RNA–Protein interactions for RNA: ENST00000561412.1

IRF9-214, Transcript of interferon regulatory factor 9, humanhuman

TSL 5

Gene IRF9, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-214ENST00000561412 NISCHQ9Y2I1 1504 aa25.88■■□□□ 1.73
IRF9-214ENST00000561412 ABCC9O60706 1549 aa23.87■■□□□ 1.41
IRF9-214ENST00000561412 CCDC180Q9P1Z9 1646 aa23.3■■□□□ 1.32
IRF9-214ENST00000561412 DNAJC5BQ9UF47 199 aa22.88■■□□□ 1.25
IRF9-214ENST00000561412 RB1CC1Q8TDY2 1594 aa22.39■■□□□ 1.18
IRF9-214ENST00000561412 PABPN1Q86U42 306 aaKnown RBP eCLIP22.21■■□□□ 1.15
IRF9-214ENST00000561412 NACADO15069 1562 aa22.13■■□□□ 1.13
IRF9-214ENST00000561412 DCAF8L2P0C7V8 631 aa22.06■■□□□ 1.12
IRF9-214ENST00000561412 UNC13AQ9UPW8 1703 aa22.03■■□□□ 1.12
IRF9-214ENST00000561412 BICRAQ9NZM4 1560 aa21.91■■□□□ 1.1
IRF9-214ENST00000561412 MYO15BQ96JP2 1530 aa21.65■■□□□ 1.06
IRF9-214ENST00000561412 CC2D2AQ9P2K1 1620 aa21.51■■□□□ 1.03
IRF9-214ENST00000561412 CECR2Q9BXF3 1484 aa21.49■■□□□ 1.03
IRF9-214ENST00000561412 ZCCHC6Q5VYS8 1495 aaKnown RBP21.37■■□□□ 1.01
IRF9-214ENST00000561412 SCRIBQ14160 1630 aa21.36■■□□□ 1.01
IRF9-214ENST00000561412 EIF4G1Q04637 1599 aaKnown RBP21.35■■□□□ 1.01
IRF9-214ENST00000561412 SHROOM4Q9ULL8 1493 aa21.32■■□□□ 1
IRF9-214ENST00000561412 DCAF1Q9Y4B6 1507 aa21.25■□□□□ 0.99
IRF9-214ENST00000561412 DNAJC5Q9H3Z4 198 aa21.13■□□□□ 0.97
IRF9-214ENST00000561412 CUX2O14529 1486 aa20.6■□□□□ 0.89
IRF9-214ENST00000561412 ERCC6Q03468 1493 aa20.54■□□□□ 0.88
IRF9-214ENST00000561412 NCAPD3P42695 1498 aa20.49■□□□□ 0.87
IRF9-214ENST00000561412 NESP48681 1621 aa20.45■□□□□ 0.86
IRF9-214ENST00000561412 ATAD2BQ9ULI0 1458 aa20.42■□□□□ 0.86
IRF9-214ENST00000561412 SMARCA4P51532 1647 aa20.28■□□□□ 0.84
IRF9-214ENST00000561412 HMGXB3Q12766 1538 aa20.27■□□□□ 0.83
IRF9-214ENST00000561412 SMARCA2P51531 1590 aa20.24■□□□□ 0.83
IRF9-214ENST00000561412 THOC2Q8NI27 1593 aaKnown RBP20.24■□□□□ 0.83
IRF9-214ENST00000561412 BAZ1BQ9UIG0 1483 aaKnown RBP20.15■□□□□ 0.82
IRF9-214ENST00000561412 KIF21AQ7Z4S6 1674 aa20.1■□□□□ 0.81
IRF9-214ENST00000561412 TRIM41Q8WV44 630 aa20.1■□□□□ 0.81
IRF9-214ENST00000561412 BAZ1AQ9NRL2 1556 aaPredicted RBP20.05■□□□□ 0.8
IRF9-214ENST00000561412 LAMC3Q9Y6N6 1575 aa20.04■□□□□ 0.8
IRF9-214ENST00000561412 PEG3Q9GZU2 1588 aa20.04■□□□□ 0.8
IRF9-214ENST00000561412 MROH2BQ7Z745 1585 aa20.02■□□□□ 0.8
IRF9-214ENST00000561412 PDS5BQ9NTI5 1447 aa19.93■□□□□ 0.78
IRF9-214ENST00000561412 CADPSQ9ULU8 1353 aa19.85■□□□□ 0.77
IRF9-214ENST00000561412 MRC2Q9UBG0 1479 aa19.85■□□□□ 0.77
IRF9-214ENST00000561412 WDR62O43379 1518 aa19.82■□□□□ 0.76
IRF9-214ENST00000561412 WIZO95785 1651 aa19.75■□□□□ 0.75
IRF9-214ENST00000561412 CEP164Q9UPV0 1460 aa19.67■□□□□ 0.74
IRF9-214ENST00000561412 FANCD2Q9BXW9 1451 aa19.65■□□□□ 0.74
IRF9-214ENST00000561412 OSCARQ8IYS5 282 aa19.61■□□□□ 0.73
IRF9-214ENST00000561412 URB2Q14146 1524 aaKnown RBP19.58■□□□□ 0.73
IRF9-214ENST00000561412 CFTRP13569 1480 aa19.55■□□□□ 0.72
IRF9-214ENST00000561412 RIMBP3CA6NJZ7 1639 aa19.49■□□□□ 0.71
IRF9-214ENST00000561412 RIMBP3BA6NNM3 1639 aa19.49■□□□□ 0.71
IRF9-214ENST00000561412 RIMBP3Q9UFD9 1639 aa19.49■□□□□ 0.71
IRF9-214ENST00000561412 ZNF608Q9ULD9 1512 aaPredicted RBP19.44■□□□□ 0.7
IRF9-214ENST00000561412 RSF1Q96T23 1441 aaPredicted RBP19.42■□□□□ 0.7
IRF9-214ENST00000561412 TOP2AP11388 1531 aaKnown RBP19.39■□□□□ 0.69
IRF9-214ENST00000561412 ARHGEF11O15085 1522 aa19.37■□□□□ 0.69
IRF9-214ENST00000561412 IFT140Q96RY7 1462 aa19.28■□□□□ 0.68
IRF9-214ENST00000561412 CYB5RLQ6IPT4 315 aa19.27■□□□□ 0.68
IRF9-214ENST00000561412 PRDM2Q13029 1718 aa19.27■□□□□ 0.68
IRF9-214ENST00000561412 TOPBP1Q92547 1522 aa19.25■□□□□ 0.67
IRF9-214ENST00000561412 EIF4G3O43432 1585 aaKnown RBP19.23■□□□□ 0.67
IRF9-214ENST00000561412 CCDC88BA6NC98 1476 aa19.22■□□□□ 0.67
IRF9-214ENST00000561412 ARAP1Q96P48 1450 aa19.19■□□□□ 0.66
IRF9-214ENST00000561412 AQRO60306 1485 aaKnown RBP eCLIP19.18■□□□□ 0.66
IRF9-214ENST00000561412 CHD1O14646 1710 aa19.18■□□□□ 0.66
IRF9-214ENST00000561412 TRHP20396 242 aaPredicted RBP19.14■□□□□ 0.65
IRF9-214ENST00000561412 TARBP1Q13395 1621 aaKnown RBP19.13■□□□□ 0.65
IRF9-214ENST00000561412 DNMBPQ6XZF7 1577 aa19.1■□□□□ 0.65
IRF9-214ENST00000561412 FBLN2P98095 1184 aa19.08■□□□□ 0.64
IRF9-214ENST00000561412 POLA1P09884 1462 aaPredicted RBP19.04■□□□□ 0.64
IRF9-214ENST00000561412 RAD54L2Q9Y4B4 1467 aa19.03■□□□□ 0.64
IRF9-214ENST00000561412 ABCC8Q09428 1581 aa19.02■□□□□ 0.64
IRF9-214ENST00000561412 TDRD9Q8NDG6 1382 aaKnown RBP18.99■□□□□ 0.63
IRF9-214ENST00000561412 SNAPC4Q5SXM2 1469 aa18.94■□□□□ 0.62
IRF9-214ENST00000561412 CLASP1Q7Z460 1538 aa18.94■□□□□ 0.62
IRF9-214ENST00000561412 SOGA1O94964 1423 aa18.9■□□□□ 0.62
IRF9-214ENST00000561412 FGD5Q6ZNL6 1462 aa18.86■□□□□ 0.61
IRF9-214ENST00000561412 CHMP7Q8WUX9 453 aaPredicted RBP18.82■□□□□ 0.6
IRF9-214ENST00000561412 CUX1P39880 1505 aa18.81■□□□□ 0.6
IRF9-214ENST00000561412 SYNJ1O43426 1573 aa18.81■□□□□ 0.6
IRF9-214ENST00000561412 AEBP2Q6ZN18 517 aaPredicted RBP18.8■□□□□ 0.6
IRF9-214ENST00000561412 MAGI1Q96QZ7 1491 aaPredicted RBP18.77■□□□□ 0.6
IRF9-214ENST00000561412 GRIN2BQ13224 1484 aa18.76■□□□□ 0.59
IRF9-214ENST00000561412 SYNJ2O15056 1496 aa18.75■□□□□ 0.59
IRF9-214ENST00000561412 GAPVD1Q14C86 1478 aa18.75■□□□□ 0.59
IRF9-214ENST00000561412 WDR97A6NE52 1622 aa18.74■□□□□ 0.59
IRF9-214ENST00000561412 ERCC6L2Q5T890 1561 aa18.73■□□□□ 0.59
IRF9-214ENST00000561412 PBRM1Q86U86 1689 aa18.69■□□□□ 0.58
IRF9-214ENST00000561412 ABCA5Q8WWZ7 1642 aa18.62■□□□□ 0.57
IRF9-214ENST00000561412 ABCA10Q8WWZ4 1543 aa18.57■□□□□ 0.56
IRF9-214ENST00000561412 CEP170Q5SW79 1584 aa18.56■□□□□ 0.56
IRF9-214ENST00000561412 GRIN2AQ12879 1464 aa18.56■□□□□ 0.56
IRF9-214ENST00000561412 NUP160Q12769 1436 aa18.51■□□□□ 0.55
IRF9-214ENST00000561412 ADAMTS12P58397 1594 aa18.51■□□□□ 0.55
IRF9-214ENST00000561412 KIF13AQ9H1H9 1805 aa18.5■□□□□ 0.55
IRF9-214ENST00000561412 SHROOM2Q13796 1616 aa18.47■□□□□ 0.55
IRF9-214ENST00000561412 FHAD1B1AJZ9 1412 aa18.39■□□□□ 0.53
IRF9-214ENST00000561412 WRNQ14191 1432 aaPredicted RBP eCLIP18.39■□□□□ 0.53
IRF9-214ENST00000561412 PRG4Q92954 1404 aaPredicted RBP18.37■□□□□ 0.53
IRF9-214ENST00000561412 BIVM-ERCC5R4GMW8 1640 aa18.34■□□□□ 0.53
IRF9-214ENST00000561412 TOP2BQ02880 1626 aa18.33■□□□□ 0.52
IRF9-214ENST00000561412 FAM69CQ0P6D2 419 aa18.31■□□□□ 0.52
IRF9-214ENST00000561412 JPH4Q96JJ6 628 aa18.3■□□□□ 0.52
IRF9-214ENST00000561412 ERICH3Q5RHP9 1530 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms