RNA–Protein interactions for RNA: ENST00000561476.1

LINC01613-201, Transcript of long intergenic non-protein coding RNA 1613, humanhuman

BASIC

Gene LINC01613, Length 2,780 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01613-201ENST00000561476 NISCHQ9Y2I1 1504 aa16.26■□□□□ 0.19
LINC01613-201ENST00000561476 CCDC180Q9P1Z9 1646 aa14.64□□□□□ -0.07
LINC01613-201ENST00000561476 ABCC9O60706 1549 aa14.45□□□□□ -0.1
LINC01613-201ENST00000561476 RB1CC1Q8TDY2 1594 aa13.87□□□□□ -0.19
LINC01613-201ENST00000561476 NACADO15069 1562 aa13.81□□□□□ -0.2
LINC01613-201ENST00000561476 MYO15BQ96JP2 1530 aa13.69□□□□□ -0.22
LINC01613-201ENST00000561476 UNC13AQ9UPW8 1703 aa13.57□□□□□ -0.24
LINC01613-201ENST00000561476 DCAF1Q9Y4B6 1507 aa13.52□□□□□ -0.25
LINC01613-201ENST00000561476 DCAF8L2P0C7V8 631 aa13.52□□□□□ -0.25
LINC01613-201ENST00000561476 DNAJC5BQ9UF47 199 aa13.5□□□□□ -0.25
LINC01613-201ENST00000561476 ZCCHC6Q5VYS8 1495 aaKnown RBP13.5□□□□□ -0.25
LINC01613-201ENST00000561476 BICRAQ9NZM4 1560 aa13.46□□□□□ -0.25
LINC01613-201ENST00000561476 PABPN1Q86U42 306 aaKnown RBP eCLIP13.41□□□□□ -0.26
LINC01613-201ENST00000561476 SHROOM4Q9ULL8 1493 aa13.37□□□□□ -0.27
LINC01613-201ENST00000561476 SCRIBQ14160 1630 aa13.22□□□□□ -0.29
LINC01613-201ENST00000561476 CC2D2AQ9P2K1 1620 aa13.12□□□□□ -0.31
LINC01613-201ENST00000561476 EIF4G1Q04637 1599 aaKnown RBP13.11□□□□□ -0.31
LINC01613-201ENST00000561476 CECR2Q9BXF3 1484 aa13.05□□□□□ -0.32
LINC01613-201ENST00000561476 NCAPD3P42695 1498 aa12.73□□□□□ -0.37
LINC01613-201ENST00000561476 SMARCA4P51532 1647 aa12.68□□□□□ -0.38
LINC01613-201ENST00000561476 ATAD2BQ9ULI0 1458 aa12.67□□□□□ -0.38
LINC01613-201ENST00000561476 HMGXB3Q12766 1538 aa12.66□□□□□ -0.38
LINC01613-201ENST00000561476 SMARCA2P51531 1590 aa12.66□□□□□ -0.38
LINC01613-201ENST00000561476 BAZ1AQ9NRL2 1556 aaPredicted RBP12.63□□□□□ -0.39
LINC01613-201ENST00000561476 PEG3Q9GZU2 1588 aa12.62□□□□□ -0.39
LINC01613-201ENST00000561476 CUX2O14529 1486 aa12.54□□□□□ -0.4
LINC01613-201ENST00000561476 BAZ1BQ9UIG0 1483 aaKnown RBP12.53□□□□□ -0.4
LINC01613-201ENST00000561476 MROH2BQ7Z745 1585 aa12.5□□□□□ -0.41
LINC01613-201ENST00000561476 ERCC6Q03468 1493 aa12.48□□□□□ -0.41
LINC01613-201ENST00000561476 LAMC3Q9Y6N6 1575 aa12.45□□□□□ -0.42
LINC01613-201ENST00000561476 NESP48681 1621 aa12.43□□□□□ -0.42
LINC01613-201ENST00000561476 DNAJC5Q9H3Z4 198 aa12.42□□□□□ -0.42
LINC01613-201ENST00000561476 THOC2Q8NI27 1593 aaKnown RBP12.37□□□□□ -0.43
LINC01613-201ENST00000561476 WIZO95785 1651 aa12.35□□□□□ -0.43
LINC01613-201ENST00000561476 PDS5BQ9NTI5 1447 aa12.33□□□□□ -0.44
LINC01613-201ENST00000561476 KIF21AQ7Z4S6 1674 aa12.32□□□□□ -0.44
LINC01613-201ENST00000561476 CADPSQ9ULU8 1353 aa12.31□□□□□ -0.44
LINC01613-201ENST00000561476 RSF1Q96T23 1441 aaPredicted RBP12.26□□□□□ -0.45
LINC01613-201ENST00000561476 TOP2AP11388 1531 aaKnown RBP12.23□□□□□ -0.45
LINC01613-201ENST00000561476 MRC2Q9UBG0 1479 aa12.23□□□□□ -0.45
LINC01613-201ENST00000561476 WDR62O43379 1518 aa12.22□□□□□ -0.45
LINC01613-201ENST00000561476 CFTRP13569 1480 aa12.2□□□□□ -0.46
LINC01613-201ENST00000561476 CEP164Q9UPV0 1460 aa12.17□□□□□ -0.46
LINC01613-201ENST00000561476 FANCD2Q9BXW9 1451 aa12.16□□□□□ -0.46
LINC01613-201ENST00000561476 PRDM2Q13029 1718 aa12.14□□□□□ -0.47
LINC01613-201ENST00000561476 URB2Q14146 1524 aaKnown RBP12.06□□□□□ -0.48
LINC01613-201ENST00000561476 CCDC88BA6NC98 1476 aa12.06□□□□□ -0.48
LINC01613-201ENST00000561476 ABCC8Q09428 1581 aa11.97□□□□□ -0.49
LINC01613-201ENST00000561476 IFT140Q96RY7 1462 aa11.95□□□□□ -0.5
LINC01613-201ENST00000561476 TOPBP1Q92547 1522 aa11.94□□□□□ -0.5
LINC01613-201ENST00000561476 DNMBPQ6XZF7 1577 aa11.93□□□□□ -0.5
LINC01613-201ENST00000561476 OSCARQ8IYS5 282 aa11.9□□□□□ -0.51
LINC01613-201ENST00000561476 ZNF608Q9ULD9 1512 aaPredicted RBP11.87□□□□□ -0.51
LINC01613-201ENST00000561476 TARBP1Q13395 1621 aaKnown RBP11.87□□□□□ -0.51
LINC01613-201ENST00000561476 EIF4G3O43432 1585 aaKnown RBP11.85□□□□□ -0.51
LINC01613-201ENST00000561476 WDR97A6NE52 1622 aa11.82□□□□□ -0.52
LINC01613-201ENST00000561476 POLA1P09884 1462 aaPredicted RBP11.82□□□□□ -0.52
LINC01613-201ENST00000561476 TRIM41Q8WV44 630 aa11.78□□□□□ -0.52
LINC01613-201ENST00000561476 RIMBP3CA6NJZ7 1639 aa11.77□□□□□ -0.53
LINC01613-201ENST00000561476 RIMBP3BA6NNM3 1639 aa11.77□□□□□ -0.53
LINC01613-201ENST00000561476 RIMBP3Q9UFD9 1639 aa11.77□□□□□ -0.53
LINC01613-201ENST00000561476 AQRO60306 1485 aaKnown RBP eCLIP11.76□□□□□ -0.53
LINC01613-201ENST00000561476 CHD1O14646 1710 aa11.76□□□□□ -0.53
LINC01613-201ENST00000561476 SOGA1O94964 1423 aa11.75□□□□□ -0.53
LINC01613-201ENST00000561476 CUX1P39880 1505 aa11.75□□□□□ -0.53
LINC01613-201ENST00000561476 FGD5Q6ZNL6 1462 aa11.74□□□□□ -0.53
LINC01613-201ENST00000561476 RAD54L2Q9Y4B4 1467 aa11.73□□□□□ -0.53
LINC01613-201ENST00000561476 ARHGEF11O15085 1522 aa11.73□□□□□ -0.53
LINC01613-201ENST00000561476 MAGI1Q96QZ7 1491 aaPredicted RBP11.68□□□□□ -0.54
LINC01613-201ENST00000561476 TDRD9Q8NDG6 1382 aaKnown RBP11.68□□□□□ -0.54
LINC01613-201ENST00000561476 GRIN2BQ13224 1484 aa11.67□□□□□ -0.54
LINC01613-201ENST00000561476 SNAPC4Q5SXM2 1469 aa11.66□□□□□ -0.54
LINC01613-201ENST00000561476 CLASP1Q7Z460 1538 aa11.65□□□□□ -0.54
LINC01613-201ENST00000561476 ABCA10Q8WWZ4 1543 aa11.65□□□□□ -0.54
LINC01613-201ENST00000561476 PBRM1Q86U86 1689 aa11.65□□□□□ -0.55
LINC01613-201ENST00000561476 ABCA5Q8WWZ7 1642 aa11.64□□□□□ -0.55
LINC01613-201ENST00000561476 SYNJ2O15056 1496 aa11.63□□□□□ -0.55
LINC01613-201ENST00000561476 SYNJ1O43426 1573 aa11.63□□□□□ -0.55
LINC01613-201ENST00000561476 BIVM-ERCC5R4GMW8 1640 aa11.62□□□□□ -0.55
LINC01613-201ENST00000561476 GAPVD1Q14C86 1478 aa11.62□□□□□ -0.55
LINC01613-201ENST00000561476 ARAP1Q96P48 1450 aa11.61□□□□□ -0.55
LINC01613-201ENST00000561476 SUPT5HO00267 1087 aaKnown RBP11.61□□□□□ -0.55
LINC01613-201ENST00000561476 TOP2BQ02880 1626 aa11.6□□□□□ -0.55
LINC01613-201ENST00000561476 FBLN2P98095 1184 aa11.6□□□□□ -0.55
LINC01613-201ENST00000561476 WRNQ14191 1432 aaPredicted RBP eCLIP11.58□□□□□ -0.56
LINC01613-201ENST00000561476 CHMP7Q8WUX9 453 aaPredicted RBP11.58□□□□□ -0.56
LINC01613-201ENST00000561476 CYB5RLQ6IPT4 315 aa11.56□□□□□ -0.56
LINC01613-201ENST00000561476 ADAMTS12P58397 1594 aa11.53□□□□□ -0.56
LINC01613-201ENST00000561476 ERICH3Q5RHP9 1530 aa11.52□□□□□ -0.57
LINC01613-201ENST00000561476 GRIN2AQ12879 1464 aa11.51□□□□□ -0.57
LINC01613-201ENST00000561476 NUP160Q12769 1436 aa11.5□□□□□ -0.57
LINC01613-201ENST00000561476 FHAD1B1AJZ9 1412 aa11.49□□□□□ -0.57
LINC01613-201ENST00000561476 SHROOM2Q13796 1616 aa11.47□□□□□ -0.57
LINC01613-201ENST00000561476 CEP170Q5SW79 1584 aa11.47□□□□□ -0.57
LINC01613-201ENST00000561476 ERCC6L2Q5T890 1561 aa11.4□□□□□ -0.58
LINC01613-201ENST00000561476 TRHP20396 242 aaPredicted RBP11.39□□□□□ -0.59
LINC01613-201ENST00000561476 RUSC2Q8N2Y8 1516 aa11.37□□□□□ -0.59
LINC01613-201ENST00000561476 CUL7Q14999 1698 aa11.36□□□□□ -0.59
LINC01613-201ENST00000561476 KIF27Q86VH2 1401 aa11.34□□□□□ -0.59
LINC01613-201ENST00000561476 PRG4Q92954 1404 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms