RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 NISCHQ9Y2I1 1504 aa29.98■■■□□ 2.39
CMTM4-203ENST00000561680 CCDC180Q9P1Z9 1646 aa26.57■■□□□ 1.84
CMTM4-203ENST00000561680 ABCC9O60706 1549 aa25.28■■□□□ 1.64
CMTM4-203ENST00000561680 ZCCHC6Q5VYS8 1495 aaKnown RBP25.12■■□□□ 1.61
CMTM4-203ENST00000561680 DCAF1Q9Y4B6 1507 aa24.87■■□□□ 1.57
CMTM4-203ENST00000561680 MYO15BQ96JP2 1530 aa24.76■■□□□ 1.55
CMTM4-203ENST00000561680 NACADO15069 1562 aa24.74■■□□□ 1.55
CMTM4-203ENST00000561680 RB1CC1Q8TDY2 1594 aa24.64■■□□□ 1.54
CMTM4-203ENST00000561680 DCAF8L2P0C7V8 631 aa24.62■■□□□ 1.53
CMTM4-203ENST00000561680 UNC13AQ9UPW8 1703 aa24.3■■□□□ 1.48
CMTM4-203ENST00000561680 SCRIBQ14160 1630 aa24.2■■□□□ 1.46
CMTM4-203ENST00000561680 SHROOM4Q9ULL8 1493 aa23.91■■□□□ 1.42
CMTM4-203ENST00000561680 BICRAQ9NZM4 1560 aa23.91■■□□□ 1.42
CMTM4-203ENST00000561680 PABPN1Q86U42 306 aaKnown RBP eCLIP23.62■■□□□ 1.37
CMTM4-203ENST00000561680 CECR2Q9BXF3 1484 aa23.26■■□□□ 1.31
CMTM4-203ENST00000561680 BAZ1AQ9NRL2 1556 aaPredicted RBP23.23■■□□□ 1.31
CMTM4-203ENST00000561680 SMARCA4P51532 1647 aa23.22■■□□□ 1.31
CMTM4-203ENST00000561680 EIF4G1Q04637 1599 aaKnown RBP23.2■■□□□ 1.3
CMTM4-203ENST00000561680 MROH2BQ7Z745 1585 aa23.11■■□□□ 1.29
CMTM4-203ENST00000561680 RSF1Q96T23 1441 aaPredicted RBP22.99■■□□□ 1.27
CMTM4-203ENST00000561680 CC2D2AQ9P2K1 1620 aa22.99■■□□□ 1.27
CMTM4-203ENST00000561680 PEG3Q9GZU2 1588 aa22.98■■□□□ 1.27
CMTM4-203ENST00000561680 WIZO95785 1651 aa22.97■■□□□ 1.27
CMTM4-203ENST00000561680 SMARCA2P51531 1590 aa22.91■■□□□ 1.26
CMTM4-203ENST00000561680 ATAD2BQ9ULI0 1458 aa22.85■■□□□ 1.25
CMTM4-203ENST00000561680 HMGXB3Q12766 1538 aa22.78■■□□□ 1.24
CMTM4-203ENST00000561680 NCAPD3P42695 1498 aa22.75■■□□□ 1.23
CMTM4-203ENST00000561680 BAZ1BQ9UIG0 1483 aaKnown RBP22.72■■□□□ 1.23
CMTM4-203ENST00000561680 TOP2AP11388 1531 aaKnown RBP22.72■■□□□ 1.23
CMTM4-203ENST00000561680 SUPT5HO00267 1087 aaKnown RBP22.71■■□□□ 1.23
CMTM4-203ENST00000561680 DNAJC5BQ9UF47 199 aa22.63■■□□□ 1.21
CMTM4-203ENST00000561680 CCDC88BA6NC98 1476 aa22.38■■□□□ 1.17
CMTM4-203ENST00000561680 PRDM2Q13029 1718 aa22.28■■□□□ 1.16
CMTM4-203ENST00000561680 LAMC3Q9Y6N6 1575 aa22.15■■□□□ 1.14
CMTM4-203ENST00000561680 CFTRP13569 1480 aa22.11■■□□□ 1.13
CMTM4-203ENST00000561680 CADPSQ9ULU8 1353 aa22.08■■□□□ 1.12
CMTM4-203ENST00000561680 NESP48681 1621 aa22.06■■□□□ 1.12
CMTM4-203ENST00000561680 KIF21AQ7Z4S6 1674 aa21.98■■□□□ 1.11
CMTM4-203ENST00000561680 FANCD2Q9BXW9 1451 aa21.88■■□□□ 1.09
CMTM4-203ENST00000561680 PDS5BQ9NTI5 1447 aa21.88■■□□□ 1.09
CMTM4-203ENST00000561680 CEP164Q9UPV0 1460 aa21.82■■□□□ 1.08
CMTM4-203ENST00000561680 ABCC8Q09428 1581 aa21.78■■□□□ 1.08
CMTM4-203ENST00000561680 ERCC6Q03468 1493 aa21.74■■□□□ 1.07
CMTM4-203ENST00000561680 THOC2Q8NI27 1593 aaKnown RBP21.73■■□□□ 1.07
CMTM4-203ENST00000561680 BIVM-ERCC5R4GMW8 1640 aa21.71■■□□□ 1.07
CMTM4-203ENST00000561680 SYNJ1O43426 1573 aa21.69■■□□□ 1.06
CMTM4-203ENST00000561680 DNMBPQ6XZF7 1577 aa21.68■■□□□ 1.06
CMTM4-203ENST00000561680 CUX1P39880 1505 aa21.67■■□□□ 1.06
CMTM4-203ENST00000561680 MRC2Q9UBG0 1479 aa21.67■■□□□ 1.06
CMTM4-203ENST00000561680 WRNQ14191 1432 aaPredicted RBP eCLIP21.67■■□□□ 1.06
CMTM4-203ENST00000561680 TOP2BQ02880 1626 aa21.66■■□□□ 1.06
CMTM4-203ENST00000561680 URB2Q14146 1524 aaKnown RBP21.65■■□□□ 1.06
CMTM4-203ENST00000561680 WDR62O43379 1518 aa21.63■■□□□ 1.05
CMTM4-203ENST00000561680 TOPBP1Q92547 1522 aa21.61■■□□□ 1.05
CMTM4-203ENST00000561680 CHIC1Q5VXU3 224 aa21.55■■□□□ 1.04
CMTM4-203ENST00000561680 FGD5Q6ZNL6 1462 aa21.49■■□□□ 1.03
CMTM4-203ENST00000561680 POLA1P09884 1462 aaPredicted RBP21.45■■□□□ 1.03
CMTM4-203ENST00000561680 WDR97A6NE52 1622 aa21.45■■□□□ 1.02
CMTM4-203ENST00000561680 TRIM41Q8WV44 630 aa21.42■■□□□ 1.02
CMTM4-203ENST00000561680 TARBP1Q13395 1621 aaKnown RBP21.4■■□□□ 1.02
CMTM4-203ENST00000561680 CUX2O14529 1486 aa21.39■■□□□ 1.01
CMTM4-203ENST00000561680 RAD54L2Q9Y4B4 1467 aa21.32■■□□□ 1
CMTM4-203ENST00000561680 IFT140Q96RY7 1462 aa21.32■■□□□ 1
CMTM4-203ENST00000561680 ABCA10Q8WWZ4 1543 aa21.31■■□□□ 1
CMTM4-203ENST00000561680 SOGA1O94964 1423 aa21.3■■□□□ 1
CMTM4-203ENST00000561680 ABCA5Q8WWZ7 1642 aa21.26■□□□□ 0.99
CMTM4-203ENST00000561680 PBRM1Q86U86 1689 aa21.23■□□□□ 0.99
CMTM4-203ENST00000561680 EIF4G3O43432 1585 aaKnown RBP21.22■□□□□ 0.99
CMTM4-203ENST00000561680 ZNF608Q9ULD9 1512 aaPredicted RBP21.18■□□□□ 0.98
CMTM4-203ENST00000561680 KIF27Q86VH2 1401 aa21.16■□□□□ 0.98
CMTM4-203ENST00000561680 RUSC2Q8N2Y8 1516 aa21.15■□□□□ 0.98
CMTM4-203ENST00000561680 EEA1Q15075 1411 aa21.14■□□□□ 0.98
CMTM4-203ENST00000561680 GAPVD1Q14C86 1478 aa21.13■□□□□ 0.97
CMTM4-203ENST00000561680 TDRD9Q8NDG6 1382 aaKnown RBP21.1■□□□□ 0.97
CMTM4-203ENST00000561680 ERICH3Q5RHP9 1530 aa21.09■□□□□ 0.97
CMTM4-203ENST00000561680 AQRO60306 1485 aaKnown RBP eCLIP21.08■□□□□ 0.97
CMTM4-203ENST00000561680 CUL7Q14999 1698 aa21.07■□□□□ 0.96
CMTM4-203ENST00000561680 GRIN2BQ13224 1484 aa21.04■□□□□ 0.96
CMTM4-203ENST00000561680 ADAMTS12P58397 1594 aa21.01■□□□□ 0.95
CMTM4-203ENST00000561680 KIF21BO75037 1637 aa20.98■□□□□ 0.95
CMTM4-203ENST00000561680 IGF1RP08069 1367 aa20.97■□□□□ 0.95
CMTM4-203ENST00000561680 MAGI1Q96QZ7 1491 aaPredicted RBP20.96■□□□□ 0.95
CMTM4-203ENST00000561680 FAM9AQ8IZU1 332 aaPredicted RBP20.96■□□□□ 0.95
CMTM4-203ENST00000561680 SNAPC4Q5SXM2 1469 aa20.95■□□□□ 0.94
CMTM4-203ENST00000561680 CSRNP3Q8WYN3 585 aa20.93■□□□□ 0.94
CMTM4-203ENST00000561680 CHD1O14646 1710 aa20.92■□□□□ 0.94
CMTM4-203ENST00000561680 PRXQ9BXM0 1461 aa20.92■□□□□ 0.94
CMTM4-203ENST00000561680 FHAD1B1AJZ9 1412 aa20.88■□□□□ 0.93
CMTM4-203ENST00000561680 CARMIL1Q5VZK9 1371 aa20.87■□□□□ 0.93
CMTM4-203ENST00000561680 SYNJ2O15056 1496 aa20.85■□□□□ 0.93
CMTM4-203ENST00000561680 RAPGEF2Q9Y4G8 1499 aa20.85■□□□□ 0.93
CMTM4-203ENST00000561680 CTTNBP2Q8WZ74 1663 aa20.83■□□□□ 0.93
CMTM4-203ENST00000561680 GOLGA3Q08378 1498 aa20.81■□□□□ 0.92
CMTM4-203ENST00000561680 GRIN2AQ12879 1464 aa20.8■□□□□ 0.92
CMTM4-203ENST00000561680 CEP170Q5SW79 1584 aa20.72■□□□□ 0.91
CMTM4-203ENST00000561680 CHMP7Q8WUX9 453 aaPredicted RBP20.68■□□□□ 0.9
CMTM4-203ENST00000561680 NUP160Q12769 1436 aa20.68■□□□□ 0.9
CMTM4-203ENST00000561680 FBLN2P98095 1184 aa20.64■□□□□ 0.89
CMTM4-203ENST00000561680 IQGAP2Q13576 1575 aa20.63■□□□□ 0.89
CMTM4-203ENST00000561680 EHMT2Q96KQ7 1210 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms