aa20.71■□□□□ 0.91
AC010542.3-202ENST00000561728 OSCARQ8IYS5 282 aa20.69■□□□□ 0.9
AC010542.3-202ENST00000561728 SMARCA2P51531 1590 aa20.64■□□□□ 0.9
AC010542.3-202ENST00000561728 NCAPD3P42695 1498 aa20.63■□□□□ 0.89
AC010542.3-202ENST00000561728 BAZ1AQ9NRL2 1556 aaPredicted RBP20.63■□□□□ 0.89
AC010542.3-202ENST00000561728 TRHP20396 242 aaPredicted RBP20.6■□□□□ 0.89
AC010542.3-202ENST00000561728 ZCCHC6Q5VYS8 1495 aaKnown RBP20.57■□□□□ 0.88
AC010542.3-202ENST00000561728 RIMBP3CA6NJZ7 1639 aa20.52■□□□□ 0.88
AC010542.3-202ENST00000561728 RIMBP3BA6NNM3 1639 aa20.52■□□□□ 0.88
AC010542.3-202ENST00000561728 RIMBP3Q9UFD9 1639 aa20.52■□□□□ 0.88
AC010542.3-202ENST00000561728 KIF21AQ7Z4S6 1674 aa20.45■□□□□ 0.86
AC010542.3-202ENST00000561728 ILDR1Q86SU0 546 aaPredicted RBP20.42■□□□□ 0.86
AC010542.3-202ENST00000561728 LAMC3Q9Y6N6 1575 aa20.42■□□□□ 0.86
AC010542.3-202ENST00000561728 PDS5BQ9NTI5 1447 aa20.39■□□□□ 0.85
AC010542.3-202ENST00000561728 ATAD2BQ9ULI0 1458 aa20.37■□□□□ 0.85
AC010542.3-202ENST00000561728 HMGXB3Q12766 1538 aa20.35■□□□□ 0.85
AC010542.3-202ENST00000561728 ARHGEF11O15085 1522 aa20.32■□□□□ 0.84
AC010542.3-202ENST00000561728 CYB5RLQ6IPT4 315 aa20.3■□□□□ 0.84
AC010542.3-202ENST00000561728 MRC2Q9UBG0 1479 aa20.28■□□□□ 0.84
AC010542.3-202ENST00000561728 WDR62O43379 1518 aa20.25■□□□□ 0.83
AC010542.3-202ENST00000561728 BAZ1BQ9UIG0 1483 aaKnown RBP20.14■□□□□ 0.81
AC010542.3-202ENST00000561728 ARAP1Q96P48 1450 aa20.01■□□□□ 0.79
AC010542.3-202ENST00000561728 SMARCA4P51532 1647 aa19.98■□□□□ 0.79
AC010542.3-202ENST00000561728 CADPSQ9ULU8 1353 aa19.96■□□□□ 0.79
AC010542.3-202ENST00000561728 CEP164Q9UPV0 1460 aa19.92■□□□□ 0.78
AC010542.3-202ENST00000561728 PEG3Q9GZU2 1588 aa19.76■□□□□ 0.75
AC010542.3-202ENST00000561728 RSF1Q96T23 1441 aaPredicted RBP19.76■□□□□ 0.75
AC010542.3-202ENST00000561728 FANCD2Q9BXW9 1451 aa19.75■□□□□ 0.75
AC010542.3-202ENST00000561728 URB2Q14146 1524 aaKnown RBP19.65■□□□□ 0.74
AC010542.3-202ENST00000561728 ZNF608Q9ULD9 1512 aaPredicted RBP19.65■□□□□ 0.74
AC010542.3-202ENST00000561728 CHD1O14646 1710 aa19.59■□□□□ 0.73
AC010542.3-202ENST00000561728 IFT140Q96RY7 1462 aa19.57■□□□□ 0.72
AC010542.3-202ENST00000561728 FBLN2P98095 1184 aa19.56■□□□□ 0.72
AC010542.3-202ENST00000561728 KDM4FA0A1W2PPD8 638 aa19.49■□□□□ 0.71
AC010542.3-202ENST00000561728 EIF4G3O43432 1585 aaKnown RBP19.47■□□□□ 0.71
AC010542.3-202ENST00000561728 CFTRP13569 1480 aa19.41■□□□□ 0.7
AC010542.3-202ENST00000561728 MROH2BQ7Z745 1585 aa19.4■□□□□ 0.7
AC010542.3-202ENST00000561728 FBXO41Q8TF61 875 aa19.39■□□□□ 0.69
AC010542.3-202ENST00000561728 ERCC6L2Q5T890 1561 aa19.36■□□□□ 0.69
AC010542.3-202ENST00000561728 LMTK3Q96Q04 1460 aa19.36■□□□□ 0.69
AC010542.3-202ENST00000561728 CLASP1Q7Z460 1538 aa19.32■□□□□ 0.68
AC010542.3-202ENST00000561728 AQRO60306 1485 aaKnown RBP eCLIP19.31■□□□□ 0.68
AC010542.3-202ENST00000561728 GAPVD1Q14C86 1478 aa19.29■□□□□ 0.68
AC010542.3-202ENST00000561728 SOCS7O14512 581 aa19.24■□□□□ 0.67
AC010542.3-202ENST00000561728 SYNJ1O43426 1573 aa19.23■□□□□ 0.67
AC010542.3-202ENST00000561728 HECW2Q9P2P5 1572 aa19.21■□□□□ 0.67
AC010542.3-202ENST00000561728 TOPBP1Q92547 1522 aa19.19■□□□□ 0.66
AC010542.3-202ENST00000561728 KIF13AQ9H1H9 1805 aa19.17■□□□□ 0.66
AC010542.3-202ENST00000561728 CHMP7Q8WUX9 453 aaPredicted RBP19.16■□□□□ 0.66
AC010542.3-202ENST00000561728 TARBP1Q13395 1621 aaKnown RBP19.09■□□□□ 0.65
AC010542.3-202ENST00000561728 WIZO95785 1651 aa19.08■□□□□ 0.65
AC010542.3-202ENST00000561728 ABCC8Q09428 1581 aa19.08■□□□□ 0.65
AC010542.3-202ENST00000561728 SNAPC4Q5SXM2 1469 aa19.08■□□□□ 0.64
AC010542.3-202ENST00000561728 KDM6BO15054 1643 aa19.07■□□□□ 0.64
AC010542.3-202ENST00000561728 PRDM2Q13029 1718 aa19.06■□□□□ 0.64
AC010542.3-202ENST00000561728 ILDR2Q71H61 639 aa19.05■□□□□ 0.64
AC010542.3-202ENST00000561728 FAM69CQ0P6D2 419 aa19.02■□□□□ 0.64
AC010542.3-202ENST00000561728 SYNJ2O15056 1496 aa19.02■□□□□ 0.63
AC010542.3-202ENST00000561728 ADGRL1O94910 1474 aa19.02■□□□□ 0.63
AC010542.3-202ENST00000561728 DNMBPQ6XZF7 1577 aa19■□□□□ 0.63
AC010542.3-202ENST00000561728 MAGI1Q96QZ7 1491 aaPredicted RBP18.97■□□□□ 0.63
AC010542.3-202ENST00000561728 TDRD9Q8NDG6 1382 aaKnown RBP18.96■□□□□ 0.63
AC010542.3-202ENST00000561728 DISP3Q9P2K9 1392 aa18.96■□□□□ 0.63
AC010542.3-202ENST00000561728 ABCC10Q5T3U5 1492 aa18.92■□□□□ 0.62
AC010542.3-202ENST00000561728 POLA1P09884 1462 aaPredicted RBP18.9■□□□□ 0.62
AC010542.3-202ENST00000561728 PHF23Q9BUL5 403 aaPredicted RBP18.88■□□□□ 0.61
AC010542.3-202ENST00000561728 RAD54L2Q9Y4B4 1467 aa18.86■□□□□ 0.61
AC010542.3-202ENST00000561728 WDR97A6NE52 1622 aa18.84■□□□□ 0.61
AC010542.3-202ENST00000561728 GRIN2BQ13224 1484 aa18.82■□□□□ 0.6
AC010542.3-202ENST00000561728 SOGA1O94964 1423 aa18.82■□□□□ 0.6
AC010542.3-202ENST00000561728 DIP2BQ9P265 1576 aa18.81■□□□□ 0.6
AC010542.3-202ENST00000561728 NPM1P06748 294 aaKnown RBP eCLIP18.77■□□□□ 0.6
AC010542.3-202ENST00000561728 TOP2AP11388 1531 aaKnown RBP18.77■□□□□ 0.6
AC010542.3-202ENST00000561728 TSPOAP1O95153 1857 aa18.77■□□□□ 0.6
AC010542.3-202ENST00000561728 CEP170Q5SW79 1584 aa18.76■□□□□ 0.59
AC010542.3-202ENST00000561728 MAPKBP1O60336 1514 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms