RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 NISCHQ9Y2I1 1504 aa38.08■■■■□ 3.69
CCDC113-203ENST00000561517 CCDC180Q9P1Z9 1646 aa33.99■■■■□ 3.03
CCDC113-203ENST00000561517 ABCC9O60706 1549 aa33.38■■■□□ 2.93
CCDC113-203ENST00000561517 RB1CC1Q8TDY2 1594 aa32.06■■■□□ 2.72
CCDC113-203ENST00000561517 NACADO15069 1562 aa31.98■■■□□ 2.71
CCDC113-203ENST00000561517 DCAF8L2P0C7V8 631 aa31.81■■■□□ 2.68
CCDC113-203ENST00000561517 MYO15BQ96JP2 1530 aa31.75■■■□□ 2.67
CCDC113-203ENST00000561517 ZCCHC6Q5VYS8 1495 aaKnown RBP31.68■■■□□ 2.66
CCDC113-203ENST00000561517 DCAF1Q9Y4B6 1507 aa31.53■■■□□ 2.64
CCDC113-203ENST00000561517 UNC13AQ9UPW8 1703 aa31.41■■■□□ 2.62
CCDC113-203ENST00000561517 PABPN1Q86U42 306 aaKnown RBP eCLIP31.14■■■□□ 2.58
CCDC113-203ENST00000561517 BICRAQ9NZM4 1560 aa31.13■■■□□ 2.57
CCDC113-203ENST00000561517 SCRIBQ14160 1630 aa30.93■■■□□ 2.54
CCDC113-203ENST00000561517 DNAJC5BQ9UF47 199 aa30.86■■■□□ 2.53
CCDC113-203ENST00000561517 SHROOM4Q9ULL8 1493 aa30.77■■■□□ 2.52
CCDC113-203ENST00000561517 EIF4G1Q04637 1599 aaKnown RBP30.29■■■□□ 2.44
CCDC113-203ENST00000561517 CC2D2AQ9P2K1 1620 aa30.23■■■□□ 2.43
CCDC113-203ENST00000561517 CECR2Q9BXF3 1484 aa30.03■■■□□ 2.4
CCDC113-203ENST00000561517 SMARCA4P51532 1647 aa29.6■■■□□ 2.33
CCDC113-203ENST00000561517 BAZ1AQ9NRL2 1556 aaPredicted RBP29.53■■■□□ 2.32
CCDC113-203ENST00000561517 NCAPD3P42695 1498 aa29.51■■■□□ 2.31
CCDC113-203ENST00000561517 ATAD2BQ9ULI0 1458 aa29.48■■■□□ 2.31
CCDC113-203ENST00000561517 SMARCA2P51531 1590 aa29.44■■■□□ 2.3
CCDC113-203ENST00000561517 HMGXB3Q12766 1538 aa29.35■■■□□ 2.29
CCDC113-203ENST00000561517 PEG3Q9GZU2 1588 aa29.35■■■□□ 2.29
CCDC113-203ENST00000561517 MROH2BQ7Z745 1585 aa29.34■■■□□ 2.29
CCDC113-203ENST00000561517 BAZ1BQ9UIG0 1483 aaKnown RBP29.21■■■□□ 2.27
CCDC113-203ENST00000561517 WIZO95785 1651 aa29.02■■■□□ 2.24
CCDC113-203ENST00000561517 RSF1Q96T23 1441 aaPredicted RBP28.92■■■□□ 2.22
CCDC113-203ENST00000561517 NESP48681 1621 aa28.84■■■□□ 2.21
CCDC113-203ENST00000561517 ERCC6Q03468 1493 aa28.78■■■□□ 2.2
CCDC113-203ENST00000561517 LAMC3Q9Y6N6 1575 aa28.77■■■□□ 2.2
CCDC113-203ENST00000561517 TOP2AP11388 1531 aaKnown RBP28.69■■■□□ 2.18
CCDC113-203ENST00000561517 CADPSQ9ULU8 1353 aa28.62■■■□□ 2.17
CCDC113-203ENST00000561517 CUX2O14529 1486 aa28.6■■■□□ 2.17
CCDC113-203ENST00000561517 PDS5BQ9NTI5 1447 aa28.55■■■□□ 2.16
CCDC113-203ENST00000561517 KIF21AQ7Z4S6 1674 aa28.54■■■□□ 2.16
CCDC113-203ENST00000561517 THOC2Q8NI27 1593 aaKnown RBP28.49■■■□□ 2.15
CCDC113-203ENST00000561517 CFTRP13569 1480 aa28.42■■■□□ 2.14
CCDC113-203ENST00000561517 CCDC88BA6NC98 1476 aa28.34■■■□□ 2.13
CCDC113-203ENST00000561517 FANCD2Q9BXW9 1451 aa28.28■■■□□ 2.12
CCDC113-203ENST00000561517 MRC2Q9UBG0 1479 aa28.28■■■□□ 2.12
CCDC113-203ENST00000561517 CEP164Q9UPV0 1460 aa28.27■■■□□ 2.12
CCDC113-203ENST00000561517 PRDM2Q13029 1718 aa28.26■■■□□ 2.11
CCDC113-203ENST00000561517 WDR62O43379 1518 aa28.21■■■□□ 2.11
CCDC113-203ENST00000561517 URB2Q14146 1524 aaKnown RBP28.03■■■□□ 2.08
CCDC113-203ENST00000561517 SUPT5HO00267 1087 aaKnown RBP27.96■■■□□ 2.07
CCDC113-203ENST00000561517 DNAJC5Q9H3Z4 198 aa27.96■■■□□ 2.07
CCDC113-203ENST00000561517 TOPBP1Q92547 1522 aa27.82■■■□□ 2.04
CCDC113-203ENST00000561517 ABCC8Q09428 1581 aa27.82■■■□□ 2.04
CCDC113-203ENST00000561517 DNMBPQ6XZF7 1577 aa27.77■■■□□ 2.04
CCDC113-203ENST00000561517 IFT140Q96RY7 1462 aa27.7■■■□□ 2.02
CCDC113-203ENST00000561517 ZNF608Q9ULD9 1512 aaPredicted RBP27.58■■■□□ 2.01
CCDC113-203ENST00000561517 POLA1P09884 1462 aaPredicted RBP27.57■■■□□ 2
CCDC113-203ENST00000561517 TARBP1Q13395 1621 aaKnown RBP27.56■■■□□ 2
CCDC113-203ENST00000561517 CUX1P39880 1505 aa27.53■■■□□ 2
CCDC113-203ENST00000561517 EIF4G3O43432 1585 aaKnown RBP27.48■■□□□ 1.99
CCDC113-203ENST00000561517 FGD5Q6ZNL6 1462 aa27.46■■□□□ 1.99
CCDC113-203ENST00000561517 RAD54L2Q9Y4B4 1467 aa27.44■■□□□ 1.98
CCDC113-203ENST00000561517 SOGA1O94964 1423 aa27.43■■□□□ 1.98
CCDC113-203ENST00000561517 AQRO60306 1485 aaKnown RBP eCLIP27.39■■□□□ 1.98
CCDC113-203ENST00000561517 OSCARQ8IYS5 282 aa27.35■■□□□ 1.97
CCDC113-203ENST00000561517 WDR97A6NE52 1622 aa27.34■■□□□ 1.97
CCDC113-203ENST00000561517 TDRD9Q8NDG6 1382 aaKnown RBP27.3■■□□□ 1.96
CCDC113-203ENST00000561517 BIVM-ERCC5R4GMW8 1640 aa27.27■■□□□ 1.96
CCDC113-203ENST00000561517 WRNQ14191 1432 aaPredicted RBP eCLIP27.26■■□□□ 1.95
CCDC113-203ENST00000561517 TOP2BQ02880 1626 aa27.26■■□□□ 1.95
CCDC113-203ENST00000561517 SYNJ1O43426 1573 aa27.22■■□□□ 1.95
CCDC113-203ENST00000561517 ABCA10Q8WWZ4 1543 aa27.21■■□□□ 1.95
CCDC113-203ENST00000561517 CHD1O14646 1710 aa27.2■■□□□ 1.94
CCDC113-203ENST00000561517 GRIN2BQ13224 1484 aa27.15■■□□□ 1.94
CCDC113-203ENST00000561517 SNAPC4Q5SXM2 1469 aa27.13■■□□□ 1.93
CCDC113-203ENST00000561517 GAPVD1Q14C86 1478 aa27.13■■□□□ 1.93
CCDC113-203ENST00000561517 ABCA5Q8WWZ7 1642 aa27.12■■□□□ 1.93
CCDC113-203ENST00000561517 MAGI1Q96QZ7 1491 aaPredicted RBP27.12■■□□□ 1.93
CCDC113-203ENST00000561517 PBRM1Q86U86 1689 aa27.11■■□□□ 1.93
CCDC113-203ENST00000561517 FBLN2P98095 1184 aa27.05■■□□□ 1.92
CCDC113-203ENST00000561517 SYNJ2O15056 1496 aa27■■□□□ 1.91
CCDC113-203ENST00000561517 CHMP7Q8WUX9 453 aaPredicted RBP26.98■■□□□ 1.91
CCDC113-203ENST00000561517 RIMBP3CA6NJZ7 1639 aa26.97■■□□□ 1.91
CCDC113-203ENST00000561517 RIMBP3BA6NNM3 1639 aa26.97■■□□□ 1.91
CCDC113-203ENST00000561517 RIMBP3Q9UFD9 1639 aa26.97■■□□□ 1.91
CCDC113-203ENST00000561517 ARHGEF11O15085 1522 aa26.92■■□□□ 1.9
CCDC113-203ENST00000561517 CLASP1Q7Z460 1538 aa26.89■■□□□ 1.89
CCDC113-203ENST00000561517 TRIM41Q8WV44 630 aa26.88■■□□□ 1.89
CCDC113-203ENST00000561517 ERICH3Q5RHP9 1530 aa26.88■■□□□ 1.89
CCDC113-203ENST00000561517 ADAMTS12P58397 1594 aa26.87■■□□□ 1.89
CCDC113-203ENST00000561517 FHAD1B1AJZ9 1412 aa26.81■■□□□ 1.88
CCDC113-203ENST00000561517 GRIN2AQ12879 1464 aa26.81■■□□□ 1.88
CCDC113-203ENST00000561517 NUP160Q12769 1436 aa26.72■■□□□ 1.87
CCDC113-203ENST00000561517 KIF27Q86VH2 1401 aa26.71■■□□□ 1.87
CCDC113-203ENST00000561517 ARAP1Q96P48 1450 aa26.69■■□□□ 1.86
CCDC113-203ENST00000561517 CEP170Q5SW79 1584 aa26.69■■□□□ 1.86
CCDC113-203ENST00000561517 CYB5RLQ6IPT4 315 aa26.65■■□□□ 1.86
CCDC113-203ENST00000561517 IGF1RP08069 1367 aa26.64■■□□□ 1.86
CCDC113-203ENST00000561517 CUL7Q14999 1698 aa26.6■■□□□ 1.85
CCDC113-203ENST00000561517 SHROOM2Q13796 1616 aa26.56■■□□□ 1.84
CCDC113-203ENST00000561517 ERCC6L2Q5T890 1561 aa26.49■■□□□ 1.83
CCDC113-203ENST00000561517 RUSC2Q8N2Y8 1516 aa26.48■■□□□ 1.83
CCDC113-203ENST00000561517 CARMIL1Q5VZK9 1371 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms