RNA–Protein interactions for RNA: ENST00000561660.1

FANCA-206, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-206ENST00000561660 NISCHQ9Y2I1 1504 aa44.38■■■■■ 4.69
FANCA-206ENST00000561660 CCDC180Q9P1Z9 1646 aa39.47■■■■□ 3.91
FANCA-206ENST00000561660 ABCC9O60706 1549 aa39.08■■■■□ 3.85
FANCA-206ENST00000561660 RB1CC1Q8TDY2 1594 aa37.35■■■■□ 3.57
FANCA-206ENST00000561660 NACADO15069 1562 aa37.25■■■■□ 3.55
FANCA-206ENST00000561660 DCAF8L2P0C7V8 631 aa37.24■■■■□ 3.55
FANCA-206ENST00000561660 MYO15BQ96JP2 1530 aa36.94■■■■□ 3.5
FANCA-206ENST00000561660 ZCCHC6Q5VYS8 1495 aaKnown RBP36.89■■■■□ 3.5
FANCA-206ENST00000561660 DCAF1Q9Y4B6 1507 aa36.66■■■■□ 3.46
FANCA-206ENST00000561660 PABPN1Q86U42 306 aaKnown RBP eCLIP36.53■■■■□ 3.444e-8■■■■□ 23.7
FANCA-206ENST00000561660 UNC13AQ9UPW8 1703 aa36.49■■■■□ 3.43
FANCA-206ENST00000561660 BICRAQ9NZM4 1560 aa36.33■■■■□ 3.41
FANCA-206ENST00000561660 DNAJC5BQ9UF47 199 aa36.31■■■■□ 3.4
FANCA-206ENST00000561660 SCRIBQ14160 1630 aa36.08■■■■□ 3.37
FANCA-206ENST00000561660 SHROOM4Q9ULL8 1493 aa35.81■■■■□ 3.32
FANCA-206ENST00000561660 EIF4G1Q04637 1599 aaKnown RBP35.36■■■■□ 3.25
FANCA-206ENST00000561660 CC2D2AQ9P2K1 1620 aa35.29■■■■□ 3.24
FANCA-206ENST00000561660 CECR2Q9BXF3 1484 aa35.14■■■■□ 3.22
FANCA-206ENST00000561660 SMARCA4P51532 1647 aa34.47■■■■□ 3.11
FANCA-206ENST00000561660 NCAPD3P42695 1498 aa34.45■■■■□ 3.1
FANCA-206ENST00000561660 ATAD2BQ9ULI0 1458 aa34.42■■■■□ 3.1
FANCA-206ENST00000561660 BAZ1AQ9NRL2 1556 aaPredicted RBP34.36■■■■□ 3.09
FANCA-206ENST00000561660 SMARCA2P51531 1590 aa34.28■■■■□ 3.08
FANCA-206ENST00000561660 MROH2BQ7Z745 1585 aa34.23■■■■□ 3.07
FANCA-206ENST00000561660 HMGXB3Q12766 1538 aa34.18■■■■□ 3.06
FANCA-206ENST00000561660 PEG3Q9GZU2 1588 aa34.14■■■■□ 3.06
FANCA-206ENST00000561660 BAZ1BQ9UIG0 1483 aaKnown RBP34.07■■■■□ 3.04
FANCA-206ENST00000561660 WIZO95785 1651 aa33.8■■■■□ 3
FANCA-206ENST00000561660 NESP48681 1621 aa33.75■■■□□ 2.99
FANCA-206ENST00000561660 RSF1Q96T23 1441 aaPredicted RBP33.74■■■□□ 2.99
FANCA-206ENST00000561660 ERCC6Q03468 1493 aa33.64■■■□□ 2.98
FANCA-206ENST00000561660 LAMC3Q9Y6N6 1575 aa33.51■■■□□ 2.95
FANCA-206ENST00000561660 CADPSQ9ULU8 1353 aa33.43■■■□□ 2.94
FANCA-206ENST00000561660 CUX2O14529 1486 aa33.41■■■□□ 2.94
FANCA-206ENST00000561660 TOP2AP11388 1531 aaKnown RBP33.4■■■□□ 2.94
FANCA-206ENST00000561660 PDS5BQ9NTI5 1447 aa33.33■■■□□ 2.93
FANCA-206ENST00000561660 THOC2Q8NI27 1593 aaKnown RBP33.23■■■□□ 2.91
FANCA-206ENST00000561660 KIF21AQ7Z4S6 1674 aa33.23■■■□□ 2.91
FANCA-206ENST00000561660 CFTRP13569 1480 aa33.16■■■□□ 2.9
FANCA-206ENST00000561660 CCDC88BA6NC98 1476 aa33.07■■■□□ 2.88
FANCA-206ENST00000561660 FANCD2Q9BXW9 1451 aa33.02■■■□□ 2.88
FANCA-206ENST00000561660 MRC2Q9UBG0 1479 aa33.01■■■□□ 2.88
FANCA-206ENST00000561660 CEP164Q9UPV0 1460 aa32.98■■■□□ 2.87
FANCA-206ENST00000561660 WDR62O43379 1518 aa32.92■■■□□ 2.86
FANCA-206ENST00000561660 DNAJC5Q9H3Z4 198 aa32.87■■■□□ 2.85
FANCA-206ENST00000561660 URB2Q14146 1524 aaKnown RBP32.74■■■□□ 2.83
FANCA-206ENST00000561660 PRDM2Q13029 1718 aa32.7■■■□□ 2.83
FANCA-206ENST00000561660 SUPT5HO00267 1087 aaKnown RBP32.63■■■□□ 2.81
FANCA-206ENST00000561660 TOPBP1Q92547 1522 aa32.46■■■□□ 2.79
FANCA-206ENST00000561660 ABCC8Q09428 1581 aa32.36■■■□□ 2.77
FANCA-206ENST00000561660 DNMBPQ6XZF7 1577 aa32.36■■■□□ 2.77
FANCA-206ENST00000561660 IFT140Q96RY7 1462 aa32.31■■■□□ 2.76
FANCA-206ENST00000561660 ZNF608Q9ULD9 1512 aaPredicted RBP32.27■■■□□ 2.76
FANCA-206ENST00000561660 POLA1P09884 1462 aaPredicted RBP32.17■■■□□ 2.74
FANCA-206ENST00000561660 TARBP1Q13395 1621 aaKnown RBP32.12■■■□□ 2.73
FANCA-206ENST00000561660 CUX1P39880 1505 aa32.12■■■□□ 2.73
FANCA-206ENST00000561660 RAD54L2Q9Y4B4 1467 aa32.08■■■□□ 2.73
FANCA-206ENST00000561660 AQRO60306 1485 aaKnown RBP eCLIP32.04■■■□□ 2.722e-6■■■■■ 28.6
FANCA-206ENST00000561660 SOGA1O94964 1423 aa32.04■■■□□ 2.72
FANCA-206ENST00000561660 FGD5Q6ZNL6 1462 aa32.03■■■□□ 2.72
FANCA-206ENST00000561660 EIF4G3O43432 1585 aaKnown RBP32.03■■■□□ 2.72
FANCA-206ENST00000561660 OSCARQ8IYS5 282 aa32.02■■■□□ 2.72
FANCA-206ENST00000561660 TDRD9Q8NDG6 1382 aaKnown RBP31.94■■■□□ 2.7
FANCA-206ENST00000561660 WRNQ14191 1432 aaPredicted RBP eCLIP31.76■■■□□ 2.68
FANCA-206ENST00000561660 WDR97A6NE52 1622 aa31.75■■■□□ 2.67
FANCA-206ENST00000561660 SYNJ1O43426 1573 aa31.71■■■□□ 2.67
FANCA-206ENST00000561660 ABCA10Q8WWZ4 1543 aa31.7■■■□□ 2.67
FANCA-206ENST00000561660 TOP2BQ02880 1626 aa31.7■■■□□ 2.66
FANCA-206ENST00000561660 SNAPC4Q5SXM2 1469 aa31.7■■■□□ 2.66
FANCA-206ENST00000561660 FBLN2P98095 1184 aa31.69■■■□□ 2.66
FANCA-206ENST00000561660 BIVM-ERCC5R4GMW8 1640 aa31.67■■■□□ 2.66
FANCA-206ENST00000561660 GRIN2BQ13224 1484 aa31.67■■■□□ 2.66
FANCA-206ENST00000561660 CHD1O14646 1710 aa31.66■■■□□ 2.66
FANCA-206ENST00000561660 GAPVD1Q14C86 1478 aa31.65■■■□□ 2.66
FANCA-206ENST00000561660 TRIM41Q8WV44 630 aa31.62■■■□□ 2.65
FANCA-206ENST00000561660 MAGI1Q96QZ7 1491 aaPredicted RBP31.6■■■□□ 2.65
FANCA-206ENST00000561660 ABCA5Q8WWZ7 1642 aa31.58■■■□□ 2.65
FANCA-206ENST00000561660 CHMP7Q8WUX9 453 aaPredicted RBP31.54■■■□□ 2.64
FANCA-206ENST00000561660 SYNJ2O15056 1496 aa31.51■■■□□ 2.63
FANCA-206ENST00000561660 PBRM1Q86U86 1689 aa31.51■■■□□ 2.63
FANCA-206ENST00000561660 RIMBP3CA6NJZ7 1639 aa31.5■■■□□ 2.63
FANCA-206ENST00000561660 RIMBP3BA6NNM3 1639 aa31.5■■■□□ 2.63
FANCA-206ENST00000561660 RIMBP3Q9UFD9 1639 aa31.5■■■□□ 2.63
FANCA-206ENST00000561660 ARHGEF11O15085 1522 aa31.49■■■□□ 2.63
FANCA-206ENST00000561660 CLASP1Q7Z460 1538 aa31.38■■■□□ 2.61
FANCA-206ENST00000561660 ADAMTS12P58397 1594 aa31.3■■■□□ 2.6
FANCA-206ENST00000561660 ERICH3Q5RHP9 1530 aa31.29■■■□□ 2.6
FANCA-206ENST00000561660 GRIN2AQ12879 1464 aa31.27■■■□□ 2.6
FANCA-206ENST00000561660 FHAD1B1AJZ9 1412 aa31.26■■■□□ 2.6
FANCA-206ENST00000561660 CYB5RLQ6IPT4 315 aa31.26■■■□□ 2.59
FANCA-206ENST00000561660 ARAP1Q96P48 1450 aa31.24■■■□□ 2.59
FANCA-206ENST00000561660 NUP160Q12769 1436 aa31.17■■■□□ 2.58
FANCA-206ENST00000561660 CEP170Q5SW79 1584 aa31.13■■■□□ 2.57
FANCA-206ENST00000561660 IGF1RP08069 1367 aa31.11■■■□□ 2.57
FANCA-206ENST00000561660 KIF27Q86VH2 1401 aa31.11■■■□□ 2.57
FANCA-206ENST00000561660 ERCC6L2Q5T890 1561 aa30.98■■■□□ 2.55
FANCA-206ENST00000561660 SHROOM2Q13796 1616 aa30.92■■■□□ 2.54
FANCA-206ENST00000561660 CUL7Q14999 1698 aa30.88■■■□□ 2.53
FANCA-206ENST00000561660 JPH4Q96JJ6 628 aa30.88■■■□□ 2.53
FANCA-206ENST00000561660 CARMIL1Q5VZK9 1371 aa30.88■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms