RNA–Protein interactions for RNA: ENST00000561707.1

COTL1-202, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 1 (best)

Gene COTL1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-202ENST00000561707 NISCHQ9Y2I1 1504 aa29.86■■■□□ 2.37
COTL1-202ENST00000561707 CCDC180Q9P1Z9 1646 aa26.15■■□□□ 1.78
COTL1-202ENST00000561707 ABCC9O60706 1549 aa25.17■■□□□ 1.62
COTL1-202ENST00000561707 ZCCHC6Q5VYS8 1495 aaKnown RBP24.96■■□□□ 1.59
COTL1-202ENST00000561707 DCAF8L2P0C7V8 631 aa24.91■■□□□ 1.58
COTL1-202ENST00000561707 DCAF1Q9Y4B6 1507 aa24.62■■□□□ 1.53
COTL1-202ENST00000561707 NACADO15069 1562 aa24.47■■□□□ 1.51
COTL1-202ENST00000561707 MYO15BQ96JP2 1530 aa24.45■■□□□ 1.51
COTL1-202ENST00000561707 RB1CC1Q8TDY2 1594 aa24.35■■□□□ 1.49
COTL1-202ENST00000561707 SHROOM4Q9ULL8 1493 aa24.18■■□□□ 1.46
COTL1-202ENST00000561707 SCRIBQ14160 1630 aa24.06■■□□□ 1.44
COTL1-202ENST00000561707 UNC13AQ9UPW8 1703 aa23.92■■□□□ 1.42
COTL1-202ENST00000561707 PABPN1Q86U42 306 aaKnown RBP eCLIP23.73■■□□□ 1.39
COTL1-202ENST00000561707 BICRAQ9NZM4 1560 aa23.67■■□□□ 1.38
COTL1-202ENST00000561707 CECR2Q9BXF3 1484 aa23.28■■□□□ 1.32
COTL1-202ENST00000561707 SUPT5HO00267 1087 aaKnown RBP23.09■■□□□ 1.29
COTL1-202ENST00000561707 MROH2BQ7Z745 1585 aa23.08■■□□□ 1.29
COTL1-202ENST00000561707 RSF1Q96T23 1441 aaPredicted RBP23.04■■□□□ 1.28
COTL1-202ENST00000561707 BAZ1AQ9NRL2 1556 aaPredicted RBP23.04■■□□□ 1.28
COTL1-202ENST00000561707 SMARCA4P51532 1647 aa23.01■■□□□ 1.27
COTL1-202ENST00000561707 EIF4G1Q04637 1599 aaKnown RBP22.95■■□□□ 1.26
COTL1-202ENST00000561707 WIZO95785 1651 aa22.88■■□□□ 1.25
COTL1-202ENST00000561707 ATAD2BQ9ULI0 1458 aa22.75■■□□□ 1.23
COTL1-202ENST00000561707 CC2D2AQ9P2K1 1620 aa22.74■■□□□ 1.23
COTL1-202ENST00000561707 PEG3Q9GZU2 1588 aa22.71■■□□□ 1.23
COTL1-202ENST00000561707 SMARCA2P51531 1590 aa22.68■■□□□ 1.22
COTL1-202ENST00000561707 DNAJC5BQ9UF47 199 aa22.64■■□□□ 1.21
COTL1-202ENST00000561707 NCAPD3P42695 1498 aa22.6■■□□□ 1.21
COTL1-202ENST00000561707 BAZ1BQ9UIG0 1483 aaKnown RBP22.58■■□□□ 1.2
COTL1-202ENST00000561707 TOP2AP11388 1531 aaKnown RBP22.57■■□□□ 1.2
COTL1-202ENST00000561707 HMGXB3Q12766 1538 aa22.49■■□□□ 1.19
COTL1-202ENST00000561707 CCDC88BA6NC98 1476 aa22.4■■□□□ 1.18
COTL1-202ENST00000561707 CADPSQ9ULU8 1353 aa22.02■■□□□ 1.12
COTL1-202ENST00000561707 NESP48681 1621 aa21.99■■□□□ 1.11
COTL1-202ENST00000561707 CFTRP13569 1480 aa21.99■■□□□ 1.11
COTL1-202ENST00000561707 CHIC1Q5VXU3 224 aa21.9■■□□□ 1.1
COTL1-202ENST00000561707 LAMC3Q9Y6N6 1575 aa21.87■■□□□ 1.09
COTL1-202ENST00000561707 PRDM2Q13029 1718 aa21.85■■□□□ 1.09
COTL1-202ENST00000561707 ABCC8Q09428 1581 aa21.79■■□□□ 1.08
COTL1-202ENST00000561707 FANCD2Q9BXW9 1451 aa21.77■■□□□ 1.07
COTL1-202ENST00000561707 PDS5BQ9NTI5 1447 aa21.73■■□□□ 1.07
COTL1-202ENST00000561707 TRIM41Q8WV44 630 aa21.7■■□□□ 1.06
COTL1-202ENST00000561707 KIF21AQ7Z4S6 1674 aa21.69■■□□□ 1.06
COTL1-202ENST00000561707 WRNQ14191 1432 aaPredicted RBP eCLIP21.66■■□□□ 1.06
COTL1-202ENST00000561707 CEP164Q9UPV0 1460 aa21.64■■□□□ 1.05
COTL1-202ENST00000561707 SYNJ1O43426 1573 aa21.61■■□□□ 1.05
COTL1-202ENST00000561707 CUX1P39880 1505 aa21.6■■□□□ 1.05
COTL1-202ENST00000561707 ERCC6Q03468 1493 aa21.57■■□□□ 1.04
COTL1-202ENST00000561707 URB2Q14146 1524 aaKnown RBP21.54■■□□□ 1.04
COTL1-202ENST00000561707 TOP2BQ02880 1626 aa21.52■■□□□ 1.04
COTL1-202ENST00000561707 BIVM-ERCC5R4GMW8 1640 aa21.51■■□□□ 1.03
COTL1-202ENST00000561707 TOPBP1Q92547 1522 aa21.5■■□□□ 1.03
COTL1-202ENST00000561707 MRC2Q9UBG0 1479 aa21.48■■□□□ 1.03
COTL1-202ENST00000561707 DNMBPQ6XZF7 1577 aa21.48■■□□□ 1.03
COTL1-202ENST00000561707 FGD5Q6ZNL6 1462 aa21.4■■□□□ 1.02
COTL1-202ENST00000561707 THOC2Q8NI27 1593 aaKnown RBP21.39■■□□□ 1.01
COTL1-202ENST00000561707 WDR62O43379 1518 aa21.36■■□□□ 1.01
COTL1-202ENST00000561707 FAM9AQ8IZU1 332 aaPredicted RBP21.36■■□□□ 1.01
COTL1-202ENST00000561707 POLA1P09884 1462 aaPredicted RBP21.34■■□□□ 1.01
COTL1-202ENST00000561707 RAD54L2Q9Y4B4 1467 aa21.33■■□□□ 1.01
COTL1-202ENST00000561707 SOGA1O94964 1423 aa21.32■■□□□ 1
COTL1-202ENST00000561707 RUSC2Q8N2Y8 1516 aa21.3■■□□□ 1
COTL1-202ENST00000561707 CUX2O14529 1486 aa21.26■□□□□ 0.99
COTL1-202ENST00000561707 TARBP1Q13395 1621 aaKnown RBP21.2■□□□□ 0.98
COTL1-202ENST00000561707 ABCA10Q8WWZ4 1543 aa21.19■□□□□ 0.98
COTL1-202ENST00000561707 TDRD9Q8NDG6 1382 aaKnown RBP21.16■□□□□ 0.98
COTL1-202ENST00000561707 IFT140Q96RY7 1462 aa21.15■□□□□ 0.98
COTL1-202ENST00000561707 KIF27Q86VH2 1401 aa21.15■□□□□ 0.98
COTL1-202ENST00000561707 CSRNP3Q8WYN3 585 aa21.15■□□□□ 0.98
COTL1-202ENST00000561707 WDR97A6NE52 1622 aa21.15■□□□□ 0.98
COTL1-202ENST00000561707 EEA1Q15075 1411 aa21.12■□□□□ 0.97
COTL1-202ENST00000561707 LOC105371045A0A1W2PR82 267 aa21.11■□□□□ 0.97
COTL1-202ENST00000561707 ZNF608Q9ULD9 1512 aaPredicted RBP21.1■□□□□ 0.97
COTL1-202ENST00000561707 EHMT2Q96KQ7 1210 aa21.1■□□□□ 0.97
COTL1-202ENST00000561707 AQRO60306 1485 aaKnown RBP eCLIP21.08■□□□□ 0.97
COTL1-202ENST00000561707 IGF1RP08069 1367 aa21.06■□□□□ 0.96
COTL1-202ENST00000561707 GAPVD1Q14C86 1478 aa21.05■□□□□ 0.96
COTL1-202ENST00000561707 ABCA5Q8WWZ7 1642 aa21.03■□□□□ 0.96
COTL1-202ENST00000561707 EIF4G3O43432 1585 aaKnown RBP20.96■□□□□ 0.95
COTL1-202ENST00000561707 PBRM1Q86U86 1689 aa20.94■□□□□ 0.94
COTL1-202ENST00000561707 CARMIL1Q5VZK9 1371 aa20.94■□□□□ 0.94
COTL1-202ENST00000561707 GRIN2BQ13224 1484 aa20.93■□□□□ 0.94
COTL1-202ENST00000561707 ERICH3Q5RHP9 1530 aa20.91■□□□□ 0.94
COTL1-202ENST00000561707 PRXQ9BXM0 1461 aa20.91■□□□□ 0.94
COTL1-202ENST00000561707 RAPGEF2Q9Y4G8 1499 aa20.88■□□□□ 0.93
COTL1-202ENST00000561707 KIF21BO75037 1637 aa20.87■□□□□ 0.93
COTL1-202ENST00000561707 UBTFP17480 764 aaKnown RBP20.86■□□□□ 0.93
COTL1-202ENST00000561707 SNAPC4Q5SXM2 1469 aa20.84■□□□□ 0.93
COTL1-202ENST00000561707 CUL7Q14999 1698 aa20.83■□□□□ 0.93
COTL1-202ENST00000561707 GOLGA3Q08378 1498 aa20.83■□□□□ 0.93
COTL1-202ENST00000561707 FHAD1B1AJZ9 1412 aa20.8■□□□□ 0.92
COTL1-202ENST00000561707 ADAMTS12P58397 1594 aa20.78■□□□□ 0.92
COTL1-202ENST00000561707 MAGI1Q96QZ7 1491 aaPredicted RBP20.76■□□□□ 0.91
COTL1-202ENST00000561707 FBLN2P98095 1184 aa20.76■□□□□ 0.91
COTL1-202ENST00000561707 CHMP7Q8WUX9 453 aaPredicted RBP20.75■□□□□ 0.91
COTL1-202ENST00000561707 TNIKQ9UKE5 1360 aa20.73■□□□□ 0.91
COTL1-202ENST00000561707 SYNJ2O15056 1496 aa20.69■□□□□ 0.9
COTL1-202ENST00000561707 RANGAP1P46060 587 aaPredicted RBP20.68■□□□□ 0.9
COTL1-202ENST00000561707 GRIN2AQ12879 1464 aa20.66■□□□□ 0.9
COTL1-202ENST00000561707 CHD1O14646 1710 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms